Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:43:40 (2428298): wrapper (7.7.26015): starting
11:43:40 (2428298): wrapper: running run_atlas (--nthreads 10)
[2026-03-12 11:43:40] Arguments: --nthreads 10
[2026-03-12 11:43:40] Threads: 10
[2026-03-12 11:43:40] Checking for CVMFS
[2026-03-12 11:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 11:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 11:43:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 11:43:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 11:43:42] 2.13.3.0 9597 112133 289400 157205 3 988 39580968 40960000 43401 16776704 0 805252259 99.702 617382109 43750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 11:43:42] CVMFS is ok
[2026-03-12 11:43:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 11:43:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 11:43:42] Further information can be found at the LHC@home message board.
[2026-03-12 11:43:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 11:43:42] Checking for apptainer binary...
[2026-03-12 11:43:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 11:43:42] Running /usr/bin/apptainer --version
[2026-03-12 11:43:42] apptainer version 1.4.5-2.el9
[2026-03-12 11:43:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 11:43:42] c-208-38.aglt2.org
[2026-03-12 11:43:42] apptainer works
[2026-03-12 11:43:42] Set ATHENA_PROC_NUMBER=10
[2026-03-12 11:43:42] Set ATHENA_CORE_NUMBER=10
[2026-03-12 11:43:42] Starting ATLAS job with PandaID=7038578337
[2026-03-12 11:43:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 13:02:32]  *** The last 200 lines of the pilot log: ***
[2026-03-12 13:02:32]  status=None
[2026-03-12 13:02:32]  status_code=0
[2026-03-12 13:02:32]  storage_token=
[2026-03-12 13:02:32]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-7038578337/log.48700858._003146.job.log.tgz.1
[2026-03-12 13:02:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/bd/log.48700858._003146.job.log.tgz.1
[2026-03-12 13:02:32]  workdir=None
[2026-03-12 13:02:32] ]
[2026-03-12 13:02:32] 2026-03-12 17:01:31,306 | INFO     | transferring file log.48700858._003146.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-7038578337/log.48700858._003146.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-12 13:02:32] 2026-03-12 17:01:31,306 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-7038578337/log.48700858._003146.job.log.tgz.1 /tmp/boinchome/slots/4/log.48700858._003146.job
[2026-03-12 13:02:32] 2026-03-12 17:01:31,355 | INFO     | adding to output.list: log.48700858._003146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/bd/log.48700858._003146.job.log.tg
[2026-03-12 13:02:32] 2026-03-12 17:01:31,356 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 13:02:32] 2026-03-12 17:01:31,356 | INFO     | summary of transferred files:
[2026-03-12 13:02:32] 2026-03-12 17:01:31,356 | INFO     |  -- lfn=log.48700858._003146.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 13:02:32] 2026-03-12 17:01:31,356 | INFO     | stage-out finished correctly
[2026-03-12 13:02:32] 2026-03-12 17:01:31,468 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 13:02:32] 2026-03-12 17:01:34,298 | INFO     | job 7038578337 has state=finished
[2026-03-12 13:02:32] 2026-03-12 17:01:34,298 | INFO     | preparing for final server update for job 7038578337 in state='finished'
[2026-03-12 13:02:32] 2026-03-12 17:01:34,504 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,504 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7038578337/jobReport.json
[2026-03-12 13:02:32] 2026-03-12 17:01:34,515 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-03-12 13:02:32] 2026-03-12 17:01:34,515 | INFO     | this job has now completed (state=finished)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,515 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,515 | INFO     | log transfer has been attempted: DONE
[2026-03-12 13:02:32] 2026-03-12 17:01:34,515 | INFO     | job 7038578337 has finished - writing final server update
[2026-03-12 13:02:32] 2026-03-12 17:01:34,515 | INFO     | total number of processed events: 400 (read)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,665 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7038578337/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,665 | INFO     | extracted standard info from prmon json
[2026-03-12 13:02:32] 2026-03-12 17:01:34,665 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 13:02:32] 2026-03-12 17:01:34,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 13:02:32] 2026-03-12 17:01:34,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 13:02:32] 2026-03-12 17:01:34,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | fitting pss+swap vs Time
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | sum of square deviations: 93237650.62686554
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | sum of deviations: 1246956265.4179103
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | mean x: 1773332716.074627
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | mean y: 2556746.7164179105
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | intersect: -23713917511.405445
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | chi2: 0.10912228259298623
[2026-03-12 13:02:32] 2026-03-12 17:01:34,667 | INFO     | current memory leak: 13.37 B/s (using 67 data points, chi2=0.11)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | ..............................
