Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:25:14 (565996): wrapper (7.7.26015): starting
22:25:14 (565996): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 22:25:14] Arguments: --nthreads 12
[2026-03-12 22:25:14] Threads: 12
[2026-03-12 22:25:14] Checking for CVMFS
[2026-03-12 22:25:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 22:25:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 22:25:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 22:25:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 22:25:14] 2.12.7.0 4877 569 62268 157223 2 187 2139933 4194305 2707 130560 0 1283858 99.997 18006 2215 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-12 22:25:14] CVMFS is ok
[2026-03-12 22:25:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 22:25:14] Checking for apptainer binary...
[2026-03-12 22:25:14] apptainer is not installed, using version from CVMFS
[2026-03-12 22:25:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 22:25:14] Trebeth
[2026-03-12 22:25:14] apptainer works
[2026-03-12 22:25:14] Set ATHENA_PROC_NUMBER=12
[2026-03-12 22:25:14] Set ATHENA_CORE_NUMBER=12
[2026-03-12 22:25:14] Starting ATLAS job with PandaID=7038874290
[2026-03-12 22:25:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 23:15:37]  *** The last 200 lines of the pilot log: ***
[2026-03-12 23:15:37]  filetype=log
[2026-03-12 23:15:37]  guid=ed3253ea-f4eb-4179-a66b-a748f94c31bf
[2026-03-12 23:15:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 23:15:37]  is_altstaged=None
[2026-03-12 23:15:37]  is_tar=False
[2026-03-12 23:15:37]  lfn=log.48700890._003203.job.log.tgz.1
[2026-03-12 23:15:37]  mtime=0
[2026-03-12 23:15:37]  protocol_id=None
[2026-03-12 23:15:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 23:15:37]  replicas=None
[2026-03-12 23:15:37]  scope=mc23_13p6TeV
[2026-03-12 23:15:37]  status=None
[2026-03-12 23:15:37]  status_code=0
[2026-03-12 23:15:37]  storage_token=
[2026-03-12 23:15:37]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7038874290/log.48700890._003203.job.log.tgz.1
[2026-03-12 23:15:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/47/log.48700890._003203.job.log.tgz.1
[2026-03-12 23:15:37]  workdir=None
[2026-03-12 23:15:37] ]
[2026-03-12 23:15:37] 2026-03-13 03:14:47,281 | INFO     | transferring file log.48700890._003203.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7038874290/log.48700890._003203.job.log.tgz.1 to /var/lib/boinc
[2026-03-12 23:15:37] 2026-03-13 03:14:47,281 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7038874290/log.48700890._003203.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.487008
[2026-03-12 23:15:37] 2026-03-13 03:14:47,295 | INFO     | adding to output.list: log.48700890._003203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/47/log.48700890._003203.job.log.tg
[2026-03-12 23:15:37] 2026-03-13 03:14:47,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 23:15:37] 2026-03-13 03:14:47,296 | INFO     | summary of transferred files:
[2026-03-12 23:15:37] 2026-03-13 03:14:47,296 | INFO     |  -- lfn=log.48700890._003203.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 23:15:37] 2026-03-13 03:14:47,297 | INFO     | stage-out finished correctly
[2026-03-12 23:15:37] 2026-03-13 03:14:47,375 | INFO     | time since job start (2960s) is within the limit (349056.0s)
[2026-03-12 23:15:37] 2026-03-13 03:14:48,154 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 23:15:37] 2026-03-13 03:14:48,576 | INFO     | monitor loop #226: job 0:7038874290 is in state 'finished'
[2026-03-12 23:15:37] 2026-03-13 03:14:48,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,391 | INFO     | time since job start (2962s) is within the limit (349056.0s)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,679 | INFO     | job 7038874290 has state=finished
[2026-03-12 23:15:37] 2026-03-13 03:14:49,679 | INFO     | preparing for final server update for job 7038874290 in state='finished'
[2026-03-12 23:15:37] 2026-03-13 03:14:49,679 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7038874290/jobReport.json
