Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:03:48 (14963): wrapper (7.7.26015): starting
11:03:48 (14963): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 11:03:48] Arguments: --nthreads 8
[2026-03-12 11:03:48] Threads: 8
[2026-03-12 11:03:48] Checking for CVMFS
[2026-03-12 11:03:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 11:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 11:03:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 11:03:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 11:03:48] 2.11.2.0 26356 260377 152116 157203 1 188 18212512 18432000 1833 130560 0 171706977 99.983 9826988 22813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 11:03:48] CVMFS is ok
[2026-03-12 11:03:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 11:03:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 11:03:48] Further information can be found at the LHC@home message board.
[2026-03-12 11:03:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 11:03:48] Checking for apptainer binary...
[2026-03-12 11:03:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 11:03:48] Running /usr/bin/apptainer --version
[2026-03-12 11:03:48] apptainer version 1.3.2-1.el7
[2026-03-12 11:03:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 11:03:49] c-206-6.aglt2.org
[2026-03-12 11:03:49] apptainer works
[2026-03-12 11:03:49] Set ATHENA_PROC_NUMBER=8
[2026-03-12 11:03:49] Set ATHENA_CORE_NUMBER=8
[2026-03-12 11:03:49] Starting ATLAS job with PandaID=7051417445
[2026-03-12 11:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 15:37:38]  *** The last 200 lines of the pilot log: ***
[2026-03-12 15:37:38] 2026-03-12 19:37:02,616 | INFO     | mean y: 2496312.524163569
[2026-03-12 15:37:38] 2026-03-12 19:37:02,616 | INFO     | intersect: -17815965543.167694
[2026-03-12 15:37:38] 2026-03-12 19:37:02,617 | INFO     | chi2: 2.3127011922001577
[2026-03-12 15:37:38] 2026-03-12 19:37:02,617 | INFO     | sum of square deviations: 5705372090.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,620 | INFO     | sum of deviations: 77318643018.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,620 | INFO     | mean x: 1773335887.5
[2026-03-12 15:37:38] 2026-03-12 19:37:02,620 | INFO     | mean y: 2503882.356060606
[2026-03-12 15:37:38] 2026-03-12 19:37:02,620 | INFO     | intersect: -24029570147.82708
[2026-03-12 15:37:38] 2026-03-12 19:37:02,621 | INFO     | chi2: 1.5287560415842394
[2026-03-12 15:37:38] 2026-03-12 19:37:02,621 | INFO     | current chi2=1.5287560415842394 (change=33.897381696341085 %)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,622 | INFO     | sum of square deviations: 5387301010.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,624 | INFO     | sum of deviations: 75522447571.00005
[2026-03-12 15:37:38] 2026-03-12 19:37:02,624 | INFO     | mean x: 1773335735.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,624 | INFO     | mean y: 2503021.0656370656
[2026-03-12 15:37:38] 2026-03-12 19:37:02,625 | INFO     | intersect: -24857191067.6295
[2026-03-12 15:37:38] 2026-03-12 19:37:02,625 | INFO     | chi2: 1.5280216278431602
[2026-03-12 15:37:38] 2026-03-12 19:37:02,625 | INFO     | current chi2=1.5280216278431602 (change=0.04803995674274617 %)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,626 | INFO     | right removable region: 258
[2026-03-12 15:37:38] 2026-03-12 19:37:02,626 | INFO     | sum of square deviations: 5705372090.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,629 | INFO     | sum of deviations: 17363123753.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,629 | INFO     | mean x: 1773336192.5
[2026-03-12 15:37:38] 2026-03-12 19:37:02,629 | INFO     | mean y: 2516143.553030303
[2026-03-12 15:37:38] 2026-03-12 19:37:02,629 | INFO     | intersect: -5394266972.489333
[2026-03-12 15:37:38] 2026-03-12 19:37:02,630 | INFO     | chi2: 0.9018938378570737
[2026-03-12 15:37:38] 2026-03-12 19:37:02,630 | INFO     | current chi2=0.9018938378570737 (change=61.00257824491935 %)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,630 | INFO     | sum of square deviations: 5387301010.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,633 | INFO     | sum of deviations: 2447788053.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,633 | INFO     | mean x: 1773336345.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,633 | INFO     | mean y: 2523303.864864865
