Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:03:52 (4041908): wrapper (7.7.26015): starting
12:03:52 (4041908): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 12:03:52] Arguments: --nthreads 8
[2026-03-12 12:03:52] Threads: 8
[2026-03-12 12:03:52] Checking for CVMFS
[2026-03-12 12:03:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 12:03:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 12:03:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 12:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 12:03:55] 2.13.3.0 10223 182883 264136 157205 0 929 39641878 40960001 70618 16776704 0 2008435489 99.727 1434325705 47962 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 12:03:55] CVMFS is ok
[2026-03-12 12:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 12:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 12:03:55] Further information can be found at the LHC@home message board.
[2026-03-12 12:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 12:03:55] Checking for apptainer binary...
[2026-03-12 12:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 12:03:55] Running /usr/bin/apptainer --version
[2026-03-12 12:03:55] apptainer version 1.4.5-2.el9
[2026-03-12 12:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 12:03:55] c8-7-6.aglt2.org
[2026-03-12 12:03:55] apptainer works
[2026-03-12 12:03:55] Set ATHENA_PROC_NUMBER=8
[2026-03-12 12:03:55] Set ATHENA_CORE_NUMBER=8
[2026-03-12 12:04:15] Starting ATLAS job with PandaID=7038874322
[2026-03-12 12:04:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 14:30:56]  *** The last 200 lines of the pilot log: ***
[2026-03-12 14:30:56] 2026-03-12 18:30:18,223 | INFO     | sufficient remaining disk space (169249603584 B)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,224 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,224 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7038874322: 3540867 B (within 5033164800 B limit)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,224 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7038874322/HITS.48700890._003235.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,224 | INFO     | total size of present files: 0 B (workdir size: 3540867 B)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,224 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7038874322/HITS.48700890._003235.pool.root.1 since it does not exist
[2026-03-12 14:30:56] 2026-03-12 18:30:18,327 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038874322/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,328 | INFO     | extracted standard info from prmon json
[2026-03-12 14:30:56] 2026-03-12 18:30:18,328 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 14:30:56] 2026-03-12 18:30:18,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 14:30:56] 2026-03-12 18:30:18,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 14:30:56] 2026-03-12 18:30:18,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 14:30:56] 2026-03-12 18:30:18,347 | INFO     | fitting pss+swap vs Time
[2026-03-12 14:30:56] 2026-03-12 18:30:18,347 | INFO     | sum of square deviations: 850873762.6499988
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | sum of deviations: 35129511902.85
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | mean x: 1773335916.55
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | mean y: 2384822.2357142856
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | intersect: -73212265720.25592
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | chi2: 3.56923742080299
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | sum of square deviations: 762896014.9333338
[2026-03-12 14:30:56] 2026-03-12 18:30:18,348 | INFO     | sum of deviations: 42810595964.00002
[2026-03-12 14:30:56] 2026-03-12 18:30:18,349 | INFO     | mean x: 1773335764.0222223
[2026-03-12 14:30:56] 2026-03-12 18:30:18,349 | INFO     | mean y: 2397679.3333333335
[2026-03-12 14:30:56] 2026-03-12 18:30:18,349 | INFO     | intersect: -99509933511.30838
[2026-03-12 14:30:56] 2026-03-12 18:30:18,365 | INFO     | chi2: 2.797470193222611
[2026-03-12 14:30:56] 2026-03-12 18:30:18,365 | INFO     | current chi2=2.797470193222611 (change=21.622748407886817 %)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,365 | INFO     | right removable region: 134
[2026-03-12 14:30:56] 2026-03-12 18:30:18,365 | INFO     | sum of square deviations: 762925792.6370363
[2026-03-12 14:30:56] 2026-03-12 18:30:18,365 | INFO     | sum of deviations: 1312888131.3407345
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | mean x: 1773336069.0518517
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | mean y: 2443016.237037037
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | intersect: -3049219282.2537045
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | chi2: 0.9058861241910726
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | current chi2=0.9058861241910726 (change=74.61961709492357 %)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | sum of square deviations: 681257010.1230773
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | sum of deviations: -4501711362.261539
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | mean x: 1773336221.5538461
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | mean y: 2453797.323076923
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | intersect: 11720568545.5833
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | chi2: 0.8374422154874204
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | current chi2=0.8374422154874204 (change=7.555464961423321 %)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | left removable region: 20
[2026-03-12 14:30:56] 2026-03-12 18:30:18,366 | INFO     | sum of square deviations: 459379870.421052
[2026-03-12 14:30:56] 2026-03-12 18:30:18,367 | INFO     | sum of deviations: 1529223669.4210527
[2026-03-12 14:30:56] 2026-03-12 18:30:18,367 | INFO     | mean x: 1773336343.5263157
[2026-03-12 14:30:56] 2026-03-12 18:30:18,367 | INFO     | mean y: 2475853.0263157897
[2026-03-12 14:30:56] 2026-03-12 18:30:18,367 | INFO     | intersect: -5900760411.722193
[2026-03-12 14:30:56] 2026-03-12 18:30:18,389 | INFO     | chi2: 0.0006933108506320944
[2026-03-12 14:30:56] 2026-03-12 18:30:18,389 | INFO     | current memory leak: 3.33 B/s (using 114 data points, chi2=0.00)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | ..............................