[2026-03-12 23:15:37] 2026-03-13 03:14:49,682 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-12 23:15:37] 2026-03-13 03:14:49,682 | INFO     | this job has now completed (state=finished)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,682 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,682 | INFO     | log transfer has been attempted: DONE
[2026-03-12 23:15:37] 2026-03-13 03:14:49,682 | INFO     | job 7038874290 has finished - writing final server update
[2026-03-12 23:15:37] 2026-03-13 03:14:49,683 | INFO     | total number of processed events: 400 (read)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,711 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7038874290/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,712 | INFO     | extracted standard info from prmon json
[2026-03-12 23:15:37] 2026-03-13 03:14:49,712 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 23:15:37] 2026-03-13 03:14:49,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 23:15:37] 2026-03-13 03:14:49,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 23:15:37] 2026-03-13 03:14:49,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 23:15:37] 2026-03-13 03:14:49,714 | INFO     | fitting pss+swap vs Time
[2026-03-12 23:15:37] 2026-03-13 03:14:49,714 | INFO     | sum of square deviations: 22960430.5
[2026-03-12 23:15:37] 2026-03-13 03:14:49,714 | INFO     | sum of deviations: 2195403389.5
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | mean x: 1773370302.5
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | mean y: 2758043.785714286
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | intersect: -169561273995.9071
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | chi2: 0.15259410681400715
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | current memory leak: 95.62 B/s (using 42 data points, chi2=0.15)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | could have reported an average CPU frequency of 2105 MHz (5 samples)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,715 | INFO     | ..............................
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . Timing measurements:
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . get job = 0 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . initial setup = 5 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . payload setup = 4 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . stage-in = 0 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . payload execution = 2938 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . stage-out = 0 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | . log creation = 0 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,716 | INFO     | ..............................
[2026-03-12 23:15:37] 2026-03-13 03:14:49,801 | INFO     | 
[2026-03-12 23:15:37] 2026-03-13 03:14:49,801 | INFO     | job summary report
[2026-03-12 23:15:37] 2026-03-13 03:14:49,801 | INFO     | --------------------------------------------------
[2026-03-12 23:15:37] 2026-03-13 03:14:49,801 | INFO     | PanDA job id: 7038874290
[2026-03-12 23:15:37] 2026-03-13 03:14:49,801 | INFO     | task id: 48700890
[2026-03-12 23:15:37] 2026-03-13 03:14:49,801 | INFO     | errors: (none)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | pilot state: finished 
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | transexitcode: 0
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | exeerrorcode: 0
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | exeerrordiag: 
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | exitcode: 0
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | exitmsg: OK
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | cpuconsumptiontime: 28371 s
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | nevents: 400
[2026-03-12 23:15:37] 2026-03-13 03:14:49,802 | INFO     | neventsw: 0
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | pid: 574760
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | pgrp: 574760
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | corecount: 12
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | event service: False
