Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:14 (3846036): wrapper (7.7.26015): starting
10:08:14 (3846036): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 10:08:14] Arguments: --nthreads 4
[2026-03-13 10:08:14] Threads: 4
[2026-03-13 10:08:14] Checking for CVMFS
[2026-03-13 10:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 10:08:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 10:08:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 10:08:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 10:08:15] 2.9.2.0 3074 21102 106428 157233 1 50 29571536 36864001 0 130560 0 9644368 99.985 792227 14195 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 10:08:15] CVMFS is ok
[2026-03-13 10:08:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 10:08:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 10:08:15] Further information can be found at the LHC@home message board.
[2026-03-13 10:08:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 10:08:15] Checking for apptainer binary...
[2026-03-13 10:08:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 10:08:15] Running /usr/bin/apptainer --version
[2026-03-13 10:08:15] apptainer version 1.4.1-1.1
[2026-03-13 10:08:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 10:08:15] thA314
[2026-03-13 10:08:15] apptainer works
[2026-03-13 10:08:15] Set ATHENA_PROC_NUMBER=4
[2026-03-13 10:08:15] Set ATHENA_CORE_NUMBER=4
[2026-03-13 10:08:15] Starting ATLAS job with PandaID=7051652694
[2026-03-13 10:08:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 12:44:44]  *** The last 200 lines of the pilot log: ***
[2026-03-13 12:44:44] VERSION_ID="7"
[2026-03-13 12:44:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 12:44:44] ANSI_COLOR="0;31"
[2026-03-13 12:44:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 12:44:44] HOME_URL="https://www.centos.org/"
[2026-03-13 12:44:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 12:44:44] 
[2026-03-13 12:44:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 12:44:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 12:44:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 12:44:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 12:44:44] 
[2026-03-13 12:44:44] 2026-03-13 11:43:39,417 | INFO     | **************************************
[2026-03-13 12:44:44] 2026-03-13 11:43:39,920 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 12:44:44] 2026-03-13 11:43:39,936 | INFO     | sufficient remaining disk space (226507096064 B)
[2026-03-13 12:44:44] 2026-03-13 11:43:39,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 12:44:44] 2026-03-13 11:43:39,936 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 12:44:44] 2026-03-13 11:43:39,937 | INFO     | update_server=False
[2026-03-13 12:44:44] 2026-03-13 11:43:39,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 12:44:44] 2026-03-13 11:43:39,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 12:44:44] 2026-03-13 11:43:39,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 12:44:44] 2026-03-13 11:43:40,287 | INFO     | all data control threads have been joined
[2026-03-13 12:44:44] 2026-03-13 11:43:40,290 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 12:44:44] 2026-03-13 11:43:40,290 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 12:44:44] 2026-03-13 11:43:40,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 12:44:44] 2026-03-13 11:43:40,291 | INFO     | will abort loop
[2026-03-13 12:44:44] 2026-03-13 11:43:40,568 | INFO     | job.realtimelogging is not enabled
[2026-03-13 12:44:44] 2026-03-13 11:43:40,907 | INFO     | all payload control threads have been joined
[2026-03-13 12:44:44] 2026-03-13 11:43:40,942 | INFO     | [job] retrieve thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:40,943 | INFO     | [job] queue monitor thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,293 | INFO     | [data] control thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,296 | INFO     | [job] job monitor thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,412 | INFO     | all job control threads have been joined
[2026-03-13 12:44:44] 2026-03-13 11:43:41,574 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,635 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,913 | INFO     | [payload] control thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,943 | INFO     | [data] copytool_out thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,950 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:41,978 | INFO     | [payload] validate_post thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:42,080 | INFO     | [job] validate thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:42,142 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:42,255 | INFO     | [payload] failed_post thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:42,415 | INFO     | [data] copytool_in thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:42,418 | INFO     | [job] control thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:43:43,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 12:44:44] 2026-03-13 11:43:47,275 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 12:44:44] 2026-03-13 11:44:10,064 | INFO     | PID=3850154 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 12:44:44] 2026-03-13 11:44:10,064 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 12:44:44] 2026-03-13 11:44:10,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 12:44:44] 2026-03-13 11:44:10,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 12:44:44] 2026-03-13 11:44:37,953 | INFO     | [monitor] cgroup control has ended
[2026-03-13 12:44:44] 2026-03-13 11:44:39,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442524997440)>', '<ExcThread(monitor, started 140441697625856)>']
