Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:25:56 (9926): wrapper (7.7.26015): starting
18:25:56 (9926): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 18:25:56] Arguments: --nthreads 8
[2026-03-12 18:25:56] Threads: 8
[2026-03-12 18:25:56] Checking for CVMFS
[2026-03-12 18:25:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 18:25:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 18:25:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 18:25:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 18:25:56] 2.11.0.0 4320 218467 75036 157210 0 187 2756685 4096000 1162 130560 16 5984191 99.409 10402260 366 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-12 18:25:56] CVMFS is ok
[2026-03-12 18:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 18:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 18:25:56] Further information can be found at the LHC@home message board.
[2026-03-12 18:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 18:25:56] Checking for apptainer binary...
[2026-03-12 18:25:56] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-12 18:25:56] apptainer is not installed, using version from CVMFS
[2026-03-12 18:25:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 18:25:56] WARNING: Environment variable TMPDIR already has value [/tmp/job_11300818/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node351
[2026-03-12 18:25:56] apptainer works
[2026-03-12 18:25:56] Set ATHENA_PROC_NUMBER=8
[2026-03-12 18:25:56] Set ATHENA_CORE_NUMBER=8
[2026-03-12 18:25:56] Starting ATLAS job with PandaID=7051653103
[2026-03-12 18:25:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11300818/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 20:15:20]  *** The last 200 lines of the pilot log: ***
[2026-03-12 20:15:20] 2026-03-12 19:14:10,711 | INFO     | time since job start (6488s) is within the limit (345600.0s)
[2026-03-12 20:15:20] 2026-03-12 19:14:10,976 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 20:15:20] 2026-03-12 19:14:12,288 | INFO     | job 7051653103 has state=finished
[2026-03-12 20:15:20] 2026-03-12 19:14:12,288 | INFO     | preparing for final server update for job 7051653103 in state='finished'
[2026-03-12 20:15:20] 2026-03-12 19:14:12,289 | INFO     | reading metadata from: /tmp/job_11300818/atlas/pilot/slots/0/PanDA_Pilot-7051653103/jobReport.json
[2026-03-12 20:15:20] 2026-03-12 19:14:12,290 | INFO     | added worker_node to metadata from /tmp/job_11300818/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 20:15:20] 2026-03-12 19:14:12,290 | INFO     | this job has now completed (state=finished)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,290 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,290 | INFO     | log transfer has been attempted: DONE
[2026-03-12 20:15:20] 2026-03-12 19:14:12,290 | INFO     | job 7051653103 has finished - writing final server update
[2026-03-12 20:15:20] 2026-03-12 19:14:12,290 | INFO     | total number of processed events: 400 (read)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,307 | INFO     | using path: /tmp/job_11300818/atlas/pilot/slots/0/PanDA_Pilot-7051653103/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,307 | INFO     | extracted standard info from prmon json
[2026-03-12 20:15:20] 2026-03-12 19:14:12,307 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:15:20] 2026-03-12 19:14:12,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:15:20] 2026-03-12 19:14:12,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:15:20] 2026-03-12 19:14:12,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:15:20] 2026-03-12 19:14:12,308 | INFO     | fitting pss+swap vs Time
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | sum of square deviations: 369281342.5
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | sum of deviations: 4333957157.999999
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | mean x: 1773339581.5
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | mean y: 2566155.5849056602
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | intersect: -20809689672.927868
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | chi2: 1.1267853329850968
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | sum of square deviations: 319447850.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | sum of deviations: 4176705441.000001
[2026-03-12 20:15:20] 2026-03-12 19:14:12,309 | INFO     | mean x: 1773339429.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | mean y: 2565674.0198019804
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | intersect: -23183429917.57405
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | chi2: 1.128401661141031
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | current chi2=1.128401661141031 (change=-0.1434459704629155 %)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | right removable region: 100
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | sum of square deviations: 319447850.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | sum of deviations: -7113189930.999999
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | mean x: 1773339734.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | mean y: 2600163.7722772276
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | intersect: 39489803912.77549
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | chi2: 0.014276602452108473
[2026-03-12 20:15:20] 2026-03-12 19:14:12,310 | INFO     | current chi2=0.014276602452108473 (change=98.7329793853203 %)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | sum of square deviations: 274312120.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | sum of deviations: -6140729913.5
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | mean x: 1773339886.5
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | mean y: 2596909.6979166665
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | intersect: 39700446526.5258
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | chi2: 0.013844255022649172
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | current chi2=0.013844255022649172 (change=3.028363582369339 %)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | left removable region: 20
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | sum of square deviations: 158737860.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | sum of deviations: -3868879555.0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | mean x: 1773340008.5
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | mean y: 2589568.15
[2026-03-12 20:15:20] 2026-03-12 19:14:12,311 | INFO     | intersect: 43223777651.1264
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | chi2: 0.011463389275088888
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | current memory leak: -24.37 B/s (using 80 data points, chi2=0.01)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | could have reported an average CPU frequency of 2505 MHz (7 samples)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | ..............................