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | sizes: {0: 2279689, 1: 2280150, 11: 2280150, 2947: 2305528, 2949: 2314540, 2950: 2314596, 2951: 2314950}
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | --------------------------------------------------
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | 
[2026-03-12 23:15:37] 2026-03-13 03:14:49,803 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,825 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,826 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 23:15:37] 2026-03-13 03:14:49,826 | INFO     | job 7038874290 has completed (purged errors)
[2026-03-12 23:15:37] 2026-03-13 03:14:49,826 | INFO     | overall cleanup function is called
[2026-03-12 23:15:37] 2026-03-13 03:14:50,834 | INFO     | --- collectZombieJob: --- 10, [574760]
[2026-03-12 23:15:37] 2026-03-13 03:14:50,834 | INFO     | zombie collector waiting for pid 574760
[2026-03-12 23:15:37] 2026-03-13 03:14:50,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 23:15:37] 2026-03-13 03:14:50,834 | INFO     | collected zombie processes
[2026-03-12 23:15:37] 2026-03-13 03:14:50,834 | INFO     | will attempt to kill all subprocesses of pid=574760
[2026-03-12 23:15:37] 2026-03-13 03:14:51,007 | INFO     | process IDs to be killed: [574760] (in reverse order)
[2026-03-12 23:15:37] 2026-03-13 03:14:51,050 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 23:15:37] 2026-03-13 03:14:51,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 23:15:37] 2026-03-13 03:14:51,056 | INFO     | did not find any defunct processes belonging to 574760
[2026-03-12 23:15:37] 2026-03-13 03:14:51,061 | INFO     | did not find any defunct processes belonging to 574760
[2026-03-12 23:15:37] 2026-03-13 03:14:51,062 | INFO     | ready for new job
[2026-03-12 23:15:37] 2026-03-13 03:14:51,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 23:15:37] 2026-03-13 03:14:51,065 | INFO     | **************************************
[2026-03-12 23:15:37] 2026-03-13 03:14:51,065 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 23:15:37] 2026-03-13 03:14:51,066 | INFO     | **************************************
[2026-03-12 23:15:37] 2026-03-13 03:14:51,066 | INFO     | 
[2026-03-12 23:15:37] 2026-03-13 03:14:51,086 | INFO     | architecture information:
[2026-03-12 23:15:37] 2026-03-13 03:14:51,086 | INFO     | executing command: cat /etc/os-release
[2026-03-12 23:15:37] 2026-03-13 03:14:51,098 | INFO     | cat /etc/os-release:
[2026-03-12 23:15:37] NAME="CentOS Linux"
[2026-03-12 23:15:37] VERSION="7 (Core)"
[2026-03-12 23:15:37] ID="centos"
[2026-03-12 23:15:37] ID_LIKE="rhel fedora"
[2026-03-12 23:15:37] VERSION_ID="7"
[2026-03-12 23:15:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 23:15:37] ANSI_COLOR="0;31"
[2026-03-12 23:15:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 23:15:37] HOME_URL="https://www.centos.org/"
[2026-03-12 23:15:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 23:15:37] 
[2026-03-12 23:15:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 23:15:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 23:15:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 23:15:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 23:15:37] 
[2026-03-12 23:15:37] 2026-03-13 03:14:51,099 | INFO     | **************************************
[2026-03-12 23:15:37] 2026-03-13 03:14:51,602 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-12 23:15:37] 2026-03-13 03:14:51,616 | INFO     | sufficient remaining disk space (398277476352 B)
[2026-03-12 23:15:37] 2026-03-13 03:14:51,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 23:15:37] 2026-03-13 03:14:51,617 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 23:15:37] 2026-03-13 03:14:51,617 | INFO     | update_server=False
[2026-03-12 23:15:37] 2026-03-13 03:14:51,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 23:15:37] 2026-03-13 03:14:51,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:15:37] 2026-03-13 03:14:51,957 | INFO     | all payload control threads have been joined
[2026-03-12 23:15:37] 2026-03-13 03:14:52,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:15:37] 2026-03-13 03:14:52,084 | INFO     | aborting loop