[2026-03-13 12:44:44] 2026-03-13 11:44:40,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 12:44:44] 2026-03-13 11:44:40,219 | INFO     | [monitor] control thread has ended
[2026-03-13 12:44:44] 2026-03-13 11:44:44,746 | INFO     | all workflow threads have been joined
[2026-03-13 12:44:44] 2026-03-13 11:44:44,746 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 12:44:44] 2026-03-13 11:44:44,746 | INFO     | traces error code: 0
[2026-03-13 12:44:44] 2026-03-13 11:44:44,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 12:44:44] 2026-03-13 11:44:44,826 [wrapper] ==== pilot stdout END ====
[2026-03-13 12:44:44] 2026-03-13 11:44:44,830 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 12:44:44] 2026-03-13 11:44:44,833 [wrapper] pilotpid: 3850154
[2026-03-13 12:44:44] 2026-03-13 11:44:44,837 [wrapper] Pilot exit status: 0
[2026-03-13 12:44:44] 2026-03-13 11:44:44,848 [wrapper] pandaids: 7051652694
[2026-03-13 12:44:44] 2026-03-13 11:44:44,870 [wrapper] cleanup supervisor_pilot 3863627 3850155
[2026-03-13 12:44:44] 2026-03-13 11:44:44,874 [wrapper] Test setup, not cleaning
[2026-03-13 12:44:44] 2026-03-13 11:44:44,878 [wrapper] apfmon messages muted
[2026-03-13 12:44:44] 2026-03-13 11:44:44,882 [wrapper] ==== wrapper stdout END ====
[2026-03-13 12:44:44] 2026-03-13 11:44:44,885 [wrapper] ==== wrapper stderr END ====
[2026-03-13 12:44:44]  *** Error codes and diagnostics ***
[2026-03-13 12:44:44]     "exeErrorCode": 0,
[2026-03-13 12:44:44]     "exeErrorDiag": "",
[2026-03-13 12:44:44]     "pilotErrorCode": 0,
[2026-03-13 12:44:44]     "pilotErrorDiag": "",
[2026-03-13 12:44:44]  *** Listing of results directory ***
[2026-03-13 12:44:44] total 501836
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc      5111 Mar 12 11:21 queuedata.json
[2026-03-13 12:44:44] -rwx------ 1 boinc boinc     36322 Mar 12 11:21 runpilot2-wrapper.sh
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc    585013 Mar 12 11:21 pilot3.tar.gz
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc       100 Mar 13 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 12:44:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 10:08 run_atlas
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc       105 Mar 13 10:08 job.xml
[2026-03-13 12:44:44] -rw-r--r-- 2 boinc boinc 234038161 Mar 13 10:08 EVNT.48967065._000074.pool.root.1
[2026-03-13 12:44:44] -rw-r--r-- 2 boinc boinc    597537 Mar 13 10:08 input.tar.gz
[2026-03-13 12:44:44] -rw-r--r-- 2 boinc boinc     15845 Mar 13 10:08 start_atlas.sh
[2026-03-13 12:44:44] drwxrwx--x 2 boinc boinc      4096 Mar 13 10:08 shared
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc         0 Mar 13 10:08 boinc_setup_complete
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc      6376 Mar 13 10:08 init_data.xml
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc         0 Mar 13 10:08 boinc_lockfile
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc      2613 Mar 13 10:08 pandaJob.out
[2026-03-13 12:44:44] -rw------- 1 boinc boinc   1006487 Mar 13 10:08 agis_schedconf.cvmfs.json
[2026-03-13 12:44:44] -rw------- 1 boinc boinc   1511578 Mar 13 10:08 agis_ddmendpoints.agis.ALL.json
[2026-03-13 12:44:44] -rw------- 1 boinc boinc       427 Mar 13 10:08 workernode_map.json
[2026-03-13 12:44:44] drwx------ 5 boinc boinc      4096 Mar 13 10:08 pilot3
[2026-03-13 12:44:44] -rw------- 1 boinc boinc 272615707 Mar 13 12:43 HITS.48967067._001883.pool.root.1
[2026-03-13 12:44:44] -rw------- 1 boinc boinc        95 Mar 13 12:43 pilot_heartbeat.json
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc       530 Mar 13 12:43 boinc_task_state.xml
[2026-03-13 12:44:44] -rw------- 1 boinc boinc      1018 Mar 13 12:43 memory_monitor_summary.json
[2026-03-13 12:44:44] -rw------- 1 boinc boinc    320042 Mar 13 12:43 log.48967067._001883.job.log.tgz.1
[2026-03-13 12:44:44] -rw------- 1 boinc boinc      6309 Mar 13 12:43 heartbeat.json
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc      8192 Mar 13 12:44 boinc_mmap_file
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc        27 Mar 13 12:44 wrapper_checkpoint.txt
[2026-03-13 12:44:44] -rw------- 1 boinc boinc      5006 Mar 13 12:44 pilotlog.txt
[2026-03-13 12:44:44] -rw------- 1 boinc boinc   1328682 Mar 13 12:44 log.48967067._001883.job.log.1
[2026-03-13 12:44:44] -rw------- 1 boinc boinc       357 Mar 13 12:44 output.list
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc       620 Mar 13 12:44 runtime_log
[2026-03-13 12:44:44] -rw------- 1 boinc boinc   1669120 Mar 13 12:44 result.tar.gz
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc      8896 Mar 13 12:44 runtime_log.err
[2026-03-13 12:44:44] -rw------- 1 boinc boinc       657 Mar 13 12:44 Re2NDmTLsK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1njLDmSbNIEn.diag
[2026-03-13 12:44:44] -rw-r--r-- 1 boinc boinc      8869 Mar 13 12:44 stderr.txt
[2026-03-13 12:44:44] HITS file was successfully produced:
[2026-03-13 12:44:44] -rw------- 1 boinc boinc 272615707 Mar 13 12:43 shared/HITS.pool.root.1
[2026-03-13 12:44:44]  *** Contents of shared directory: ***
[2026-03-13 12:44:44] total 497020
[2026-03-13 12:44:44] -rw-r--r-- 2 boinc boinc 234038161 Mar 13 10:08 ATLAS.root_0
[2026-03-13 12:44:44] -rw-r--r-- 2 boinc boinc    597537 Mar 13 10:08 input.tar.gz
[2026-03-13 12:44:44] -rw-r--r-- 2 boinc boinc     15845 Mar 13 10:08 start_atlas.sh
[2026-03-13 12:44:44] -rw------- 1 boinc boinc 272615707 Mar 13 12:43 HITS.pool.root.1
[2026-03-13 12:44:44] -rw------- 1 boinc boinc   1669120 Mar 13 12:44 result.tar.gz
12:44:46 (3846036): run_atlas exited; CPU time 35849.250834
12:44:46 (3846036): called boinc_finish(0)

</stderr_txt>
]]>

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