[2026-03-12 15:37:38] 2026-03-12 19:37:02,633 | INFO     | intersect: -803214395.0653247
[2026-03-12 15:37:38] 2026-03-12 19:37:02,634 | INFO     | chi2: 0.8031747694723312
[2026-03-12 15:37:38] 2026-03-12 19:37:02,634 | INFO     | current chi2=0.8031747694723312 (change=10.945752619765297 %)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,634 | INFO     | left removable region: 20
[2026-03-12 15:37:38] 2026-03-12 19:37:02,635 | INFO     | sum of square deviations: 4180243959.5
[2026-03-12 15:37:38] 2026-03-12 19:37:02,637 | INFO     | sum of deviations: 13508449024.0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,637 | INFO     | mean x: 1773336314.5
[2026-03-12 15:37:38] 2026-03-12 19:37:02,637 | INFO     | mean y: 2534234.2016806724
[2026-03-12 15:37:38] 2026-03-12 19:37:02,638 | INFO     | intersect: -5727998107.67067
[2026-03-12 15:37:38] 2026-03-12 19:37:02,638 | INFO     | chi2: 0.003273968899680541
[2026-03-12 15:37:38] 2026-03-12 19:37:02,639 | INFO     | current memory leak: 3.23 B/s (using 238 data points, chi2=0.00)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,639 | INFO     | could have reported an average CPU frequency of 2483 MHz (13 samples)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,639 | INFO     | ..............................
[2026-03-12 15:37:38] 2026-03-12 19:37:02,640 | INFO     | . Timing measurements:
[2026-03-12 15:37:38] 2026-03-12 19:37:02,640 | INFO     | . get job = 0 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,640 | INFO     | . initial setup = 6 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,640 | INFO     | . payload setup = 5 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,640 | INFO     | . stage-in = 0 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,640 | INFO     | . payload execution = 16352 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,641 | INFO     | time since job start (16377s) is within the limit (345600.0s)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,641 | INFO     | . stage-out = 2 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,641 | INFO     | . log creation = 0 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,641 | INFO     | ..............................
[2026-03-12 15:37:38] 2026-03-12 19:37:02,743 | INFO     | 
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | job summary report
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | --------------------------------------------------
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | PanDA job id: 7051417445
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | task id: 48997968
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | errors: (none)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | pilot state: finished 
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | transexitcode: 0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,744 | INFO     | exeerrorcode: 0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | exeerrordiag: 
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | exitcode: 0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | exitmsg: OK
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | cpuconsumptiontime: 124035 s
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | nevents: 400
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | neventsw: 0
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | pid: 23393
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | pgrp: 23393
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | corecount: 8
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | event service: False
[2026-03-12 15:37:38] 2026-03-12 19:37:02,745 | INFO     | sizes: {0: 2279157, 1: 2280069, 2: 2280275, 12: 2280303, 16361: 2311885, 16364: 2321067, 16366: 2321205}
[2026-03-12 15:37:38] 2026-03-12 19:37:02,746 | INFO     | --------------------------------------------------
[2026-03-12 15:37:38] 2026-03-12 19:37:02,746 | INFO     | 
[2026-03-12 15:37:38] 2026-03-12 19:37:02,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,760 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,760 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 15:37:38] 2026-03-12 19:37:02,760 | INFO     | job 7051417445 has completed (purged errors)
[2026-03-12 15:37:38] 2026-03-12 19:37:02,760 | INFO     | overall cleanup function is called