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . Timing measurements:
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . get job = 0 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . initial setup = 2 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . payload setup = 2 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . stage-in = 0 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . payload execution = 6468 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . stage-out = 0 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | . log creation = 0 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,312 | INFO     | ..............................
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | 
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | job summary report
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | --------------------------------------------------
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | PanDA job id: 7051653103
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | task id: 48967067
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | errors: (none)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | pilot state: finished 
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | transexitcode: 0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | exeerrorcode: 0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | exeerrordiag: 
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | exitcode: 0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | exitmsg: OK
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | cpuconsumptiontime: 46651 s
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | nevents: 400
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | neventsw: 0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | pid: 18755
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | pgrp: 18755
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | corecount: 8
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | event service: False
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | sizes: {0: 2279862, 1: 2280434, 11: 2280434, 6474: 2307664, 6475: 2316692, 6478: 2316748, 6479: 2317070}
[2026-03-12 20:15:20] 2026-03-12 19:14:12,359 | INFO     | --------------------------------------------------
[2026-03-12 20:15:20] 2026-03-12 19:14:12,360 | INFO     | 
[2026-03-12 20:15:20] 2026-03-12 19:14:12,360 | INFO     | executing command: ls -lF /tmp/job_11300818/atlas/pilot/slots/0
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | job 7051653103 has completed (purged errors)
[2026-03-12 20:15:20] 2026-03-12 19:14:12,369 | INFO     | overall cleanup function is called
[2026-03-12 20:15:20] 2026-03-12 19:14:13,375 | INFO     | --- collectZombieJob: --- 10, [18755]
[2026-03-12 20:15:20] 2026-03-12 19:14:13,375 | INFO     | zombie collector waiting for pid 18755
[2026-03-12 20:15:20] 2026-03-12 19:14:13,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 20:15:20] 2026-03-12 19:14:13,375 | INFO     | collected zombie processes
[2026-03-12 20:15:20] 2026-03-12 19:14:13,375 | INFO     | will attempt to kill all subprocesses of pid=18755
[2026-03-12 20:15:20] 2026-03-12 19:14:13,468 | INFO     | process IDs to be killed: [18755] (in reverse order)
[2026-03-12 20:15:20] 2026-03-12 19:14:13,500 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 20:15:20] 2026-03-12 19:14:13,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 20:15:20] 2026-03-12 19:14:13,503 | INFO     | did not find any defunct processes belonging to 18755
[2026-03-12 20:15:20] 2026-03-12 19:14:13,506 | INFO     | did not find any defunct processes belonging to 18755
[2026-03-12 20:15:20] 2026-03-12 19:14:13,506 | INFO     | ready for new job
[2026-03-12 20:15:20] 2026-03-12 19:14:13,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 20:15:20] 2026-03-12 19:14:13,507 | INFO     | **************************************
[2026-03-12 20:15:20] 2026-03-12 19:14:13,507 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 20:15:20] 2026-03-12 19:14:13,507 | INFO     | **************************************
[2026-03-12 20:15:20] 2026-03-12 19:14:13,507 | INFO     | 
[2026-03-12 20:15:20] 2026-03-12 19:14:13,521 | INFO     | architecture information:
[2026-03-12 20:15:20] 2026-03-12 19:14:13,521 | INFO     | executing command: cat /etc/os-release
[2026-03-12 20:15:20] 2026-03-12 19:14:13,527 | INFO     | cat /etc/os-release:
[2026-03-12 20:15:20] NAME="CentOS Linux"
[2026-03-12 20:15:20] VERSION="7 (Core)"
[2026-03-12 20:15:20] ID="centos"
[2026-03-12 20:15:20] ID_LIKE="rhel fedora"
[2026-03-12 20:15:20] VERSION_ID="7"