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . Timing measurements:
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . get job = 0 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . initial setup = 33 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . payload setup = 39 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . stage-in = 0 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . payload execution = 4515 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . stage-out = 1 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | . log creation = 0 s
[2026-03-12 13:02:32] 2026-03-12 17:01:34,733 | INFO     | ..............................
[2026-03-12 13:02:32] 2026-03-12 17:01:35,033 | INFO     | 
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | job summary report
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | --------------------------------------------------
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | PanDA job id: 7038578337
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | task id: 48700858
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | errors: (none)
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | pilot state: finished 
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | transexitcode: 0
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | exeerrorcode: 0
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | exeerrordiag: 
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | exitcode: 0
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | exitmsg: OK
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | cpuconsumptiontime: 17680 s
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | nevents: 400
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | neventsw: 0
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | pid: 2446845
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | pgrp: 2446845
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | corecount: 10
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | event service: False
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | sizes: {0: 2279038, 1: 2279723, 2: 2280184, 13: 2280184, 4559: 2306314, 4561: 2315496, 4564: 2315634}
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | --------------------------------------------------
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | 
[2026-03-12 13:02:32] 2026-03-12 17:01:35,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | job 7038578337 has completed (purged errors)
[2026-03-12 13:02:32] 2026-03-12 17:01:35,096 | INFO     | overall cleanup function is called
[2026-03-12 13:02:32] 2026-03-12 17:01:36,103 | INFO     | --- collectZombieJob: --- 10, [2446845]
[2026-03-12 13:02:32] 2026-03-12 17:01:36,104 | INFO     | zombie collector waiting for pid 2446845
[2026-03-12 13:02:32] 2026-03-12 17:01:36,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 13:02:32] 2026-03-12 17:01:36,104 | INFO     | collected zombie processes
[2026-03-12 13:02:32] 2026-03-12 17:01:36,104 | INFO     | will attempt to kill all subprocesses of pid=2446845
[2026-03-12 13:02:32] 2026-03-12 17:01:36,376 | INFO     | PID=2438741 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 13:02:32] 2026-03-12 17:01:36,376 | INFO     | .. there are 49 such processes running
[2026-03-12 13:02:32] 2026-03-12 17:01:36,701 | WARNING  | process 2446845 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 13:02:32] 2026-03-12 17:01:37,901 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 13:02:32] 2026-03-12 17:01:37,910 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 13:02:32] 2026-03-12 17:01:37,910 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 13:02:32] 2026-03-12 17:01:37,915 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 13:02:32] 2026-03-12 17:01:37,915 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/4/PanDA_Pilot-7038578337/payload.stdout) since it has not been created yet
[2026-03-12 13:02:32] 2026-03-12 17:01:37,915 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-12 13:02:32] 2026-03-12 17:01:37,973 | INFO     | sufficient remaining disk space (170217439232 B)
[2026-03-12 13:02:32] 2026-03-12 17:01:37,973 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-12 13:02:32] 2026-03-12 17:01:37,973 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-7038578337/HITS.48700858._003146.pool.root.1 since it does not exist
[2026-03-12 13:02:32] 2026-03-12 17:01:38,161 | INFO     | process IDs to be killed: [2446845] (in reverse order)
[2026-03-12 13:02:32] 2026-03-12 17:01:38,497 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 13:02:32] 2026-03-12 17:01:38,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 13:02:32] 2026-03-12 17:01:38,617 | INFO     | did not find any defunct processes belonging to 2446845
[2026-03-12 13:02:32] 2026-03-12 17:01:38,930 | INFO     | did not find any defunct processes belonging to 2446845
[2026-03-12 13:02:32] 2026-03-12 17:01:38,930 | INFO     | ready for new job
[2026-03-12 13:02:32] 2026-03-12 17:01:38,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 13:02:32] 2026-03-12 17:01:39,002 | INFO     | **************************************
[2026-03-12 13:02:32] 2026-03-12 17:01:39,002 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 13:02:32] 2026-03-12 17:01:39,002 | INFO     | **************************************