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . Timing measurements:
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . get job = 0 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . initial setup = 46 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . payload setup = 53 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . stage-in = 0 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . payload execution = 8564 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . stage-out = 2 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | . log creation = 0 s
[2026-03-12 14:30:56] 2026-03-12 18:30:18,390 | INFO     | ..............................
[2026-03-12 14:30:56] 2026-03-12 18:30:19,281 | INFO     | 
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | job summary report
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | --------------------------------------------------
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | PanDA job id: 7038874322
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | task id: 48700890
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | errors: (none)
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | pilot state: finished 
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | transexitcode: 0
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | exeerrorcode: 0
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | exeerrordiag: 
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | exitcode: 0
[2026-03-12 14:30:56] 2026-03-12 18:30:19,282 | INFO     | exitmsg: OK
[2026-03-12 14:30:56] 2026-03-12 18:30:19,283 | INFO     | cpuconsumptiontime: 17325 s
[2026-03-12 14:30:56] 2026-03-12 18:30:19,283 | INFO     | nevents: 400
[2026-03-12 14:30:56] 2026-03-12 18:30:19,283 | INFO     | neventsw: 0
[2026-03-12 14:30:56] 2026-03-12 18:30:19,283 | INFO     | pid: 4069475
[2026-03-12 14:30:56] 2026-03-12 18:30:19,283 | INFO     | pgrp: 4069475
[2026-03-12 14:30:56] 2026-03-12 18:30:19,283 | INFO     | corecount: 8
[2026-03-12 14:30:56] 2026-03-12 18:30:19,285 | INFO     | event service: False
[2026-03-12 14:30:56] 2026-03-12 18:30:19,285 | INFO     | sizes: {0: 2254291, 1: 2280145, 8622: 2307959, 8623: 2307958, 8627: 2317012, 8629: 2317068, 8632: 2317418}
[2026-03-12 14:30:56] 2026-03-12 18:30:19,285 | INFO     | --------------------------------------------------
[2026-03-12 14:30:56] 2026-03-12 18:30:19,285 | INFO     | 
[2026-03-12 14:30:56] 2026-03-12 18:30:19,287 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 14:30:56] 2026-03-12 18:30:19,460 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | job 7038874322 has completed (purged errors)
[2026-03-12 14:30:56] 2026-03-12 18:30:19,462 | INFO     | overall cleanup function is called
[2026-03-12 14:30:56] 2026-03-12 18:30:19,670 | INFO     | PID=4058389 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 14:30:56] 2026-03-12 18:30:19,670 | INFO     | .. there are 97 such processes running
[2026-03-12 14:30:56] 2026-03-12 18:30:20,510 | INFO     | --- collectZombieJob: --- 10, [4069475]
[2026-03-12 14:30:56] 2026-03-12 18:30:20,510 | INFO     | zombie collector waiting for pid 4069475
[2026-03-12 14:30:56] 2026-03-12 18:30:20,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 14:30:56] 2026-03-12 18:30:20,510 | INFO     | collected zombie processes
[2026-03-12 14:30:56] 2026-03-12 18:30:20,510 | INFO     | will attempt to kill all subprocesses of pid=4069475
[2026-03-12 14:30:56] 2026-03-12 18:30:21,605 | INFO     | number of running child processes to parent process 4069475: 1
[2026-03-12 14:30:56] 2026-03-12 18:30:21,609 | INFO     | maximum number of monitored processes: 6
[2026-03-12 14:30:56] 2026-03-12 18:30:21,609 | INFO     | aborting job monitoring since job object (job id=7038874322) has expired
[2026-03-12 14:30:56] 2026-03-12 18:30:23,079 | INFO     | process IDs to be killed: [4069475] (in reverse order)
[2026-03-12 14:30:56] 2026-03-12 18:30:25,113 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 14:30:56] 2026-03-12 18:30:25,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 14:30:56] 2026-03-12 18:30:25,172 | INFO     | did not find any defunct processes belonging to 4069475
[2026-03-12 14:30:56] 2026-03-12 18:30:25,232 | INFO     | did not find any defunct processes belonging to 4069475
[2026-03-12 14:30:56] 2026-03-12 18:30:25,232 | INFO     | ready for new job
[2026-03-12 14:30:56] 2026-03-12 18:30:25,233 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 14:30:56] 2026-03-12 18:30:25,234 | INFO     | **************************************
[2026-03-12 14:30:56] 2026-03-12 18:30:25,234 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 14:30:56] 2026-03-12 18:30:25,234 | INFO     | **************************************
[2026-03-12 14:30:56] 2026-03-12 18:30:25,234 | INFO     | 
[2026-03-12 14:30:56] 2026-03-12 18:30:25,238 | INFO     | architecture information:
[2026-03-12 14:30:56] 2026-03-12 18:30:25,239 | INFO     | executing command: cat /etc/os-release
[2026-03-12 14:30:56] 2026-03-12 18:30:25,283 | INFO     | cat /etc/os-release:
[2026-03-12 14:30:56] NAME="CentOS Linux"
[2026-03-12 14:30:56] VERSION="7 (Core)"
[2026-03-12 14:30:56] ID="centos"
[2026-03-12 14:30:56] ID_LIKE="rhel fedora"
[2026-03-12 14:30:56] VERSION_ID="7"
[2026-03-12 14:30:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 14:30:56] ANSI_COLOR="0;31"
[2026-03-12 14:30:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 14:30:56] HOME_URL="https://www.centos.org/"
[2026-03-12 14:30:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 14:30:56] 
[2026-03-12 14:30:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 14:30:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 14:30:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 14:30:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 14:30:56] 
[2026-03-12 14:30:56] 2026-03-12 18:30:25,283 | INFO     | **************************************
[2026-03-12 14:30:56] 2026-03-12 18:30:25,786 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 14:30:56] 2026-03-12 18:30:25,913 | INFO     | sufficient remaining disk space (169253797888 B)
[2026-03-12 14:30:56] 2026-03-12 18:30:25,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 14:30:56] 2026-03-12 18:30:25,913 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 14:30:56] 2026-03-12 18:30:25,914 | INFO     | update_server=False
[2026-03-12 14:30:56] 2026-03-12 18:30:25,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 14:30:56] 2026-03-12 18:30:25,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 14:30:56] 2026-03-12 18:30:25,914 | INFO     | aborting loop
[2026-03-12 14:30:56] 2026-03-12 18:30:25,947 | INFO     | all payload control threads have been joined
[2026-03-12 14:30:56] 2026-03-12 18:30:26,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 14:30:56] 2026-03-12 18:30:26,599 | INFO     | all data control threads have been joined
[2026-03-12 14:30:56] 2026-03-12 18:30:26,920 | INFO     | [job] job monitor thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:26,929 | INFO     | [job] retrieve thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:26,953 | INFO     | [payload] control thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,128 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,138 | INFO     | [payload] validate_post thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,139 | INFO     | all job control threads have been joined
[2026-03-12 14:30:56] 2026-03-12 18:30:27,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 14:30:56] 2026-03-12 18:30:27,396 | INFO     | [job] validate thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,404 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,405 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,604 | INFO     | [data] control thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,641 | INFO     | [data] copytool_in thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,655 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,761 | INFO     | [payload] failed_post thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:27,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 14:30:56] 2026-03-12 18:30:28,145 | INFO     | [job] control thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:28,882 | INFO     | [job] queue monitor thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:29,215 | INFO     | [data] copytool_out thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:30,308 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 14:30:56] 2026-03-12 18:30:39,986 | INFO     | [monitor] cgroup control has ended
[2026-03-12 14:30:56] 2026-03-12 18:30:41,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243504138048)>', '<ExcThread(monitor, started 140242342369024)>']
[2026-03-12 14:30:56] 2026-03-12 18:30:46,634 | INFO     | all workflow threads have been joined
[2026-03-12 14:30:56] 2026-03-12 18:30:46,634 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 14:30:56] 2026-03-12 18:30:46,634 | INFO     | traces error code: 0
[2026-03-12 14:30:56] 2026-03-12 18:30:46,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 14:30:56] 2026-03-12 18:30:54,508 | INFO     | PID=4058389 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 14:30:56] 2026-03-12 18:30:54,519 | INFO     | .. there are 96 such processes running
[2026-03-12 14:30:56] 2026-03-12 18:30:54,545 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 14:30:56] 2026-03-12 18:30:54,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 14:30:56] 2026-03-12 18:30:54,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 14:30:56] 2026-03-12 18:30:54,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 14:30:56] 2026-03-12 18:30:54,552 | INFO     | [monitor] control thread has ended
[2026-03-12 14:30:56] 2026-03-12 18:30:54,938 [wrapper] ==== pilot stdout END ====
[2026-03-12 14:30:56] 2026-03-12 18:30:54,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 14:30:56] 2026-03-12 18:30:55,037 [wrapper] pilotpid: 4058389
[2026-03-12 14:30:56] 2026-03-12 18:30:55,061 [wrapper] Pilot exit status: 0
[2026-03-12 14:30:56] 2026-03-12 18:30:55,215 [wrapper] pandaids: 7038874322
[2026-03-12 14:30:56] 2026-03-12 18:30:55,946 [wrapper] cleanup supervisor_pilot  839575 4058390
[2026-03-12 14:30:56] 2026-03-12 18:30:55,965 [wrapper] Test setup, not cleaning
[2026-03-12 14:30:56] 2026-03-12 18:30:55,977 [wrapper] apfmon messages muted
[2026-03-12 14:30:56] 2026-03-12 18:30:56,008 [wrapper] ==== wrapper stdout END ====
[2026-03-12 14:30:56] 2026-03-12 18:30:56,052 [wrapper] ==== wrapper stderr END ====
[2026-03-12 14:30:56]  *** Error codes and diagnostics ***
[2026-03-12 14:30:56]     "exeErrorCode": 0,
[2026-03-12 14:30:56]     "exeErrorDiag": "",
[2026-03-12 14:30:56]     "pilotErrorCode": 0,
[2026-03-12 14:30:56]     "pilotErrorDiag": "",
[2026-03-12 14:30:56]  *** Listing of results directory ***
[2026-03-12 14:30:56] total 334620
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 05:35 pilot3.tar.gz
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 05:36 queuedata.json
[2026-03-12 14:30:56] -rwx------. 1 boincer umatlas     36322 Mar  4 05:37 runpilot2-wrapper.sh
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas       100 Mar 12 12:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 14:30:56] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 12:03 run_atlas
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas       105 Mar 12 12:03 job.xml
[2026-03-12 14:30:56] -rw-r--r--. 2 boincer umatlas 188888994 Mar 12 12:03 EVNT.48700888._000131.pool.root.1
[2026-03-12 14:30:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 12:03 start_atlas.sh
[2026-03-12 14:30:56] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 12:03 shared
[2026-03-12 14:30:56] -rw-r--r--. 2 boincer umatlas    597931 Mar 12 12:03 input.tar.gz
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas         0 Mar 12 12:03 boinc_lockfile
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas      2512 Mar 12 12:03 pandaJob.out
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas        57 Mar 12 12:04 setup.sh.local
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas   1006536 Mar 12 12:05 agis_schedconf.cvmfs.json
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas   1511578 Mar 12 12:05 agis_ddmendpoints.agis.ALL.json
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas       429 Mar 12 12:06 workernode_map.json
[2026-03-12 14:30:56] drwx------. 5 boincer umatlas      4096 Mar 12 12:06 pilot3
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas 146953949 Mar 12 14:28 HITS.48700890._003235.pool.root.1
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas       529 Mar 12 14:29 boinc_task_state.xml
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas      7172 Mar 12 14:29 init_data.xml
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas      1045 Mar 12 14:30 memory_monitor_summary.json
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas    368120 Mar 12 14:30 log.48700890._003235.job.log.tgz.1
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas      6347 Mar 12 14:30 heartbeat.json
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas        95 Mar 12 14:30 pilot_heartbeat.json
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas       823 Mar 12 14:30 pilotlog.txt
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 14:30 boinc_mmap_file
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas        27 Mar 12 14:30 wrapper_checkpoint.txt
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas   1070120 Mar 12 14:30 log.48700890._003235.job.log.1
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas       357 Mar 12 14:30 output.list
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas       620 Mar 12 14:30 runtime_log
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas   1454080 Mar 12 14:30 result.tar.gz
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas      9331 Mar 12 14:30 runtime_log.err
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas       655 Mar 12 14:30 2CWNDmQmyH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm78JLDmunIFLm.diag
[2026-03-12 14:30:56] -rw-r--r--. 1 boincer umatlas     21651 Mar 12 14:30 stderr.txt
[2026-03-12 14:30:56] HITS file was successfully produced:
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas 146953949 Mar 12 14:28 shared/HITS.pool.root.1
[2026-03-12 14:30:56]  *** Contents of shared directory: ***
[2026-03-12 14:30:56] total 330000
[2026-03-12 14:30:56] -rw-r--r--. 2 boincer umatlas 188888994 Mar 12 12:03 ATLAS.root_0
[2026-03-12 14:30:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 12:03 start_atlas.sh
[2026-03-12 14:30:56] -rw-r--r--. 2 boincer umatlas    597931 Mar 12 12:03 input.tar.gz
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas 146953949 Mar 12 14:28 HITS.pool.root.1
[2026-03-12 14:30:56] -rw-------. 1 boincer umatlas   1454080 Mar 12 14:30 result.tar.gz
14:30:58 (4041908): run_atlas exited; CPU time 17702.905551
14:30:58 (4041908): called boinc_finish(0)

</stderr_txt>
]]>

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