[2026-03-12 15:37:38] 2026-03-12 19:37:03,341 | WARNING  | process 23393 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 15:37:38] 2026-03-12 19:37:03,474 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 15:37:38] 2026-03-12 19:37:03,475 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 15:37:38] 2026-03-12 19:37:03,476 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 15:37:38] 2026-03-12 19:37:03,476 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 15:37:38] 2026-03-12 19:37:03,477 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7051417445/payload.stdout) since it has not been created yet
[2026-03-12 15:37:38] 2026-03-12 19:37:03,477 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 15:37:38] 2026-03-12 19:37:03,492 | INFO     | sufficient remaining disk space (26778533888 B)
[2026-03-12 15:37:38] 2026-03-12 19:37:03,493 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-12 15:37:38] 2026-03-12 19:37:03,493 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7051417445/HITS.48997968._003049.pool.root.1 since it does not exist
[2026-03-12 15:37:38] 2026-03-12 19:37:03,635 | INFO     | number of running child processes to parent process 23393: 1
[2026-03-12 15:37:38] 2026-03-12 19:37:03,636 | INFO     | maximum number of monitored processes: 6
[2026-03-12 15:37:38] 2026-03-12 19:37:03,636 | INFO     | aborting job monitoring since job object (job id=7051417445) has expired
[2026-03-12 15:37:38] 2026-03-12 19:37:03,765 | INFO     | --- collectZombieJob: --- 10, [23393]
[2026-03-12 15:37:38] 2026-03-12 19:37:03,765 | INFO     | zombie collector waiting for pid 23393
[2026-03-12 15:37:38] 2026-03-12 19:37:03,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 15:37:38] 2026-03-12 19:37:03,765 | INFO     | collected zombie processes
[2026-03-12 15:37:38] 2026-03-12 19:37:03,766 | INFO     | will attempt to kill all subprocesses of pid=23393
[2026-03-12 15:37:38] 2026-03-12 19:37:03,916 | INFO     | process IDs to be killed: [23393] (in reverse order)
[2026-03-12 15:37:38] 2026-03-12 19:37:03,973 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 15:37:38] 2026-03-12 19:37:03,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 15:37:38] 2026-03-12 19:37:03,979 | INFO     | did not find any defunct processes belonging to 23393
[2026-03-12 15:37:38] 2026-03-12 19:37:03,984 | INFO     | did not find any defunct processes belonging to 23393
[2026-03-12 15:37:38] 2026-03-12 19:37:03,984 | INFO     | ready for new job
[2026-03-12 15:37:38] 2026-03-12 19:37:03,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 15:37:38] 2026-03-12 19:37:03,986 | INFO     | **************************************
[2026-03-12 15:37:38] 2026-03-12 19:37:03,987 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 15:37:38] 2026-03-12 19:37:03,987 | INFO     | **************************************
[2026-03-12 15:37:38] 2026-03-12 19:37:03,987 | INFO     | 
[2026-03-12 15:37:38] 2026-03-12 19:37:03,988 | INFO     | architecture information:
[2026-03-12 15:37:38] 2026-03-12 19:37:03,988 | INFO     | executing command: cat /etc/os-release
[2026-03-12 15:37:38] 2026-03-12 19:37:04,003 | INFO     | cat /etc/os-release:
[2026-03-12 15:37:38] NAME="CentOS Linux"
[2026-03-12 15:37:38] VERSION="7 (Core)"
[2026-03-12 15:37:38] ID="centos"
[2026-03-12 15:37:38] ID_LIKE="rhel fedora"
[2026-03-12 15:37:38] VERSION_ID="7"
[2026-03-12 15:37:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 15:37:38] ANSI_COLOR="0;31"
[2026-03-12 15:37:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 15:37:38] HOME_URL="https://www.centos.org/"
[2026-03-12 15:37:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 15:37:38] 
[2026-03-12 15:37:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 15:37:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 15:37:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 15:37:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 15:37:38] 
[2026-03-12 15:37:38] 2026-03-12 19:37:04,004 | INFO     | **************************************
[2026-03-12 15:37:38] 2026-03-12 19:37:04,507 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 15:37:38] 2026-03-12 19:37:04,521 | INFO     | sufficient remaining disk space (26780631040 B)
[2026-03-12 15:37:38] 2026-03-12 19:37:04,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 15:37:38] 2026-03-12 19:37:04,522 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 15:37:38] 2026-03-12 19:37:04,522 | INFO     | update_server=False
