Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:11 (4095): wrapper (7.7.26015): starting
01:53:11 (4095): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 01:53:12] Arguments: --nthreads 8
[2026-03-13 01:53:12] Threads: 8
[2026-03-13 01:53:12] Checking for CVMFS
[2026-03-13 01:53:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 01:53:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 01:53:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 01:53:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 01:53:16] 2.11.2.0 15043 125423 133504 157221 2 54 20586742 25165825 4784 130560 153 43363598 99.837 33652954 1112 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 01:53:16] CVMFS is ok
[2026-03-13 01:53:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 01:53:16] Checking for apptainer binary...
[2026-03-13 01:53:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 01:53:16] Running /usr/bin/apptainer --version
[2026-03-13 01:53:16] apptainer version 1.3.2-1.el7
[2026-03-13 01:53:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 01:53:26] cg-vwn492.simple-grid.lan
[2026-03-13 01:53:26] apptainer works
[2026-03-13 01:53:26] Set ATHENA_PROC_NUMBER=8
[2026-03-13 01:53:26] Set ATHENA_CORE_NUMBER=8
[2026-03-13 01:53:26] Starting ATLAS job with PandaID=7051746318
[2026-03-13 01:53:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 06:39:38]  *** The last 200 lines of the pilot log: ***
[2026-03-13 06:39:38] 2026-03-13 05:38:34,434 | INFO     | total number of processed events: 400 (read)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,436 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-7051746318/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,437 | INFO     | extracted standard info from prmon json
[2026-03-13 06:39:38] 2026-03-13 05:38:34,437 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 06:39:38] 2026-03-13 05:38:34,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 06:39:38] 2026-03-13 05:38:34,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 06:39:38] 2026-03-13 05:38:34,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 06:39:38] 2026-03-13 05:38:34,443 | INFO     | fitting pss+swap vs Time
[2026-03-13 06:39:38] 2026-03-13 05:38:34,444 | INFO     | sum of square deviations: 6171352920.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,446 | INFO     | sum of deviations: 101318513457.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,446 | INFO     | mean x: 1773372016.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,447 | INFO     | mean y: 2435004.4243542436
[2026-03-13 06:39:38] 2026-03-13 05:38:34,447 | INFO     | intersect: -29111994002.718414
[2026-03-13 06:39:38] 2026-03-13 05:38:34,447 | INFO     | chi2: 5.789639896763158
[2026-03-13 06:39:38] 2026-03-13 05:38:34,448 | INFO     | sum of square deviations: 5836025702.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,450 | INFO     | sum of deviations: 117200573039.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,450 | INFO     | mean x: 1773371863.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,451 | INFO     | mean y: 2442105.0263157897
[2026-03-13 06:39:38] 2026-03-13 05:38:34,451 | INFO     | intersect: -35610868940.75827
[2026-03-13 06:39:38] 2026-03-13 05:38:34,454 | INFO     | chi2: 5.047367396770884
[2026-03-13 06:39:38] 2026-03-13 05:38:34,455 | INFO     | current chi2=5.047367396770884 (change=12.820702379214637 %)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,455 | INFO     | right removable region: 265
[2026-03-13 06:39:38] 2026-03-13 05:38:34,455 | INFO     | sum of square deviations: 5836025702.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,458 | INFO     | sum of deviations: 10871260027.500008
[2026-03-13 06:39:38] 2026-03-13 05:38:34,458 | INFO     | mean x: 1773372168.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,458 | INFO     | mean y: 2476104.161654135
[2026-03-13 06:39:38] 2026-03-13 05:38:34,458 | INFO     | intersect: -3300934633.223641
[2026-03-13 06:39:38] 2026-03-13 05:38:34,459 | INFO     | chi2: 1.45302762400611
[2026-03-13 06:39:38] 2026-03-13 05:38:34,459 | INFO     | current chi2=1.45302762400611 (change=74.90297065248458 %)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,460 | INFO     | sum of square deviations: 5513070810.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,462 | INFO     | sum of deviations: -17518294089.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,462 | INFO     | mean x: 1773372321.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,462 | INFO     | mean y: 2489401.5938697318
[2026-03-13 06:39:38] 2026-03-13 05:38:34,463 | INFO     | intersect: 5637544513.20607
[2026-03-13 06:39:38] 2026-03-13 05:38:34,463 | INFO     | chi2: 0.8084939004808578
[2026-03-13 06:39:38] 2026-03-13 05:38:34,463 | INFO     | current chi2=0.8084939004808578 (change=44.357981422832324 %)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,464 | INFO     | sum of square deviations: 5202255680.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,466 | INFO     | sum of deviations: -20122707053.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,466 | INFO     | mean x: 1773372473.5
[2026-03-13 06:39:38] 2026-03-13 05:38:34,466 | INFO     | mean y: 2490677.80859375
[2026-03-13 06:39:38] 2026-03-13 05:38:34,467 | INFO     | intersect: 6862025651.872228
[2026-03-13 06:39:38] 2026-03-13 05:38:34,467 | INFO     | chi2: 0.8037126700543851
[2026-03-13 06:39:38] 2026-03-13 05:38:34,467 | INFO     | current chi2=0.8037126700543851 (change=0.591374953308744 %)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,467 | INFO     | left removable region: 30
[2026-03-13 06:39:38] 2026-03-13 05:38:34,468 | INFO     | sum of square deviations: 4024149870.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,470 | INFO     | sum of deviations: -4433433579.000001
[2026-03-13 06:39:38] 2026-03-13 05:38:34,470 | INFO     | mean x: 1773372748.0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,470 | INFO     | mean y: 2500105.119148936
[2026-03-13 06:39:38] 2026-03-13 05:38:34,470 | INFO     | intersect: 1956237054.0530877
[2026-03-13 06:39:38] 2026-03-13 05:38:34,471 | INFO     | chi2: 0.00699820724843846
[2026-03-13 06:39:38] 2026-03-13 05:38:34,471 | INFO     | current memory leak: -1.10 B/s (using 235 data points, chi2=0.01)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,471 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | ..............................
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . Timing measurements:
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . get job = 0 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . initial setup = 109 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . payload setup = 116 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . stage-in = 0 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . payload execution = 16635 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,472 | INFO     | . stage-out = 3 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,473 | INFO     | . log creation = 1 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,473 | INFO     | ..............................
[2026-03-13 06:39:38] 2026-03-13 05:38:34,601 | INFO     | 
[2026-03-13 06:39:38] 2026-03-13 05:38:34,601 | INFO     | job summary report
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | --------------------------------------------------
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | PanDA job id: 7051746318
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | task id: 48967094
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | errors: (none)
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | pilot state: finished 
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | transexitcode: 0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | exeerrorcode: 0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,602 | INFO     | exeerrordiag: 
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | exitcode: 0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | exitmsg: OK
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | cpuconsumptiontime: 64612 s
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | nevents: 400
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | neventsw: 0
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | pid: 12773
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | pgrp: 12773
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | corecount: 8