[2026-03-12 23:15:37] 2026-03-13 03:14:52,212 | INFO     | all job control threads have been joined
[2026-03-12 23:15:37] 2026-03-13 03:14:52,619 | INFO     | [job] queue monitor thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:52,622 | INFO     | [job] retrieve thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:52,711 | INFO     | all data control threads have been joined
[2026-03-12 23:15:37] 2026-03-13 03:14:52,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 23:15:37] 2026-03-13 03:14:52,962 | INFO     | [payload] control thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,041 | INFO     | [job] validate thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,074 | INFO     | [payload] validate_post thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,089 | INFO     | [job] job monitor thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,217 | INFO     | [job] control thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,372 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,409 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,517 | INFO     | [payload] failed_post thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,667 | INFO     | [data] copytool_in thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:53,714 | INFO     | [data] control thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:54,082 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:54,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 23:15:37] 2026-03-13 03:14:54,894 | INFO     | [data] copytool_out thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:14:58,255 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:15:02,038 | INFO     | job.realtimelogging is not enabled
[2026-03-12 23:15:37] 2026-03-13 03:15:03,042 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 23:15:37] 2026-03-13 03:15:22,751 | INFO     | PID=569982 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 23:15:37] 2026-03-13 03:15:22,751 | INFO     | .. there are 4 such processes running
[2026-03-12 23:15:37] 2026-03-13 03:15:22,752 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 23:15:37] 2026-03-13 03:15:22,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 23:15:37] 2026-03-13 03:15:22,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 23:15:37] 2026-03-13 03:15:31,994 | INFO     | [monitor] cgroup control has ended
[2026-03-12 23:15:37] 2026-03-13 03:15:32,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827446097728)>', '<ExcThread(monitor, started 139827014002432)>']
[2026-03-12 23:15:37] 2026-03-13 03:15:32,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 23:15:37] 2026-03-13 03:15:32,799 | INFO     | [monitor] control thread has ended
[2026-03-12 23:15:37] 2026-03-13 03:15:37,306 | INFO     | all workflow threads have been joined
[2026-03-12 23:15:37] 2026-03-13 03:15:37,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 23:15:37] 2026-03-13 03:15:37,307 | INFO     | traces error code: 0
[2026-03-12 23:15:37] 2026-03-13 03:15:37,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 23:15:37] 2026-03-13 03:15:37,414 [wrapper] ==== pilot stdout END ====
[2026-03-12 23:15:37] 2026-03-13 03:15:37,416 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 23:15:37] 2026-03-13 03:15:37,418 [wrapper] pilotpid: 569982
[2026-03-12 23:15:37] 2026-03-13 03:15:37,420 [wrapper] Pilot exit status: 0
[2026-03-12 23:15:37] 2026-03-13 03:15:37,427 [wrapper] pandaids: 7038874290
[2026-03-12 23:15:37] 2026-03-13 03:15:37,468 [wrapper] cleanup supervisor_pilot  602077 569983
[2026-03-12 23:15:37] 2026-03-13 03:15:37,470 [wrapper] Test setup, not cleaning
[2026-03-12 23:15:37] 2026-03-13 03:15:37,472 [wrapper] apfmon messages muted
[2026-03-12 23:15:37] 2026-03-13 03:15:37,474 [wrapper] ==== wrapper stdout END ====
[2026-03-12 23:15:37] 2026-03-13 03:15:37,476 [wrapper] ==== wrapper stderr END ====
[2026-03-12 23:15:37]  *** Error codes and diagnostics ***
[2026-03-12 23:15:37]     "exeErrorCode": 0,
[2026-03-12 23:15:37]     "exeErrorDiag": "",
[2026-03-12 23:15:37]     "pilotErrorCode": 0,
[2026-03-12 23:15:37]     "pilotErrorDiag": "",
