Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:02 (1228178): wrapper (7.7.26015): starting
12:36:02 (1228178): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 12:36:02] Arguments: --nthreads 8
[2026-03-12 12:36:02] Threads: 8
[2026-03-12 12:36:02] Checking for CVMFS
[2026-03-12 12:36:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 12:36:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 12:36:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 12:36:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 12:36:05] 2.13.3.0 8127 34395 281620 157208 3 586 33928337 40960000 74235 16776704 0 332179315 99.771 190321913 37555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 12:36:05] CVMFS is ok
[2026-03-12 12:36:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 12:36:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 12:36:05] Further information can be found at the LHC@home message board.
[2026-03-12 12:36:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 12:36:05] Checking for apptainer binary...
[2026-03-12 12:36:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 12:36:05] Running /usr/bin/apptainer --version
[2026-03-12 12:36:05] apptainer version 1.4.5-2.el9
[2026-03-12 12:36:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 12:36:06] c8-6-11.aglt2.org
[2026-03-12 12:36:06] apptainer works
[2026-03-12 12:36:06] Set ATHENA_PROC_NUMBER=8
[2026-03-12 12:36:06] Set ATHENA_CORE_NUMBER=8
[2026-03-12 12:36:07] Starting ATLAS job with PandaID=7043152381
[2026-03-12 12:36:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 14:48:31]  *** The last 200 lines of the pilot log: ***
[2026-03-12 14:48:31] 2026-03-12 18:47:47,730 | INFO     | reading metadata from: /tmp/boinchome/slots/6/PanDA_Pilot-7043152381/jobReport.json
[2026-03-12 14:48:31] 2026-03-12 18:47:47,732 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/6/workernode_map.json
[2026-03-12 14:48:31] 2026-03-12 18:47:47,732 | INFO     | this job has now completed (state=finished)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,732 | INFO     | log transfer has been attempted: DONE
[2026-03-12 14:48:31] 2026-03-12 18:47:47,732 | INFO     | job 7043152381 has finished - writing final server update
[2026-03-12 14:48:31] 2026-03-12 18:47:47,733 | INFO     | total number of processed events: 400 (read)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,761 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-7043152381/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,762 | INFO     | extracted standard info from prmon json
[2026-03-12 14:48:31] 2026-03-12 18:47:47,762 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 14:48:31] 2026-03-12 18:47:47,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 14:48:31] 2026-03-12 18:47:47,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 14:48:31] 2026-03-12 18:47:47,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 14:48:31] 2026-03-12 18:47:47,763 | INFO     | fitting pss+swap vs Time
[2026-03-12 14:48:31] 2026-03-12 18:47:47,763 | INFO     | sum of square deviations: 605594587.4879987
[2026-03-12 14:48:31] 2026-03-12 18:47:47,764 | INFO     | sum of deviations: 17564071823.832
[2026-03-12 14:48:31] 2026-03-12 18:47:47,764 | INFO     | mean x: 1773337451.064
[2026-03-12 14:48:31] 2026-03-12 18:47:47,764 | INFO     | mean y: 2438511.896
[2026-03-12 14:48:31] 2026-03-12 18:47:47,764 | INFO     | intersect: -51429702728.95766
[2026-03-12 14:48:31] 2026-03-12 18:47:47,764 | INFO     | chi2: 4.288414877978821
[2026-03-12 14:48:31] 2026-03-12 18:47:47,764 | INFO     | sum of square deviations: 535791067.4666666
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | sum of deviations: 24803170701.299988
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | mean x: 1773337298.5666666
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | mean y: 2453765.025
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | intersect: -82089970685.60779
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | chi2: 3.618352747318992
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | current chi2=3.618352747318992 (change=15.624937179017456 %)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | right removable region: 119
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | sum of square deviations: 535786187.4666666
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | sum of deviations: -16196370705.2
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | mean x: 1773337603.5666666
[2026-03-12 14:48:31] 2026-03-12 18:47:47,765 | INFO     | mean y: 2511914.15
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | intersect: 53609032359.6283
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | chi2: 1.1694446162738388
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | current chi2=1.1694446162738388 (change=72.73014273224862 %)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | sum of square deviations: 471566484.5739124
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | sum of deviations: -23009010033.565224
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | mean x: 1773337756.0608695
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | mean y: 2527778.652173913
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | intersect: 86528495074.59398
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | chi2: 0.9142838532383247
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | current chi2=0.9142838532383247 (change=21.818969405197148 %)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,766 | INFO     | left removable region: 20
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | sum of square deviations: 300845296.50505036
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | sum of deviations: -6177024095.121209
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | mean x: 1773337878.070707
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | mean y: 2522988.303030303
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | intersect: 36413099882.43104
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | chi2: 0.11111201435307579
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | current memory leak: -20.53 B/s (using 99 data points, chi2=0.11)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | ..............................
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | . Timing measurements:
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | . get job = 0 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | . initial setup = 53 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,767 | INFO     | . payload setup = 86 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,768 | INFO     | . stage-in = 0 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,768 | INFO     | . payload execution = 7642 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,768 | INFO     | . stage-out = 3 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,768 | INFO     | . log creation = 0 s
[2026-03-12 14:48:31] 2026-03-12 18:47:47,768 | INFO     | ..............................
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | 
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | job summary report
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | --------------------------------------------------
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | PanDA job id: 7043152381
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | task id: 48955006
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | errors: (none)
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | pilot state: finished 
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | transexitcode: 0
[2026-03-12 14:48:31] 2026-03-12 18:47:48,073 | INFO     | exeerrorcode: 0
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | exeerrordiag: 
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | exitcode: 0
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | exitmsg: OK
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | cpuconsumptiontime: 20411 s
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | nevents: 400
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | neventsw: 0
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | pid: 1307974
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | pgrp: 1307974
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | corecount: 8
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | event service: False
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | sizes: {0: 2279743, 1: 2279827, 2: 2280288, 3: 2280288, 7733: 2307800, 7737: 2316798, 7738: 2316982, 7739: 2317176}
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | --------------------------------------------------
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | 
[2026-03-12 14:48:31] 2026-03-12 18:47:48,074 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-03-12 14:48:31] 2026-03-12 18:47:48,145 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,145 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | job 7043152381 has completed (purged errors)
[2026-03-12 14:48:31] 2026-03-12 18:47:48,146 | INFO     | overall cleanup function is called
[2026-03-12 14:48:31] 2026-03-12 18:47:49,219 | INFO     | --- collectZombieJob: --- 10, [1307974]
[2026-03-12 14:48:31] 2026-03-12 18:47:49,219 | INFO     | zombie collector waiting for pid 1307974
[2026-03-12 14:48:31] 2026-03-12 18:47:49,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 14:48:31] 2026-03-12 18:47:49,219 | INFO     | collected zombie processes
[2026-03-12 14:48:31] 2026-03-12 18:47:49,219 | INFO     | will attempt to kill all subprocesses of pid=1307974
[2026-03-12 14:48:31] 2026-03-12 18:47:52,843 | INFO     | PID=1259483 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 14:48:31] 2026-03-12 18:47:52,843 | INFO     | .. there are 108 such processes running
[2026-03-12 14:48:31] 2026-03-12 18:47:52,970 | INFO     | process IDs to be killed: [1307974] (in reverse order)
[2026-03-12 14:48:31] 2026-03-12 18:47:55,159 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 14:48:31] 2026-03-12 18:47:55,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 14:48:31] 2026-03-12 18:47:55,361 | INFO     | did not find any defunct processes belonging to 1307974
[2026-03-12 14:48:31] 2026-03-12 18:47:55,629 | INFO     | did not find any defunct processes belonging to 1307974
[2026-03-12 14:48:31] 2026-03-12 18:47:55,630 | INFO     | ready for new job
[2026-03-12 14:48:31] 2026-03-12 18:47:55,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 14:48:31] 2026-03-12 18:47:55,631 | INFO     | **************************************
[2026-03-12 14:48:31] 2026-03-12 18:47:55,631 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 14:48:31] 2026-03-12 18:47:55,631 | INFO     | **************************************
[2026-03-12 14:48:31] 2026-03-12 18:47:55,631 | INFO     | 
[2026-03-12 14:48:31] 2026-03-12 18:47:55,640 | INFO     | architecture information:
[2026-03-12 14:48:31] 2026-03-12 18:47:55,641 | INFO     | executing command: cat /etc/os-release
[2026-03-12 14:48:31] 2026-03-12 18:47:55,692 | INFO     | cat /etc/os-release:
[2026-03-12 14:48:31] NAME="CentOS Linux"
[2026-03-12 14:48:31] VERSION="7 (Core)"
[2026-03-12 14:48:31] ID="centos"
[2026-03-12 14:48:31] ID_LIKE="rhel fedora"
[2026-03-12 14:48:31] VERSION_ID="7"
[2026-03-12 14:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 14:48:31] ANSI_COLOR="0;31"
[2026-03-12 14:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 14:48:31] HOME_URL="https://www.centos.org/"
[2026-03-12 14:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 14:48:31] 
[2026-03-12 14:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 14:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 14:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 14:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 14:48:31] 
[2026-03-12 14:48:31] 2026-03-12 18:47:55,692 | INFO     | **************************************
[2026-03-12 14:48:31] 2026-03-12 18:47:56,196 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-03-12 14:48:31] 2026-03-12 18:47:56,265 | INFO     | sufficient remaining disk space (168156987392 B)
[2026-03-12 14:48:31] 2026-03-12 18:47:56,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 14:48:31] 2026-03-12 18:47:56,266 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 14:48:31] 2026-03-12 18:47:56,266 | INFO     | update_server=False
[2026-03-12 14:48:31] 2026-03-12 18:47:56,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 14:48:31] 2026-03-12 18:47:56,352 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 14:48:31] 2026-03-12 18:47:56,352 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 14:48:31] 2026-03-12 18:47:56,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 14:48:31] 2026-03-12 18:47:56,352 | INFO     | will abort loop
[2026-03-12 14:48:31] 2026-03-12 18:47:56,613 | INFO     | all payload control threads have been joined
[2026-03-12 14:48:31] 2026-03-12 18:47:56,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 14:48:31] 2026-03-12 18:47:56,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 14:48:31] 2026-03-12 18:47:57,039 | INFO     | all job control threads have been joined
[2026-03-12 14:48:31] 2026-03-12 18:47:57,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 14:48:31] 2026-03-12 18:47:57,087 | INFO     | all data control threads have been joined
[2026-03-12 14:48:31] 2026-03-12 18:47:57,272 | INFO     | [job] retrieve thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:57,358 | INFO     | [job] job monitor thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:57,627 | INFO     | [payload] control thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:57,842 | INFO     | [payload] validate_post thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:57,850 | INFO     | [payload] failed_post thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:57,907 | INFO     | [job] validate thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,017 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,033 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,045 | INFO     | [job] control thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,091 | INFO     | [monitor] cgroup control has ended
[2026-03-12 14:48:31] 2026-03-12 18:47:58,098 | INFO     | [job] queue monitor thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,104 | INFO     | [data] control thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,403 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,408 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,410 | INFO     | [data] copytool_in thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:47:58,746 | INFO     | [data] copytool_out thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:48:00,889 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 14:48:31] 2026-03-12 18:48:01,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889612130112)>', '<ExcThread(monitor, started 139889114846976)>']
[2026-03-12 14:48:31] 2026-03-12 18:48:06,295 | INFO     | all workflow threads have been joined
[2026-03-12 14:48:31] 2026-03-12 18:48:06,295 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 14:48:31] 2026-03-12 18:48:06,295 | INFO     | traces error code: 0
[2026-03-12 14:48:31] 2026-03-12 18:48:06,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 14:48:31] 2026-03-12 18:48:28,947 | INFO     | PID=1259483 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 14:48:31] 2026-03-12 18:48:28,947 | INFO     | .. there are 107 such processes running
[2026-03-12 14:48:31] 2026-03-12 18:48:28,948 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 14:48:31] 2026-03-12 18:48:28,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 14:48:31] 2026-03-12 18:48:28,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 14:48:31] 2026-03-12 18:48:28,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 14:48:31] 2026-03-12 18:48:28,948 | INFO     | [monitor] control thread has ended
[2026-03-12 14:48:31] 2026-03-12 18:48:29,545 [wrapper] ==== pilot stdout END ====
[2026-03-12 14:48:31] 2026-03-12 18:48:29,561 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 14:48:31] 2026-03-12 18:48:29,591 [wrapper] pilotpid: 1259483
[2026-03-12 14:48:31] 2026-03-12 18:48:29,617 [wrapper] Pilot exit status: 0
[2026-03-12 14:48:31] 2026-03-12 18:48:29,765 [wrapper] pandaids: 7043152381
[2026-03-12 14:48:31] 2026-03-12 18:48:30,239 [wrapper] cleanup supervisor_pilot 2142425 1259485
[2026-03-12 14:48:31] 2026-03-12 18:48:30,295 [wrapper] Test setup, not cleaning
[2026-03-12 14:48:31] 2026-03-12 18:48:30,326 [wrapper] apfmon messages muted
[2026-03-12 14:48:31] 2026-03-12 18:48:30,362 [wrapper] ==== wrapper stdout END ====
[2026-03-12 14:48:31] 2026-03-12 18:48:30,415 [wrapper] ==== wrapper stderr END ====
[2026-03-12 14:48:31]  *** Error codes and diagnostics ***
[2026-03-12 14:48:31]     "exeErrorCode": 0,
[2026-03-12 14:48:31]     "exeErrorDiag": "",
[2026-03-12 14:48:31]     "pilotErrorCode": 0,
[2026-03-12 14:48:31]     "pilotErrorDiag": "",
[2026-03-12 14:48:31]  *** Listing of results directory ***
[2026-03-12 14:48:31] total 614784
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 01:40 pilot3.tar.gz
[2026-03-12 14:48:31] -rwx------. 1 boincer umatlas     36322 Mar 12 01:41 runpilot2-wrapper.sh
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 01:42 queuedata.json
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas       100 Mar 12 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 14:48:31] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 12:36 run_atlas
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas       105 Mar 12 12:36 job.xml
[2026-03-12 14:48:31] -rw-r--r--. 2 boincer umatlas 439243376 Mar 12 12:36 EVNT.46701403._000883.pool.root.1
[2026-03-12 14:48:31] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 12:36 start_atlas.sh
[2026-03-12 14:48:31] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 12:36 shared
[2026-03-12 14:48:31] -rw-r--r--. 2 boincer umatlas    597531 Mar 12 12:36 input.tar.gz
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas         0 Mar 12 12:36 boinc_lockfile
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas      2565 Mar 12 12:36 pandaJob.out
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas        57 Mar 12 12:36 setup.sh.local
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas   1006536 Mar 12 12:37 agis_schedconf.cvmfs.json
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas   1511578 Mar 12 12:37 agis_ddmendpoints.agis.ALL.json
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas       430 Mar 12 12:38 workernode_map.json
[2026-03-12 14:48:31] drwx------. 5 boincer umatlas      4096 Mar 12 12:38 pilot3
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas 183712330 Mar 12 14:46 HITS.48955006._044575.pool.root.1
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas       530 Mar 12 14:46 boinc_task_state.xml
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas      1033 Mar 12 14:47 memory_monitor_summary.json
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas    385211 Mar 12 14:47 log.48955006._044575.job.log.tgz.1
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas      6338 Mar 12 14:47 heartbeat.json
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas        95 Mar 12 14:47 pilot_heartbeat.json
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas      7183 Mar 12 14:48 init_data.xml
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas       824 Mar 12 14:48 pilotlog.txt
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas    933595 Mar 12 14:48 log.48955006._044575.job.log.1
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas       357 Mar 12 14:48 output.list
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas       620 Mar 12 14:48 runtime_log
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas   1341440 Mar 12 14:48 result.tar.gz
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas       651 Mar 12 14:48 w6YKDmtynK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAEmLDmiB1UKo.diag
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas      9336 Mar 12 14:48 runtime_log.err
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 14:48 boinc_mmap_file
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas        27 Mar 12 14:48 wrapper_checkpoint.txt
[2026-03-12 14:48:31] -rw-r--r--. 1 boincer umatlas     21145 Mar 12 14:48 stderr.txt
[2026-03-12 14:48:31] HITS file was successfully produced:
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas 183712330 Mar 12 14:46 shared/HITS.pool.root.1
[2026-03-12 14:48:31]  *** Contents of shared directory: ***
[2026-03-12 14:48:31] total 610280
[2026-03-12 14:48:31] -rw-r--r--. 2 boincer umatlas 439243376 Mar 12 12:36 ATLAS.root_0
[2026-03-12 14:48:31] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 12:36 start_atlas.sh
[2026-03-12 14:48:31] -rw-r--r--. 2 boincer umatlas    597531 Mar 12 12:36 input.tar.gz
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas 183712330 Mar 12 14:46 HITS.pool.root.1
[2026-03-12 14:48:31] -rw-------. 1 boincer umatlas   1341440 Mar 12 14:48 result.tar.gz
14:48:33 (1228178): run_atlas exited; CPU time 20791.657276
14:48:33 (1228178): called boinc_finish(0)

</stderr_txt>
]]>

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