[2026-03-12 15:37:38] 2026-03-12 19:37:04,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 15:37:38] 2026-03-12 19:37:04,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:37:38] 2026-03-12 19:37:04,523 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-12 15:37:38] 2026-03-12 19:37:04,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 15:37:38] 2026-03-12 19:37:04,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:37:38] 2026-03-12 19:37:04,523 | INFO     | will abort loop
[2026-03-12 15:37:38] 2026-03-12 19:37:04,523 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 15:37:38] 2026-03-12 19:37:04,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 15:37:38] 2026-03-12 19:37:04,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 15:37:38] 2026-03-12 19:37:04,771 | INFO     | all data control threads have been joined
[2026-03-12 15:37:38] 2026-03-12 19:37:05,149 | INFO     | all payload control threads have been joined
[2026-03-12 15:37:38] 2026-03-12 19:37:05,204 | INFO     | all job control threads have been joined
[2026-03-12 15:37:38] 2026-03-12 19:37:05,528 | INFO     | [job] retrieve thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,529 | INFO     | [job] job monitor thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,529 | INFO     | [job] queue monitor thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,542 | INFO     | [data] copytool_in thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,553 | INFO     | [job] validate thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,719 | INFO     | [payload] validate_post thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,774 | INFO     | [data] control thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,929 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:05,941 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:06,154 | INFO     | [payload] control thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:06,210 | INFO     | [job] control thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:06,516 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:06,530 | INFO     | [data] copytool_out thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:06,720 | INFO     | [payload] failed_post thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:07,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 15:37:38] 2026-03-12 19:37:11,320 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:15,275 | INFO     | job.realtimelogging is not enabled
[2026-03-12 15:37:38] 2026-03-12 19:37:16,280 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 15:37:38] 2026-03-12 19:37:31,662 | INFO     | [monitor] cgroup control has ended
[2026-03-12 15:37:38] 2026-03-12 19:37:33,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741408851776)>', '<ExcThread(monitor, started 139740829435648)>']
[2026-03-12 15:37:38] 2026-03-12 19:37:33,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 15:37:38] 2026-03-12 19:37:33,667 | INFO     | [monitor] control thread has ended
[2026-03-12 15:37:38] 2026-03-12 19:37:38,244 | INFO     | all workflow threads have been joined
[2026-03-12 15:37:38] 2026-03-12 19:37:38,244 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 15:37:38] 2026-03-12 19:37:38,244 | INFO     | traces error code: 0
[2026-03-12 15:37:38] 2026-03-12 19:37:38,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 15:37:38] 2026-03-12 19:37:38,362 [wrapper] ==== pilot stdout END ====
[2026-03-12 15:37:38] 2026-03-12 19:37:38,365 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 15:37:38] 2026-03-12 19:37:38,368 [wrapper] pilotpid: 18927
[2026-03-12 15:37:38] 2026-03-12 19:37:38,370 [wrapper] Pilot exit status: 0
[2026-03-12 15:37:38] 2026-03-12 19:37:38,379 [wrapper] pandaids: 7051417445
[2026-03-12 15:37:38] 2026-03-12 19:37:38,404 [wrapper] cleanup supervisor_pilot 25625 18928
[2026-03-12 15:37:38] 2026-03-12 19:37:38,407 [wrapper] Test setup, not cleaning
[2026-03-12 15:37:38] 2026-03-12 19:37:38,409 [wrapper] apfmon messages muted
[2026-03-12 15:37:38] 2026-03-12 19:37:38,411 [wrapper] ==== wrapper stdout END ====
[2026-03-12 15:37:38] 2026-03-12 19:37:38,413 [wrapper] ==== wrapper stderr END ====
[2026-03-12 15:37:38]  *** Error codes and diagnostics ***
[2026-03-12 15:37:38]     "exeErrorCode": 0,
[2026-03-12 15:37:38]     "exeErrorDiag": "",
[2026-03-12 15:37:38]     "pilotErrorCode": 0,
[2026-03-12 15:37:38]     "pilotErrorDiag": "",
[2026-03-12 15:37:38]  *** Listing of results directory ***
[2026-03-12 15:37:38] total 644960
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas    585013 Mar 12 01:40 pilot3.tar.gz
[2026-03-12 15:37:38] -rwx------ 1 boincer umatlas     36322 Mar 12 01:41 runpilot2-wrapper.sh
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas      5111 Mar 12 01:41 queuedata.json
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas       100 Mar 12 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 15:37:38] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 11:03 run_atlas
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas       105 Mar 12 11:03 job.xml
[2026-03-12 15:37:38] -rw-r--r-- 2 boincer umatlas 363705217 Mar 12 11:03 EVNT.48997965._000119.pool.root.1
[2026-03-12 15:37:38] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 11:03 start_atlas.sh
[2026-03-12 15:37:38] drwxrwx--x 2 boincer umatlas      4096 Mar 12 11:03 shared
[2026-03-12 15:37:38] -rw-r--r-- 2 boincer umatlas    597535 Mar 12 11:03 input.tar.gz
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas         0 Mar 12 11:03 boinc_lockfile
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas      2574 Mar 12 11:03 pandaJob.out
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas        57 Mar 12 11:03 setup.sh.local
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas   1006554 Mar 12 11:03 agis_schedconf.cvmfs.json
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas       444 Mar 12 11:04 workernode_map.json
[2026-03-12 15:37:38] drwx------ 5 boincer umatlas      4096 Mar 12 11:04 pilot3
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas      5952 Mar 12 15:31 init_data.xml
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas 287192152 Mar 12 15:36 HITS.48997968._003049.pool.root.1
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas       533 Mar 12 15:36 boinc_task_state.xml
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas        95 Mar 12 15:36 pilot_heartbeat.json
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas      1054 Mar 12 15:36 memory_monitor_summary.json
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas   1511578 Mar 12 15:36 agis_ddmendpoints.agis.ALL.json
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas    504228 Mar 12 15:37 log.48997968._003049.job.log.tgz.1
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas      6425 Mar 12 15:37 heartbeat.json
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 15:37 boinc_mmap_file
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas        29 Mar 12 15:37 wrapper_checkpoint.txt
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas      4622 Mar 12 15:37 pilotlog.txt
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas   2294829 Mar 12 15:37 log.48997968._003049.job.log.1
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas       357 Mar 12 15:37 output.list
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas       620 Mar 12 15:37 runtime_log
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas   2816000 Mar 12 15:37 result.tar.gz
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas       662 Mar 12 15:37 wiQNDmhynK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4QjLDmQqGvhm.diag
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas      9337 Mar 12 15:37 runtime_log.err
[2026-03-12 15:37:38] -rw-r--r-- 1 boincer umatlas     21353 Mar 12 15:37 stderr.txt
[2026-03-12 15:37:38] HITS file was successfully produced:
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas 287192152 Mar 12 15:36 shared/HITS.pool.root.1
[2026-03-12 15:37:38]  *** Contents of shared directory: ***
[2026-03-12 15:37:38] total 639004
[2026-03-12 15:37:38] -rw-r--r-- 2 boincer umatlas 363705217 Mar 12 11:03 ATLAS.root_0
[2026-03-12 15:37:38] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 11:03 start_atlas.sh
[2026-03-12 15:37:38] -rw-r--r-- 2 boincer umatlas    597535 Mar 12 11:03 input.tar.gz
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas 287192152 Mar 12 15:36 HITS.pool.root.1
[2026-03-12 15:37:38] -rw------- 1 boincer umatlas   2816000 Mar 12 15:37 result.tar.gz
15:37:39 (14963): run_atlas exited; CPU time 124256.398979
15:37:39 (14963): called boinc_finish(0)

</stderr_txt>
]]>

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