[2026-03-12 20:15:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 20:15:20] ANSI_COLOR="0;31"
[2026-03-12 20:15:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 20:15:20] HOME_URL="https://www.centos.org/"
[2026-03-12 20:15:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 20:15:20] 
[2026-03-12 20:15:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 20:15:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 20:15:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 20:15:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 20:15:20] 
[2026-03-12 20:15:20] 2026-03-12 19:14:13,527 | INFO     | **************************************
[2026-03-12 20:15:20] 2026-03-12 19:14:14,030 | INFO     | executing command: df -mP /tmp/job_11300818/atlas/pilot/slots/0
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | INFO     | sufficient remaining disk space (226006925312 B)
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | INFO     | update_server=False
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:15:20] 2026-03-12 19:14:14,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 20:15:20] 2026-03-12 19:14:14,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:15:20] 2026-03-12 19:14:14,038 | INFO     | aborting loop
[2026-03-12 20:15:20] 2026-03-12 19:14:14,725 | INFO     | all data control threads have been joined
[2026-03-12 20:15:20] 2026-03-12 19:14:14,735 | INFO     | all payload control threads have been joined
[2026-03-12 20:15:20] 2026-03-12 19:14:14,936 | INFO     | all job control threads have been joined
[2026-03-12 20:15:20] 2026-03-12 19:14:15,041 | INFO     | [job] retrieve thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,041 | INFO     | [job] queue monitor thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,043 | INFO     | [job] job monitor thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,388 | INFO     | [payload] failed_post thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,653 | INFO     | [data] copytool_in thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,730 | INFO     | [data] control thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,739 | INFO     | [payload] control thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,820 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,870 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,896 | INFO     | [job] validate thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:15,941 | INFO     | [job] control thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:16,041 | INFO     | [data] copytool_out thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:16,094 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:16,418 | INFO     | [payload] validate_post thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:17,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 20:15:20] 2026-03-12 19:14:21,033 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 20:15:20] 2026-03-12 19:14:43,896 | INFO     | PID=13986 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 20:15:20] 2026-03-12 19:14:43,896 | INFO     | .. there are 2 such processes running
[2026-03-12 20:15:20] 2026-03-12 19:14:43,897 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 20:15:20] 2026-03-12 19:14:43,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 20:15:20] 2026-03-12 19:14:43,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 20:15:20] 2026-03-12 19:15:12,895 | INFO     | [monitor] cgroup control has ended
[2026-03-12 20:15:20] 2026-03-12 19:15:14,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-12 20:15:20] 2026-03-12 19:15:15,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 20:15:20] 2026-03-12 19:15:15,053 | INFO     | [monitor] control thread has ended
[2026-03-12 20:15:20] 2026-03-12 19:15:19,826 | INFO     | all workflow threads have been joined
[2026-03-12 20:15:20] 2026-03-12 19:15:19,826 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 20:15:20] 2026-03-12 19:15:19,826 | INFO     | traces error code: 0
[2026-03-12 20:15:20] 2026-03-12 19:15:19,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 20:15:20] 2026-03-12 19:15:19,893 [wrapper] ==== pilot stdout END ====
[2026-03-12 20:15:20] 2026-03-12 19:15:19,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 20:15:20] 2026-03-12 19:15:19,895 [wrapper] pilotpid: 13986
[2026-03-12 20:15:20] 2026-03-12 19:15:19,896 [wrapper] Pilot exit status: 0
[2026-03-12 20:15:20] 2026-03-12 19:15:19,900 [wrapper] pandaids: 7051653103
[2026-03-12 20:15:20] 2026-03-12 19:15:19,926 [wrapper] cleanup supervisor_pilot 19750 13987
[2026-03-12 20:15:20] 2026-03-12 19:15:19,928 [wrapper] Test setup, not cleaning