[2026-03-13 06:39:38] 2026-03-13 05:38:34,603 | INFO     | event service: False
[2026-03-13 06:39:38] 2026-03-13 05:38:34,604 | INFO     | sizes: {0: 2279736, 1: 2280193, 2: 2280253, 12: 2280281, 16756: 2312069, 16760: 2321069, 16762: 2321253, 16764: 2321447}
[2026-03-13 06:39:38] 2026-03-13 05:38:34,604 | INFO     | --------------------------------------------------
[2026-03-13 06:39:38] 2026-03-13 05:38:34,604 | INFO     | 
[2026-03-13 06:39:38] 2026-03-13 05:38:34,604 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-03-13 06:39:38] 2026-03-13 05:38:35,108 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,108 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,108 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,110 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 06:39:38] 2026-03-13 05:38:35,111 | INFO     | job 7051746318 has completed (purged errors)
[2026-03-13 06:39:38] 2026-03-13 05:38:35,111 | INFO     | overall cleanup function is called
[2026-03-13 06:39:38] 2026-03-13 05:38:35,456 | INFO     | PID=8215 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 06:39:38] 2026-03-13 05:38:35,456 | INFO     | .. there are 9 such processes running
[2026-03-13 06:39:38] 2026-03-13 05:38:36,119 | INFO     | --- collectZombieJob: --- 10, [12773]
[2026-03-13 06:39:38] 2026-03-13 05:38:36,119 | INFO     | zombie collector waiting for pid 12773
[2026-03-13 06:39:38] 2026-03-13 05:38:36,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 06:39:38] 2026-03-13 05:38:36,120 | INFO     | collected zombie processes
[2026-03-13 06:39:38] 2026-03-13 05:38:36,120 | INFO     | will attempt to kill all subprocesses of pid=12773
[2026-03-13 06:39:38] 2026-03-13 05:38:36,230 | INFO     | process IDs to be killed: [12773] (in reverse order)
[2026-03-13 06:39:38] 2026-03-13 05:38:36,923 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 06:39:38] 2026-03-13 05:38:36,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 06:39:38] 2026-03-13 05:38:36,926 | INFO     | did not find any defunct processes belonging to 12773
[2026-03-13 06:39:38] 2026-03-13 05:38:36,929 | INFO     | did not find any defunct processes belonging to 12773
[2026-03-13 06:39:38] 2026-03-13 05:38:36,929 | INFO     | ready for new job
[2026-03-13 06:39:38] 2026-03-13 05:38:36,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 06:39:38] 2026-03-13 05:38:36,931 | INFO     | **************************************
[2026-03-13 06:39:38] 2026-03-13 05:38:36,931 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 06:39:38] 2026-03-13 05:38:36,931 | INFO     | **************************************
[2026-03-13 06:39:38] 2026-03-13 05:38:36,931 | INFO     | 
[2026-03-13 06:39:38] 2026-03-13 05:38:36,932 | INFO     | pilot is running in a VM
[2026-03-13 06:39:38] 2026-03-13 05:38:36,932 | INFO     | architecture information:
[2026-03-13 06:39:38] 2026-03-13 05:38:36,941 | INFO     | executing command: cat /etc/os-release
[2026-03-13 06:39:38] 2026-03-13 05:38:37,178 | INFO     | cat /etc/os-release:
[2026-03-13 06:39:38] NAME="CentOS Linux"
[2026-03-13 06:39:38] VERSION="7 (Core)"
[2026-03-13 06:39:38] ID="centos"
[2026-03-13 06:39:38] ID_LIKE="rhel fedora"
[2026-03-13 06:39:38] VERSION_ID="7"
[2026-03-13 06:39:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 06:39:38] ANSI_COLOR="0;31"
[2026-03-13 06:39:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 06:39:38] HOME_URL="https://www.centos.org/"
[2026-03-13 06:39:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 06:39:38] 
[2026-03-13 06:39:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 06:39:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 06:39:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 06:39:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 06:39:38] 
[2026-03-13 06:39:38] 2026-03-13 05:38:37,178 | INFO     | **************************************
[2026-03-13 06:39:38] 2026-03-13 05:38:37,681 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-03-13 06:39:38] 2026-03-13 05:38:37,958 | INFO     | sufficient remaining disk space (495776169984 B)
[2026-03-13 06:39:38] 2026-03-13 05:38:37,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 06:39:38] 2026-03-13 05:38:37,958 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 06:39:38] 2026-03-13 05:38:37,958 | INFO     | update_server=False
[2026-03-13 06:39:38] 2026-03-13 05:38:37,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 06:39:38] 2026-03-13 05:38:37,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 06:39:38] 2026-03-13 05:38:37,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 06:39:38] 2026-03-13 05:38:37,959 | INFO     | aborting loop
[2026-03-13 06:39:38] 2026-03-13 05:38:38,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 06:39:38] 2026-03-13 05:38:38,457 | INFO     | all payload control threads have been joined
[2026-03-13 06:39:38] 2026-03-13 05:38:38,753 | INFO     | all data control threads have been joined
[2026-03-13 06:39:38] 2026-03-13 05:38:38,964 | INFO     | [job] retrieve thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:38,965 | INFO     | [job] job monitor thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:38,977 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,068 | INFO     | all job control threads have been joined
[2026-03-13 06:39:38] 2026-03-13 05:38:39,189 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,224 | INFO     | [payload] failed_post thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,463 | INFO     | [payload] control thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 06:39:38] 2026-03-13 05:38:39,680 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,759 | INFO     | [data] control thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:39,966 | INFO     | [data] copytool_out thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:40,030 | INFO     | [data] copytool_in thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:40,074 | INFO     | [job] control thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:40,092 | INFO     | [payload] validate_post thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:40,112 | INFO     | [job] validate thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:40,621 | INFO     | [job] queue monitor thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:38:42,081 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 06:39:38] 2026-03-13 05:39:07,624 | INFO     | PID=8215 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 06:39:38] 2026-03-13 05:39:07,625 | INFO     | .. there are 9 such processes running
[2026-03-13 06:39:38] 2026-03-13 05:39:07,626 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 06:39:38] 2026-03-13 05:39:07,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 06:39:38] 2026-03-13 05:39:07,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 06:39:38] 2026-03-13 05:39:26,356 | INFO     | [monitor] cgroup control has ended
[2026-03-13 06:39:38] 2026-03-13 05:39:28,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140103935526720)>', '<ExcThread(monitor, started 140102965651200)>']
[2026-03-13 06:39:38] 2026-03-13 05:39:28,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 06:39:38] 2026-03-13 05:39:28,753 | INFO     | [monitor] control thread has ended
[2026-03-13 06:39:38] 2026-03-13 05:39:33,150 | INFO     | all workflow threads have been joined
[2026-03-13 06:39:38] 2026-03-13 05:39:33,150 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 06:39:38] 2026-03-13 05:39:33,151 | INFO     | traces error code: 0
[2026-03-13 06:39:38] 2026-03-13 05:39:33,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 06:39:38] 2026-03-13 05:39:33,515 [wrapper] ==== pilot stdout END ====
[2026-03-13 06:39:38] 2026-03-13 05:39:33,609 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 06:39:38] 2026-03-13 05:39:33,726 [wrapper] pilotpid: 8215
[2026-03-13 06:39:38] 2026-03-13 05:39:33,836 [wrapper] Pilot exit status: 0
[2026-03-13 06:39:38] 2026-03-13 05:39:34,266 [wrapper] pandaids: 7051746318
[2026-03-13 06:39:38] 2026-03-13 05:39:35,140 [wrapper] cleanup supervisor_pilot 21161 8216
[2026-03-13 06:39:38] 2026-03-13 05:39:35,254 [wrapper] Test setup, not cleaning
[2026-03-13 06:39:38] 2026-03-13 05:39:35,359 [wrapper] apfmon messages muted
[2026-03-13 06:39:38] 2026-03-13 05:39:35,451 [wrapper] ==== wrapper stdout END ====
[2026-03-13 06:39:38] 2026-03-13 05:39:35,557 [wrapper] ==== wrapper stderr END ====
[2026-03-13 06:39:38]  *** Error codes and diagnostics ***
[2026-03-13 06:39:38]     "exeErrorCode": 0,
[2026-03-13 06:39:38]     "exeErrorDiag": "",
[2026-03-13 06:39:38]     "pilotErrorCode": 0,
[2026-03-13 06:39:38]     "pilotErrorDiag": "",
[2026-03-13 06:39:38]  *** Listing of results directory ***
[2026-03-13 06:39:38] total 418828
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc    585013 Mar 12 13:11 pilot3.tar.gz
[2026-03-13 06:39:38] -rwx------. 1 boinc boinc     36322 Mar 12 13:11 runpilot2-wrapper.sh
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc      5111 Mar 12 13:12 queuedata.json
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc       100 Mar 13 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 06:39:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 01:53 run_atlas
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc       105 Mar 13 01:53 job.xml
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc      6392 Mar 13 01:53 init_data.xml
[2026-03-13 06:39:38] -rw-r--r--. 2 boinc boinc 218202578 Mar 13 01:53 EVNT.48967092._000304.pool.root.1
[2026-03-13 06:39:38] -rw-r--r--. 2 boinc boinc     15845 Mar 13 01:53 start_atlas.sh
[2026-03-13 06:39:38] drwxrwx--x. 2 boinc boinc        68 Mar 13 01:53 shared
[2026-03-13 06:39:38] -rw-r--r--. 2 boinc boinc    597532 Mar 13 01:53 input.tar.gz
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc         0 Mar 13 01:53 boinc_lockfile
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc      2597 Mar 13 01:53 pandaJob.out
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc       415 Mar 13 01:58 workernode_map.json
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc   1006522 Mar 13 01:58 agis_schedconf.cvmfs.json
[2026-03-13 06:39:38] drwx------. 5 boinc boinc      4096 Mar 13 01:58 pilot3
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc 201049752 Mar 13 06:37 HITS.48967094._007455.pool.root.1
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc       530 Mar 13 06:37 boinc_task_state.xml
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc      1027 Mar 13 06:38 memory_monitor_summary.json
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc   1511578 Mar 13 06:38 agis_ddmendpoints.agis.ALL.json
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc    510250 Mar 13 06:38 log.48967094._007455.job.log.tgz.1
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc      6321 Mar 13 06:38 heartbeat.json
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc        95 Mar 13 06:39 pilot_heartbeat.json
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc      8192 Mar 13 06:39 boinc_mmap_file
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc      4880 Mar 13 06:39 pilotlog.txt
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc        28 Mar 13 06:39 wrapper_checkpoint.txt
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc   2343010 Mar 13 06:39 log.48967094._007455.job.log.1
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc       357 Mar 13 06:39 output.list
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc       620 Mar 13 06:39 runtime_log
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc   2867200 Mar 13 06:39 result.tar.gz
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc       656 Mar 13 06:39 Z1jNDmP4tK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmO3jLDmYbIQNo.diag
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc      8832 Mar 13 06:39 runtime_log.err
[2026-03-13 06:39:38] -rw-r--r--. 1 boinc boinc     20805 Mar 13 06:39 stderr.txt
[2026-03-13 06:39:38] HITS file was successfully produced:
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc 201049752 Mar 13 06:37 shared/HITS.pool.root.1
[2026-03-13 06:39:38]  *** Contents of shared directory: ***
[2026-03-13 06:39:38] total 412832
[2026-03-13 06:39:38] -rw-r--r--. 2 boinc boinc 218202578 Mar 13 01:53 ATLAS.root_0
[2026-03-13 06:39:38] -rw-r--r--. 2 boinc boinc     15845 Mar 13 01:53 start_atlas.sh
[2026-03-13 06:39:38] -rw-r--r--. 2 boinc boinc    597532 Mar 13 01:53 input.tar.gz
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc 201049752 Mar 13 06:37 HITS.pool.root.1
[2026-03-13 06:39:38] -rw-------. 1 boinc boinc   2867200 Mar 13 06:39 result.tar.gz
06:39:39 (4095): run_atlas exited; CPU time 64859.801142
06:39:39 (4095): called boinc_finish(0)

</stderr_txt>
]]>

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