[2026-03-12 23:15:37]  *** Listing of results directory ***
[2026-03-12 23:15:37] total 337172
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc    584627 Mar  4 05:35 pilot3.tar.gz
[2026-03-12 23:15:37] -rwx------ 1 boinc boinc     36322 Mar  4 05:38 runpilot2-wrapper.sh
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc      5111 Mar  4 05:40 queuedata.json
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc       100 Mar 12 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 23:15:37] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 22:25 run_atlas
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc       105 Mar 12 22:25 job.xml
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc      7579 Mar 12 22:25 init_data.xml
[2026-03-12 23:15:37] -rw-r--r-- 2 boinc boinc 190952608 Mar 12 22:25 EVNT.48700888._000128.pool.root.1
[2026-03-12 23:15:37] -rw-r--r-- 2 boinc boinc     15845 Mar 12 22:25 start_atlas.sh
[2026-03-12 23:15:37] drwxrwx--x 2 boinc boinc      4096 Mar 12 22:25 shared
[2026-03-12 23:15:37] -rw-r--r-- 2 boinc boinc    597930 Mar 12 22:25 input.tar.gz
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc         0 Mar 12 22:25 boinc_lockfile
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc      2511 Mar 12 22:25 pandaJob.out
[2026-03-12 23:15:37] -rw------- 1 boinc boinc        50 Mar 12 22:25 setup.sh.local
[2026-03-12 23:15:37] -rw------- 1 boinc boinc   1006522 Mar 12 22:25 agis_schedconf.cvmfs.json
[2026-03-12 23:15:37] -rw------- 1 boinc boinc   1511578 Mar 12 22:25 agis_ddmendpoints.agis.ALL.json
[2026-03-12 23:15:37] -rw------- 1 boinc boinc       429 Mar 12 22:25 workernode_map.json
[2026-03-12 23:15:37] drwx------ 5 boinc boinc      4096 Mar 12 22:25 pilot3
[2026-03-12 23:15:37] -rw------- 1 boinc boinc 148744963 Mar 12 23:14 HITS.48700890._003203.pool.root.1
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc       529 Mar 12 23:14 boinc_task_state.xml
[2026-03-12 23:15:37] -rw------- 1 boinc boinc      1027 Mar 12 23:14 memory_monitor_summary.json
[2026-03-12 23:15:37] -rw------- 1 boinc boinc    349222 Mar 12 23:14 log.48700890._003203.job.log.tgz.1
[2026-03-12 23:15:37] -rw------- 1 boinc boinc      6338 Mar 12 23:14 heartbeat.json
[2026-03-12 23:15:37] -rw------- 1 boinc boinc        95 Mar 12 23:15 pilot_heartbeat.json
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc      8192 Mar 12 23:15 boinc_mmap_file
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc        27 Mar 12 23:15 wrapper_checkpoint.txt
[2026-03-12 23:15:37] -rw------- 1 boinc boinc      4898 Mar 12 23:15 pilotlog.txt
[2026-03-12 23:15:37] -rw------- 1 boinc boinc    459963 Mar 12 23:15 log.48700890._003203.job.log.1
[2026-03-12 23:15:37] -rw------- 1 boinc boinc       357 Mar 12 23:15 output.list
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc       620 Mar 12 23:15 runtime_log
[2026-03-12 23:15:37] -rw------- 1 boinc boinc    829440 Mar 12 23:15 result.tar.gz
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc      9403 Mar 12 23:15 runtime_log.err
[2026-03-12 23:15:37] -rw------- 1 boinc boinc       648 Mar 12 23:15 69HNDm5nyH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkBKLDmIBn4Pn.diag
[2026-03-12 23:15:37] -rw-r--r-- 1 boinc boinc     21009 Mar 12 23:15 stderr.txt
[2026-03-12 23:15:37] HITS file was successfully produced:
[2026-03-12 23:15:37] -rw------- 1 boinc boinc 148744963 Mar 12 23:14 shared/HITS.pool.root.1
[2026-03-12 23:15:37]  *** Contents of shared directory: ***
[2026-03-12 23:15:37] total 333160
[2026-03-12 23:15:37] -rw-r--r-- 2 boinc boinc 190952608 Mar 12 22:25 ATLAS.root_0
[2026-03-12 23:15:37] -rw-r--r-- 2 boinc boinc     15845 Mar 12 22:25 start_atlas.sh
[2026-03-12 23:15:37] -rw-r--r-- 2 boinc boinc    597930 Mar 12 22:25 input.tar.gz
[2026-03-12 23:15:37] -rw------- 1 boinc boinc 148744963 Mar 12 23:14 HITS.pool.root.1
[2026-03-12 23:15:37] -rw------- 1 boinc boinc    829440 Mar 12 23:15 result.tar.gz
23:15:38 (565996): run_atlas exited; CPU time 28430.224800
23:15:38 (565996): called boinc_finish(0)

</stderr_txt>
]]>

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