Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-12 15:39:37 (10764): vboxwrapper version 26210
2026-03-12 15:39:37 (10764): BOINC client version: 7.20.2
2026-03-12 15:39:38 (10764): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-03-12 15:39:38 (10764): Successfully copied 'init_data.xml' to the shared directory.
2026-03-12 15:39:39 (10764): Create VM. (boinc_38ef5789bd84d21e, slot#3)
2026-03-12 15:39:39 (10764): Setting Memory Size for VM. (4400MB)
2026-03-12 15:39:39 (10764): Setting CPU Count for VM. (4)
2026-03-12 15:39:40 (10764): Setting Chipset Options for VM.
2026-03-12 15:39:40 (10764): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-12 15:39:40 (10764): Setting Boot Options for VM.
2026-03-12 15:39:41 (10764): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-12 15:39:41 (10764): Enabling VM Network Access.
2026-03-12 15:39:41 (10764): Disabling USB Support for VM.
2026-03-12 15:39:42 (10764): Disabling COM Port Support for VM.
2026-03-12 15:39:42 (10764): Disabling LPT Port Support for VM.
2026-03-12 15:39:42 (10764): Disabling Audio Support for VM.
2026-03-12 15:39:42 (10764): Disabling Clipboard Support for VM.
2026-03-12 15:39:43 (10764): Disabling Drag and Drop Support for VM.
2026-03-12 15:39:43 (10764): Adding storage controller(s) to VM.
2026-03-12 15:39:43 (10764): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-12 15:39:44 (10764): Adding VirtualBox Guest Additions to VM.
2026-03-12 15:39:45 (10764): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-12 15:39:45 (10764): forwarding host port 48661 to guest port 80
2026-03-12 15:39:45 (10764): Enabling remote desktop for VM.
2026-03-12 15:39:45 (10764): Required extension pack not installed, remote desktop not enabled.
2026-03-12 15:39:45 (10764): Enabling shared directory for VM.
2026-03-12 15:39:46 (10764): Starting VM using VBoxManage interface. (boinc_38ef5789bd84d21e, slot#3)
2026-03-12 15:39:52 (10764): Successfully started VM. (PID = '11532')
2026-03-12 15:39:52 (10764): Reporting VM Process ID to BOINC.
2026-03-12 15:39:52 (10764): Guest Log: BIOS: VirtualBox 6.1.34
2026-03-12 15:39:52 (10764): Guest Log: CPUID EDX: 0x178bfbff
2026-03-12 15:39:52 (10764): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-12 15:39:52 (10764): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-12 15:39:52 (10764): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-12 15:39:52 (10764): Detected: Web Application Enabled (http://localhost:48661)
2026-03-12 15:39:52 (10764): Preference change detected
2026-03-12 15:39:52 (10764): Setting CPU throttle for VM. (100%)
2026-03-12 15:39:52 (10764): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-12 15:39:54 (10764): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-12 15:39:54 (10764): Guest Log: BIOS: Booting from Hard Disk...
2026-03-12 15:39:57 (10764): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-12 15:39:57 (10764): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-12 15:39:57 (10764): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-12 15:40:05 (10764): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-12 15:40:05 (10764): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-12 15:40:16 (10764): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000252 main     Log opened 2026-03-12T15:40:13.933424000Z
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000398 main     OS Product: Linux
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000454 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000504 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000555 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000557 main     Process ID: 1285
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.000558 main     Package type: LINUX_64BITS_GENERIC
2026-03-12 15:40:16 (10764): Guest Log: 00:00:00.002340 main     5.2.32 r132073 started. Verbose level = 0
2026-03-12 15:40:16 (10764): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-12 15:40:16 (10764): Guest Log: [INFO] Mounting shared directory
2026-03-12 15:40:16 (10764): Guest Log: [INFO] Checking for init_data.xml
2026-03-12 15:40:21 (10764): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-12 15:40:21 (10764): Guest Log: [INFO] Detected branch: prod
2026-03-12 15:40:21 (10764): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-12 15:40:21 (10764): Guest Log: Copying input files
2026-03-12 15:40:23 (10764): Guest Log: Copied input files into RunAtlas.
2026-03-12 15:40:23 (10764): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-12 15:40:23 (10764): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-12 15:40:23 (10764): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-12 15:40:23 (10764): Guest Log: Further information can be found at the LHC@home message board.