[2026-03-12 20:15:20] 2026-03-12 19:15:19,929 [wrapper] apfmon messages muted
[2026-03-12 20:15:20] 2026-03-12 19:15:19,930 [wrapper] ==== wrapper stdout END ====
[2026-03-12 20:15:20] 2026-03-12 19:15:19,930 [wrapper] ==== wrapper stderr END ====
[2026-03-12 20:15:20]  *** Error codes and diagnostics ***
[2026-03-12 20:15:20]     "exeErrorCode": 0,
[2026-03-12 20:15:20]     "exeErrorDiag": "",
[2026-03-12 20:15:20]     "pilotErrorCode": 0,
[2026-03-12 20:15:20]     "pilotErrorDiag": "",
[2026-03-12 20:15:20]  *** Listing of results directory ***
[2026-03-12 20:15:20] total 514612
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      5111 Mar 12 11:21 queuedata.json
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user    585013 Mar 12 11:21 pilot3.tar.gz
[2026-03-12 20:15:20] -rwx------ 1 mf493845 unix-user     36322 Mar 12 11:21 runpilot2-wrapper.sh
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user       100 Mar 12 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 20:15:20] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 12 17:25 run_atlas
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user       105 Mar 12 17:25 job.xml
[2026-03-12 20:15:20] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 18:25 start_atlas.sh
[2026-03-12 20:15:20] drwxrwx--x 2 mf493845 unix-user       100 Mar 12 18:25 shared
[2026-03-12 20:15:20] -rw-r--r-- 2 mf493845 unix-user    597549 Mar 12 18:25 input.tar.gz
[2026-03-12 20:15:20] -rw-r--r-- 2 mf493845 unix-user 237139713 Mar 12 18:25 EVNT.48967065._000083.pool.root.1
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user         0 Mar 12 18:25 boinc_setup_complete
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      6390 Mar 12 18:25 init_data.xml
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      8192 Mar 12 18:25 boinc_mmap_file
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user         0 Mar 12 18:25 boinc_lockfile
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      2614 Mar 12 18:25 pandaJob.out
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user   1006522 Mar 12 18:25 agis_schedconf.cvmfs.json
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user   1511578 Mar 12 18:26 agis_ddmendpoints.agis.ALL.json
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user       416 Mar 12 18:26 workernode_map.json
[2026-03-12 20:15:20] drwx------ 5 mf493845 unix-user       440 Mar 12 18:26 pilot3
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user 283301876 Mar 12 20:13 HITS.48967067._002113.pool.root.1
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      1020 Mar 12 20:14 memory_monitor_summary.json
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user    346691 Mar 12 20:14 log.48967067._002113.job.log.tgz.1
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      6313 Mar 12 20:14 heartbeat.json
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user        95 Mar 12 20:14 pilot_heartbeat.json
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      4831 Mar 12 20:15 pilotlog.txt
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user    959877 Mar 12 20:15 log.48967067._002113.job.log.1
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user       357 Mar 12 20:15 output.list
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user       620 Mar 12 20:15 runtime_log
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user   1320960 Mar 12 20:15 result.tar.gz
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user      9219 Mar 12 20:15 runtime_log.err
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user       644 Mar 12 20:15 QwJNDmcLsK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0XmLDmHef5vm.diag
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user     21754 Mar 12 20:15 stderr.txt
[2026-03-12 20:15:20] HITS file was successfully produced:
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user 283301876 Mar 12 20:13 shared/HITS.pool.root.1
[2026-03-12 20:15:20]  *** Contents of shared directory: ***
[2026-03-12 20:15:20] total 510140
[2026-03-12 20:15:20] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 18:25 start_atlas.sh
[2026-03-12 20:15:20] -rw-r--r-- 2 mf493845 unix-user    597549 Mar 12 18:25 input.tar.gz
[2026-03-12 20:15:20] -rw-r--r-- 2 mf493845 unix-user 237139713 Mar 12 18:25 ATLAS.root_0
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user 283301876 Mar 12 20:13 HITS.pool.root.1
[2026-03-12 20:15:20] -rw------- 1 mf493845 unix-user   1320960 Mar 12 20:15 result.tar.gz
20:15:21 (9926): run_atlas exited; CPU time 46733.322007
20:15:21 (9926): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN