Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:05:58 (3079581): wrapper (7.7.26015): starting
15:05:58 (3079581): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 15:05:58] Arguments: --nthreads 12
[2026-03-16 15:05:58] Threads: 12
[2026-03-16 15:05:58] Checking for CVMFS
[2026-03-16 15:05:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 15:05:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 15:05:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 15:06:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 15:06:00] 2.13.3.0 3534869 3375 77448 157351 0 188 2623785 4096001 17319 130560 0 20374123 99.999 112015 4495 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-16 15:06:00] CVMFS is ok
[2026-03-16 15:06:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 15:06:00] Checking for apptainer binary...
[2026-03-16 15:06:00] apptainer is not installed, using version from CVMFS
[2026-03-16 15:06:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 15:06:01] epyc7v12
[2026-03-16 15:06:01] apptainer works
[2026-03-16 15:06:01] Set ATHENA_PROC_NUMBER=12
[2026-03-16 15:06:01] Set ATHENA_CORE_NUMBER=12
[2026-03-16 15:06:02] Starting ATLAS job with PandaID=7039014737
[2026-03-16 15:06:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31431/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 16:44:21]  *** The last 200 lines of the pilot log: ***
[2026-03-16 16:44:21]  scope=mc23_13p6TeV
[2026-03-16 16:44:21]  status=None
[2026-03-16 16:44:21]  status_code=0
[2026-03-16 16:44:21]  storage_token=
[2026-03-16 16:44:21]  surl=/opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/log.48700874._002499.job.log.tgz.1
[2026-03-16 16:44:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/4a/log.48700874._002499.job.log.tgz.1
[2026-03-16 16:44:21]  workdir=None
[2026-03-16 16:44:21] ]
[2026-03-16 16:44:21] 2026-03-16 16:43:44,533 | INFO     | transferring file log.48700874._002499.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/log.48700874._002499.job.log.tgz.1 t
[2026-03-16 16:44:21] 2026-03-16 16:43:44,533 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/log.48700874._002499.job.log.tgz.1 /opt/boinc/instance_home
[2026-03-16 16:44:21] 2026-03-16 16:43:44,571 | INFO     | adding to output.list: log.48700874._002499.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/4a/log.48700874._002499.job.log.tg
[2026-03-16 16:44:21] 2026-03-16 16:43:44,572 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 16:44:21] 2026-03-16 16:43:44,572 | INFO     | summary of transferred files:
[2026-03-16 16:44:21] 2026-03-16 16:43:44,572 | INFO     |  -- lfn=log.48700874._002499.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 16:44:21] 2026-03-16 16:43:44,573 | INFO     | stage-out finished correctly
[2026-03-16 16:44:21] 2026-03-16 16:43:45,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 16:44:21] 2026-03-16 16:43:45,543 | INFO     | job 7039014737 has state=finished
[2026-03-16 16:44:21] 2026-03-16 16:43:45,543 | INFO     | preparing for final server update for job 7039014737 in state='finished'
[2026-03-16 16:44:21] 2026-03-16 16:43:46,166 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,169 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/jobReport.json
[2026-03-16 16:44:21] 2026-03-16 16:43:46,174 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31431/slots/0/workernode_map.json
[2026-03-16 16:44:21] 2026-03-16 16:43:46,174 | INFO     | this job has now completed (state=finished)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,174 | INFO     | log transfer has been attempted: DONE
[2026-03-16 16:44:21] 2026-03-16 16:43:46,174 | INFO     | job 7039014737 has finished - writing final server update
[2026-03-16 16:44:21] 2026-03-16 16:43:46,175 | INFO     | total number of processed events: 400 (read)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,236 | INFO     | using path: /opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,237 | INFO     | extracted standard info from prmon json
[2026-03-16 16:44:21] 2026-03-16 16:43:46,237 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 16:44:21] 2026-03-16 16:43:46,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 16:44:21] 2026-03-16 16:43:46,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 16:44:21] 2026-03-16 16:43:46,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 16:44:21] 2026-03-16 16:43:46,243 | INFO     | fitting pss+swap vs Time
[2026-03-16 16:44:21] 2026-03-16 16:43:46,244 | INFO     | sum of square deviations: 211273381.81818137
[2026-03-16 16:44:21] 2026-03-16 16:43:46,244 | INFO     | sum of deviations: 4882278024.545453
[2026-03-16 16:44:21] 2026-03-16 16:43:46,244 | INFO     | mean x: 1773676603.5454545
[2026-03-16 16:44:21] 2026-03-16 16:43:46,244 | INFO     | mean y: 2633344.2386363638
[2026-03-16 16:44:21] 2026-03-16 16:43:46,245 | INFO     | intersect: -40984935603.71664
[2026-03-16 16:44:21] 2026-03-16 16:43:46,245 | INFO     | chi2: 0.08882061011638091
[2026-03-16 16:44:21] 2026-03-16 16:43:46,245 | INFO     | current memory leak: 23.11 B/s (using 88 data points, chi2=0.09)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,245 | INFO     | could have reported an average CPU frequency of 2396 MHz (7 samples)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | ..............................
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . Timing measurements:
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . get job = 0 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . initial setup = 23 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . payload setup = 16 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . stage-in = 0 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . payload execution = 5786 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . stage-out = 1 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | . log creation = 0 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,246 | INFO     | ..............................
[2026-03-16 16:44:21] 2026-03-16 16:43:46,414 | INFO     | 
[2026-03-16 16:44:21] 2026-03-16 16:43:46,414 | INFO     | job summary report
[2026-03-16 16:44:21] 2026-03-16 16:43:46,414 | INFO     | --------------------------------------------------
[2026-03-16 16:44:21] 2026-03-16 16:43:46,414 | INFO     | PanDA job id: 7039014737
[2026-03-16 16:44:21] 2026-03-16 16:43:46,415 | INFO     | task id: 48700874
[2026-03-16 16:44:21] 2026-03-16 16:43:46,415 | INFO     | errors: (none)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,415 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | pilot state: finished 
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | transexitcode: 0
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | exeerrorcode: 0
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | exeerrordiag: 
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | exitcode: 0
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | exitmsg: OK
[2026-03-16 16:44:21] 2026-03-16 16:43:46,417 | INFO     | cpuconsumptiontime: 35780 s
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | nevents: 400
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | neventsw: 0
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | pid: 3088912
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | pgrp: 3088912
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | corecount: 12
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | event service: False
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | sizes: {0: 2279796, 1: 2280257, 5807: 2307039, 5809: 2316139, 5810: 2316277}
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | --------------------------------------------------
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | 
[2026-03-16 16:44:21] 2026-03-16 16:43:46,418 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31431/slots/0
[2026-03-16 16:44:21] 2026-03-16 16:43:46,467 | INFO     | time since job start (5812s) is within the limit (349056.0s)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,472 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,472 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,476 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,476 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 16:44:21] 2026-03-16 16:43:46,476 | INFO     | job 7039014737 has completed (purged errors)
[2026-03-16 16:44:21] 2026-03-16 16:43:46,476 | INFO     | overall cleanup function is called
[2026-03-16 16:44:21] 2026-03-16 16:43:47,493 | INFO     | --- collectZombieJob: --- 10, [3088912]
[2026-03-16 16:44:21] 2026-03-16 16:43:47,493 | INFO     | zombie collector waiting for pid 3088912
[2026-03-16 16:44:21] 2026-03-16 16:43:47,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 16:44:21] 2026-03-16 16:43:47,494 | INFO     | collected zombie processes
[2026-03-16 16:44:21] 2026-03-16 16:43:47,494 | INFO     | will attempt to kill all subprocesses of pid=3088912
[2026-03-16 16:44:21] 2026-03-16 16:43:49,008 | WARNING  | process 3088912 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 16:44:21] 2026-03-16 16:43:49,186 | INFO     | process IDs to be killed: [3088912] (in reverse order)
[2026-03-16 16:44:21] 2026-03-16 16:43:49,622 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 16:44:21] 2026-03-16 16:43:49,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 16:44:21] 2026-03-16 16:43:49,659 | INFO     | did not find any defunct processes belonging to 3088912
[2026-03-16 16:44:21] 2026-03-16 16:43:49,695 | INFO     | did not find any defunct processes belonging to 3088912
[2026-03-16 16:44:21] 2026-03-16 16:43:49,696 | INFO     | ready for new job
[2026-03-16 16:44:21] 2026-03-16 16:43:49,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 16:44:21] 2026-03-16 16:43:49,700 | INFO     | **************************************
[2026-03-16 16:44:21] 2026-03-16 16:43:49,700 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 16:44:21] 2026-03-16 16:43:49,700 | INFO     | **************************************
[2026-03-16 16:44:21] 2026-03-16 16:43:49,700 | INFO     | 
[2026-03-16 16:44:21] 2026-03-16 16:43:49,717 | INFO     | architecture information:
[2026-03-16 16:44:21] 2026-03-16 16:43:49,728 | INFO     | executing command: cat /etc/os-release
[2026-03-16 16:44:21] 2026-03-16 16:43:49,776 | INFO     | cat /etc/os-release:
[2026-03-16 16:44:21] NAME="CentOS Linux"
[2026-03-16 16:44:21] VERSION="7 (Core)"
[2026-03-16 16:44:21] ID="centos"
[2026-03-16 16:44:21] ID_LIKE="rhel fedora"
[2026-03-16 16:44:21] VERSION_ID="7"
[2026-03-16 16:44:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 16:44:21] ANSI_COLOR="0;31"
[2026-03-16 16:44:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 16:44:21] HOME_URL="https://www.centos.org/"
[2026-03-16 16:44:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 16:44:21] 
[2026-03-16 16:44:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 16:44:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 16:44:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 16:44:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 16:44:21] 
[2026-03-16 16:44:21] 2026-03-16 16:43:49,777 | INFO     | **************************************
[2026-03-16 16:44:21] 2026-03-16 16:43:49,848 | INFO     | using path: /opt/boinc/instance_homes/boinc_31431/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 16:44:21] 2026-03-16 16:43:49,849 | INFO     | using path: /opt/boinc/instance_homes/boinc_31431/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 16:44:21] 2026-03-16 16:43:49,850 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-16 16:44:21] 2026-03-16 16:43:49,850 | WARNING  | maxPSS not found in memory monitor output
[2026-03-16 16:44:21] 2026-03-16 16:43:49,850 | INFO     | skipping file size check of payload stdout file (/opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/payload.stdout) since it has not been created
[2026-03-16 16:44:21] 2026-03-16 16:43:49,851 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31431/slots/0
[2026-03-16 16:44:21] 2026-03-16 16:43:49,874 | INFO     | sufficient remaining disk space (155666350080 B)
[2026-03-16 16:44:21] 2026-03-16 16:43:49,875 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-16 16:44:21] 2026-03-16 16:43:49,875 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31431/slots/0/PanDA_Pilot-7039014737/HITS.48700874._002499.pool.root.1 since it does n
[2026-03-16 16:44:21] 2026-03-16 16:43:50,281 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31431/slots/0
[2026-03-16 16:44:21] 2026-03-16 16:43:50,322 | INFO     | sufficient remaining disk space (155666350080 B)
[2026-03-16 16:44:21] 2026-03-16 16:43:50,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 16:44:21] 2026-03-16 16:43:50,326 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 16:44:21] 2026-03-16 16:43:50,326 | INFO     | update_server=False
[2026-03-16 16:44:21] 2026-03-16 16:43:50,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 16:44:21] 2026-03-16 16:43:50,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 16:44:21] 2026-03-16 16:43:50,447 | INFO     | all data control threads have been joined
[2026-03-16 16:44:21] 2026-03-16 16:43:50,670 | INFO     | number of running child processes to parent process 3088912: 1
[2026-03-16 16:44:21] 2026-03-16 16:43:50,670 | INFO     | maximum number of monitored processes: 6
[2026-03-16 16:44:21] 2026-03-16 16:43:50,671 | INFO     | aborting job monitoring since job object (job id=7039014737) has expired
[2026-03-16 16:44:21] 2026-03-16 16:43:50,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 16:44:21] 2026-03-16 16:43:50,671 | INFO     | will abort loop
[2026-03-16 16:44:21] 2026-03-16 16:43:50,871 | INFO     | all job control threads have been joined
[2026-03-16 16:44:21] 2026-03-16 16:43:51,331 | INFO     | [job] retrieve thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,379 | INFO     | all payload control threads have been joined
[2026-03-16 16:44:21] 2026-03-16 16:43:51,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 16:44:21] 2026-03-16 16:43:51,452 | INFO     | [data] control thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,466 | INFO     | [job] validate thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 16:44:21] 2026-03-16 16:43:51,556 | INFO     | [data] copytool_in thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,677 | INFO     | [job] job monitor thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,759 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,876 | INFO     | [job] control thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:51,922 | INFO     | [payload] failed_post thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,091 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,332 | INFO     | [data] copytool_out thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,384 | INFO     | [payload] control thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,393 | INFO     | [job] queue monitor thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,440 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,450 | INFO     | [payload] validate_post thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:52,619 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:43:55,558 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 16:44:21] 2026-03-16 16:44:03,796 | INFO     | [monitor] cgroup control has ended
[2026-03-16 16:44:21] 2026-03-16 16:44:05,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132249554917184)>', '<ExcThread(monitor, started 132248888145664)>']
[2026-03-16 16:44:21] 2026-03-16 16:44:10,857 | INFO     | all workflow threads have been joined
[2026-03-16 16:44:21] 2026-03-16 16:44:10,857 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 16:44:21] 2026-03-16 16:44:10,858 | INFO     | traces error code: 0
[2026-03-16 16:44:21] 2026-03-16 16:44:10,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 16:44:21] 2026-03-16 16:44:20,656 | INFO     | PID=3083937 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-16 16:44:21] 2026-03-16 16:44:20,656 | INFO     | .. there are 20 such processes running
[2026-03-16 16:44:21] 2026-03-16 16:44:20,660 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 16:44:21] 2026-03-16 16:44:20,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 16:44:21] 2026-03-16 16:44:20,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 16:44:21] 2026-03-16 16:44:20,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 16:44:21] 2026-03-16 16:44:20,660 | INFO     | [monitor] control thread has ended
[2026-03-16 16:44:21] 2026-03-16 16:44:20,862 [wrapper] ==== pilot stdout END ====
[2026-03-16 16:44:21] 2026-03-16 16:44:20,869 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 16:44:21] 2026-03-16 16:44:20,878 [wrapper] pilotpid: 3083937
[2026-03-16 16:44:21] 2026-03-16 16:44:20,885 [wrapper] Pilot exit status: 0
[2026-03-16 16:44:21] 2026-03-16 16:44:20,920 [wrapper] pandaids: 7039014737
[2026-03-16 16:44:21] 2026-03-16 16:44:21,138 [wrapper] cleanup supervisor_pilot 3268736 3083938