2026-03-12 15:40:26 (10764): Guest Log: 00:00:10.032502 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 744 223 000ns (GuestNow=1 773 344 425 682 418 000 ns GuestLast=1 773 330 013 938 195 000 ns fSetTimeLastLoop=true )
2026-03-12 15:40:33 (10764): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-12 15:40:33 (10764): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-12 15:40:33 (10764): Guest Log: 2.6.3.0 1561 0 32160 157213 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-12 15:40:34 (10764): Guest Log: copied the webapp to /var/www
2026-03-12 15:40:34 (10764): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-12 15:40:34 (10764): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-12 15:40:34 (10764): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-12 15:40:34 (10764): Guest Log:  *** Starting ATLAS job. (PandaID=7051678091 taskID=48967059) ***
2026-03-12 17:27:20 (10764): Status Report: Elapsed Time: '6000.145031'
2026-03-12 17:27:20 (10764): Status Report: CPU Time: '21361.390625'
2026-03-12 19:14:32 (10764): Status Report: Elapsed Time: '12001.136208'
2026-03-12 19:14:32 (10764): Status Report: CPU Time: '46772.890625'
2026-03-12 21:06:40 (10764): Status Report: Elapsed Time: '18001.409771'
2026-03-12 21:06:40 (10764): Status Report: CPU Time: '73397.421875'
2026-03-12 22:57:40 (10764): Status Report: Elapsed Time: '24001.673512'
2026-03-12 22:57:40 (10764): Status Report: CPU Time: '99765.750000'
2026-03-13 00:46:44 (10764): Status Report: Elapsed Time: '30001.800093'
2026-03-13 00:46:45 (10764): Status Report: CPU Time: '125697.687500'
2026-03-13 00:47:10 (10764): Preference change detected
2026-03-13 00:47:10 (10764): Setting CPU throttle for VM. (100%)
2026-03-13 00:47:37 (10764): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-13 02:38:19 (10764): Status Report: Elapsed Time: '36002.300310'
2026-03-13 02:38:19 (10764): Status Report: CPU Time: '152213.109375'
2026-03-13 04:33:10 (10764): Status Report: Elapsed Time: '42002.655109'
2026-03-13 04:33:10 (10764): Status Report: CPU Time: '179533.140625'
2026-03-13 06:20:07 (10764): Status Report: Elapsed Time: '48003.375910'
2026-03-13 06:20:07 (10764): Status Report: CPU Time: '204906.796875'
2026-03-13 06:44:45 (10764): Guest Log:  *** Job finished ***
2026-03-13 06:44:45 (10764): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:34,939 | INFO     | all workflow threads have been joined
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:34,940 | INFO     | end of generic workflow (traces error code: 0)
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:34,940 | INFO     | traces error code: 0
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:34,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,426 | INFO     | PID=5965 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,427 | INFO     | found 0 job(s) in 20 queues
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,427 | INFO     | [monitor] control thread has ended
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,573 [wrapper] ==== pilot stdout END ====
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,580 [wrapper] ==== wrapper stdout RESUME ====
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,587 [wrapper] pilotpid: 5965
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,594 [wrapper] Pilot exit status: 0
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,662 [wrapper] pandaids: 7051678091
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,714 [wrapper] cleanup supervisor_pilot  8492 5966
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,728 [wrapper] Test setup, not cleaning
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,735 [wrapper] apfmon messages muted
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,743 [wrapper] ==== wrapper stdout END ====
2026-03-13 06:44:45 (10764): Guest Log: 2026-03-13 10:44:44,749 [wrapper] ==== wrapper stderr END ====
2026-03-13 06:44:45 (10764): Guest Log:  *** Error codes and diagnostics ***
2026-03-13 06:44:45 (10764): Guest Log:     "exeErrorCode": 0,
2026-03-13 06:44:45 (10764): Guest Log:     "exeErrorDiag": "",
2026-03-13 06:44:45 (10764): Guest Log:     "pilotErrorCode": 0,
2026-03-13 06:44:45 (10764): Guest Log:     "pilotErrorDiag": "",
2026-03-13 06:44:45 (10764): Guest Log:  *** Listing of results directory ***
2026-03-13 06:44:45 (10764): Guest Log: total 278884