[2026-03-12 13:02:32] 2026-03-12 17:01:39,002 | INFO     | 
[2026-03-12 13:02:32] 2026-03-12 17:01:39,032 | INFO     | architecture information:
[2026-03-12 13:02:32] 2026-03-12 17:01:39,051 | INFO     | executing command: cat /etc/os-release
[2026-03-12 13:02:32] 2026-03-12 17:01:39,089 | INFO     | cat /etc/os-release:
[2026-03-12 13:02:32] NAME="CentOS Linux"
[2026-03-12 13:02:32] VERSION="7 (Core)"
[2026-03-12 13:02:32] ID="centos"
[2026-03-12 13:02:32] ID_LIKE="rhel fedora"
[2026-03-12 13:02:32] VERSION_ID="7"
[2026-03-12 13:02:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 13:02:32] ANSI_COLOR="0;31"
[2026-03-12 13:02:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 13:02:32] HOME_URL="https://www.centos.org/"
[2026-03-12 13:02:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 13:02:32] 
[2026-03-12 13:02:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 13:02:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 13:02:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 13:02:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 13:02:32] 
[2026-03-12 13:02:32] 2026-03-12 17:01:39,089 | INFO     | **************************************
[2026-03-12 13:02:32] 2026-03-12 17:01:39,617 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-12 13:02:32] 2026-03-12 17:01:39,752 | INFO     | sufficient remaining disk space (170217439232 B)
[2026-03-12 13:02:32] 2026-03-12 17:01:39,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 13:02:32] 2026-03-12 17:01:39,752 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 13:02:32] 2026-03-12 17:01:39,752 | INFO     | update_server=False
[2026-03-12 13:02:32] 2026-03-12 17:01:39,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 13:02:32] 2026-03-12 17:01:39,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 13:02:32] 2026-03-12 17:01:40,046 | INFO     | all data control threads have been joined
[2026-03-12 13:02:32] 2026-03-12 17:01:40,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:02:32] 2026-03-12 17:01:40,448 | INFO     | all payload control threads have been joined
[2026-03-12 13:02:32] 2026-03-12 17:01:40,453 | INFO     | number of running child processes to parent process 2446845: 1
[2026-03-12 13:02:32] 2026-03-12 17:01:40,453 | INFO     | maximum number of monitored processes: 7
[2026-03-12 13:02:32] 2026-03-12 17:01:40,453 | INFO     | aborting job monitoring since job object (job id=7038578337) has expired
[2026-03-12 13:02:32] 2026-03-12 17:01:40,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:02:32] 2026-03-12 17:01:40,454 | INFO     | will abort loop
[2026-03-12 13:02:32] 2026-03-12 17:01:40,758 | INFO     | [job] retrieve thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,052 | INFO     | [data] control thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,095 | INFO     | [job] queue monitor thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,118 | INFO     | [data] copytool_in thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,122 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,277 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,453 | INFO     | [payload] control thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,460 | INFO     | [job] job monitor thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,562 | INFO     | all job control threads have been joined
[2026-03-12 13:02:32] 2026-03-12 17:01:41,630 | INFO     | [job] validate thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,757 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,760 | INFO     | [data] copytool_out thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,866 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,951 | INFO     | [payload] validate_post thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:41,960 | INFO     | [payload] failed_post thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:42,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 13:02:32] 2026-03-12 17:01:42,571 | INFO     | [job] control thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:01:46,193 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 13:02:32] 2026-03-12 17:02:09,209 | INFO     | PID=2438741 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 13:02:32] 2026-03-12 17:02:09,209 | INFO     | .. there are 49 such processes running
[2026-03-12 13:02:32] 2026-03-12 17:02:09,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 13:02:32] 2026-03-12 17:02:09,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 13:02:32] 2026-03-12 17:02:09,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 13:02:32] 2026-03-12 17:02:24,755 | INFO     | [monitor] cgroup control has ended
[2026-03-12 13:02:32] 2026-03-12 17:02:25,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453102618432)>', '<ExcThread(monitor, started 140452745443072)>']
[2026-03-12 13:02:32] 2026-03-12 17:02:26,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 13:02:32] 2026-03-12 17:02:26,318 | INFO     | [monitor] control thread has ended
[2026-03-12 13:02:32] 2026-03-12 17:02:30,605 | INFO     | all workflow threads have been joined
[2026-03-12 13:02:32] 2026-03-12 17:02:30,605 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 13:02:32] 2026-03-12 17:02:30,605 | INFO     | traces error code: 0
[2026-03-12 13:02:32] 2026-03-12 17:02:30,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 13:02:32] 2026-03-12 17:02:31,231 [wrapper] ==== pilot stdout END ====
[2026-03-12 13:02:32] 2026-03-12 17:02:31,271 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 13:02:32] 2026-03-12 17:02:31,321 [wrapper] pilotpid: 2438741
[2026-03-12 13:02:32] 2026-03-12 17:02:31,396 [wrapper] Pilot exit status: 0
[2026-03-12 13:02:32] 2026-03-12 17:02:31,560 [wrapper] pandaids: 7038578337
[2026-03-12 13:02:32] 2026-03-12 17:02:32,113 [wrapper] cleanup supervisor_pilot 2815931 2438742
[2026-03-12 13:02:32] 2026-03-12 17:02:32,132 [wrapper] Test setup, not cleaning
[2026-03-12 13:02:32] 2026-03-12 17:02:32,228 [wrapper] apfmon messages muted
[2026-03-12 13:02:32] 2026-03-12 17:02:32,255 [wrapper] ==== wrapper stdout END ====
[2026-03-12 13:02:32] 2026-03-12 17:02:32,269 [wrapper] ==== wrapper stderr END ====
[2026-03-12 13:02:32]  *** Error codes and diagnostics ***
[2026-03-12 13:02:32]     "exeErrorCode": 0,
[2026-03-12 13:02:32]     "exeErrorDiag": "",
[2026-03-12 13:02:32]     "pilotErrorCode": 0,
[2026-03-12 13:02:32]     "pilotErrorDiag": "",
[2026-03-12 13:02:32]  *** Listing of results directory ***
[2026-03-12 13:02:32] total 330584
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 04:32 pilot3.tar.gz
[2026-03-12 13:02:32] -rwx------. 1 boincer umatlas     36322 Mar  4 04:33 runpilot2-wrapper.sh
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 04:34 queuedata.json
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas       100 Mar 12 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 13:02:32] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 11:43 run_atlas
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas       105 Mar 12 11:43 job.xml
[2026-03-12 13:02:32] -rw-r--r--. 2 boincer umatlas 186867498 Mar 12 11:43 EVNT.48700856._000122.pool.root.1
[2026-03-12 13:02:32] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 11:43 start_atlas.sh
[2026-03-12 13:02:32] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 11:43 shared
[2026-03-12 13:02:32] -rw-r--r--. 2 boincer umatlas    597941 Mar 12 11:43 input.tar.gz
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas         0 Mar 12 11:43 boinc_lockfile
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas      2521 Mar 12 11:43 pandaJob.out
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas        57 Mar 12 11:43 setup.sh.local
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas   1006536 Mar 12 11:44 agis_schedconf.cvmfs.json
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas   1511578 Mar 12 11:44 agis_ddmendpoints.agis.ALL.json
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas       432 Mar 12 11:45 workernode_map.json
[2026-03-12 13:02:32] drwx------. 5 boincer umatlas      4096 Mar 12 11:45 pilot3
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas 145756671 Mar 12 13:00 HITS.48700858._003146.pool.root.1
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas       529 Mar 12 13:00 boinc_task_state.xml
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas        95 Mar 12 13:01 pilot_heartbeat.json
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas      1045 Mar 12 13:01 memory_monitor_summary.json
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas    366847 Mar 12 13:01 log.48700858._003146.job.log.tgz.1
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas      6359 Mar 12 13:01 heartbeat.json
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas      7185 Mar 12 13:02 init_data.xml
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 13:02 boinc_mmap_file
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas        27 Mar 12 13:02 wrapper_checkpoint.txt
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas      5111 Mar 12 13:02 pilotlog.txt
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas    613705 Mar 12 13:02 log.48700858._003146.job.log.1
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas       357 Mar 12 13:02 output.list
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas       620 Mar 12 13:02 runtime_log
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas    993280 Mar 12 13:02 result.tar.gz
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas      9343 Mar 12 13:02 runtime_log.err
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas       656 Mar 12 13:02 3fTLDmZmxH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmz2JLDmm5Y3im.diag
[2026-03-12 13:02:32] -rw-r--r--. 1 boincer umatlas     22311 Mar 12 13:02 stderr.txt
[2026-03-12 13:02:32] HITS file was successfully produced:
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas 145756671 Mar 12 13:00 shared/HITS.pool.root.1
[2026-03-12 13:02:32]  *** Contents of shared directory: ***
[2026-03-12 13:02:32] total 326408
[2026-03-12 13:02:32] -rw-r--r--. 2 boincer umatlas 186867498 Mar 12 11:43 ATLAS.root_0
[2026-03-12 13:02:32] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 11:43 start_atlas.sh
[2026-03-12 13:02:32] -rw-r--r--. 2 boincer umatlas    597941 Mar 12 11:43 input.tar.gz
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas 145756671 Mar 12 13:00 HITS.pool.root.1
[2026-03-12 13:02:32] -rw-------. 1 boincer umatlas    993280 Mar 12 13:02 result.tar.gz
13:02:34 (2428298): run_atlas exited; CPU time 17831.747305
13:02:34 (2428298): called boinc_finish(0)

</stderr_txt>
]]>

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