2026-03-13 06:44:45 (10764): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 12 10:55 pilot3.tar.gz
2026-03-13 06:44:45 (10764): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 12 11:24 queuedata.json
2026-03-13 06:44:45 (10764): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 12 11:24 runpilot2-wrapper.sh
2026-03-13 06:44:45 (10764): Guest Log: -rwxr-xr-x. 1 atlas atlas      7899 Mar 12 19:40 init_data.xml
2026-03-13 06:44:45 (10764): Guest Log: -rwxr-xr-x. 1 atlas atlas    597518 Mar 12 19:40 input.tar.gz
2026-03-13 06:44:45 (10764): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 12 19:40 start_atlas.sh
2026-03-13 06:44:45 (10764): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 12 19:40 EVNT.48967057._000119.pool.root.1 -> /data/./ATLAS.root_0
2026-03-13 06:44:45 (10764): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Mar 12 19:40 pandaJob.out
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas   1006522 Mar 12 19:41 agis_schedconf.cvmfs.json
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas       426 Mar 12 19:41 workernode_map.json
2026-03-13 06:44:45 (10764): Guest Log: drwx------. 5 atlas atlas      4096 Mar 12 19:41 pilot3
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas 265011429 Mar 13 10:42 HITS.48967059._003091.pool.root.1
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 13 10:43 memory_monitor_summary.json
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 13 10:44 agis_ddmendpoints.agis.ALL.json
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas    934514 Mar 13 10:44 log.48967059._003091.job.log.tgz.1
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas        95 Mar 13 10:44 pilot_heartbeat.json
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas      6363 Mar 13 10:44 heartbeat.json
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas       744 Mar 13 10:44 pilotlog.txt
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas   7417125 Mar 13 10:44 log.48967059._003091.job.log.1
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas       357 Mar 13 10:44 output.list
2026-03-13 06:44:45 (10764): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 13 10:44 runtime_log
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas   8366080 Mar 13 10:44 result.tar.gz
2026-03-13 06:44:45 (10764): Guest Log: -rw-r--r--. 1 atlas atlas      8785 Mar 13 10:44 runtime_log.err
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas       670 Mar 13 10:44 OCIMDmrKtK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOzjLDmuTg4km.diag
2026-03-13 06:44:45 (10764): Guest Log: Looking for outputfile HITS.48967059._003091.pool.root.1
2026-03-13 06:44:45 (10764): Guest Log: HITS file was successfully produced
2026-03-13 06:44:45 (10764): Guest Log: -rw-------. 1 atlas atlas 265011429 Mar 13 10:42 /home/atlas/RunAtlas/HITS.48967059._003091.pool.root.1
2026-03-13 06:44:47 (10764): Guest Log: Successfully finished the ATLAS job!
2026-03-13 06:44:47 (10764): Guest Log: Copying the results back to the shared directory!
2026-03-13 06:44:47 (10764): Guest Log:  *** Contents of shared directory: ***
2026-03-13 06:44:48 (10764): Guest Log: total 490124
2026-03-13 06:44:48 (10764): Guest Log: -rwxrwxrwx. 1 root root 227879765 Mar 12 19:39 ATLAS.root_0
2026-03-13 06:44:48 (10764): Guest Log: -rwxrwxrwx. 1 root root 265011429 Mar 13 10:44 HITS.pool.root.1
2026-03-13 06:44:48 (10764): Guest Log: -rwxrwxrwx. 1 root root      7899 Mar 12 19:39 init_data.xml
2026-03-13 06:44:48 (10764): Guest Log: -rwxrwxrwx. 1 root root    597518 Mar 12 16:48 input.tar.gz
2026-03-13 06:44:48 (10764): Guest Log: -rwxrwxrwx. 1 root root   8366080 Mar 13 10:44 result.tar.gz
2026-03-13 06:44:48 (10764): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 12 16:48 start_atlas.sh
2026-03-13 06:44:48 (10764): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-13 06:44:48 (10764): VM Completion File Detected.
2026-03-13 06:44:48 (10764): Powering off VM.
2026-03-13 06:44:50 (10764): Successfully stopped VM.
2026-03-13 06:44:50 (10764): Deregistering VM. (boinc_38ef5789bd84d21e, slot#3)
2026-03-13 06:44:50 (10764): Removing network bandwidth throttle group from VM.
2026-03-13 06:44:50 (10764): Removing VM from VirtualBox.
2026-03-13 06:44:55 (10764): called boinc_finish(0)

</stderr_txt>
]]>

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