[2026-03-16 16:44:21] 2026-03-16 16:44:21,144 [wrapper] Test setup, not cleaning
[2026-03-16 16:44:21] 2026-03-16 16:44:21,154 [wrapper] apfmon messages muted
[2026-03-16 16:44:21] 2026-03-16 16:44:21,162 [wrapper] ==== wrapper stdout END ====
[2026-03-16 16:44:21] 2026-03-16 16:44:21,171 [wrapper] ==== wrapper stderr END ====
[2026-03-16 16:44:21]  *** Error codes and diagnostics ***
[2026-03-16 16:44:21]     "exeErrorCode": 0,
[2026-03-16 16:44:21]     "exeErrorDiag": "",
[2026-03-16 16:44:21]     "pilotErrorCode": 0,
[2026-03-16 16:44:21]     "pilotErrorDiag": "",
[2026-03-16 16:44:21]  *** Listing of results directory ***
[2026-03-16 16:44:21] total 335036
[2026-03-16 16:44:21] -rw-r--r-- 1 boinc boinc    584627 Mar  4 10:35 pilot3.tar.gz
[2026-03-16 16:44:21] -rw-r--r-- 1 boinc boinc      5111 Mar  4 10:36 queuedata.json
[2026-03-16 16:44:21] -rwx------ 1 boinc boinc     36322 Mar  4 10:36 runpilot2-wrapper.sh
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc       100 Mar 16 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 16:44:21] -rwxr-xr-x 1 boinc boinc      7986 Mar 16 15:05 run_atlas
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc       105 Mar 16 15:05 job.xml
[2026-03-16 16:44:21] -rw-r--r-- 2 boinc boinc 190399645 Mar 16 15:05 EVNT.48700872._000098.pool.root.1
[2026-03-16 16:44:21] -rw-r--r-- 2 boinc boinc     15845 Mar 16 15:05 start_atlas.sh
[2026-03-16 16:44:21] drwxrwx--x 2 boinc boinc      4096 Mar 16 15:05 shared
[2026-03-16 16:44:21] -rw-r--r-- 2 boinc boinc    597959 Mar 16 15:05 input.tar.gz
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc         0 Mar 16 15:05 boinc_setup_complete
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc      6555 Mar 16 15:05 init_data.xml
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc         0 Mar 16 15:05 boinc_lockfile
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc      2550 Mar 16 15:06 pandaJob.out
[2026-03-16 16:44:21] -rw------- 1 boinc boinc   1006429 Mar 16 15:06 agis_schedconf.cvmfs.json
[2026-03-16 16:44:21] -rw------- 1 boinc boinc   1511579 Mar 16 15:06 agis_ddmendpoints.agis.ALL.json
[2026-03-16 16:44:21] -rw------- 1 boinc boinc       420 Mar 16 15:06 workernode_map.json
[2026-03-16 16:44:21] drwx------ 5 boinc boinc      4096 Mar 16 15:06 pilot3
[2026-03-16 16:44:21] -rw------- 1 boinc boinc 146302819 Mar 16 16:42 HITS.48700874._002499.pool.root.1
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc       530 Mar 16 16:42 boinc_task_state.xml
[2026-03-16 16:44:21] -rw------- 1 boinc boinc      1029 Mar 16 16:43 memory_monitor_summary.json
[2026-03-16 16:44:21] -rw------- 1 boinc boinc    392871 Mar 16 16:43 log.48700874._002499.job.log.tgz.1
[2026-03-16 16:44:21] -rw------- 1 boinc boinc      6280 Mar 16 16:43 heartbeat.json
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc        27 Mar 16 16:44 wrapper_checkpoint.txt
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc      8192 Mar 16 16:44 boinc_mmap_file
[2026-03-16 16:44:21] -rw------- 1 boinc boinc        95 Mar 16 16:44 pilot_heartbeat.json
[2026-03-16 16:44:21] -rw------- 1 boinc boinc       824 Mar 16 16:44 pilotlog.txt
[2026-03-16 16:44:21] -rw------- 1 boinc boinc    826733 Mar 16 16:44 log.48700874._002499.job.log.1
[2026-03-16 16:44:21] -rw------- 1 boinc boinc       357 Mar 16 16:44 output.list
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc       620 Mar 16 16:44 runtime_log
[2026-03-16 16:44:21] -rw------- 1 boinc boinc   1239040 Mar 16 16:44 result.tar.gz
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc      9166 Mar 16 16:44 runtime_log.err
[2026-03-16 16:44:21] -rw------- 1 boinc boinc       651 Mar 16 16:44 8ouMDmGmyH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmX6JLDm77eKen.diag
[2026-03-16 16:44:21] -rw-rw-r-- 1 boinc boinc     22087 Mar 16 16:44 stderr.txt
[2026-03-16 16:44:21] HITS file was successfully produced:
[2026-03-16 16:44:21] -rw------- 1 boinc boinc 146302819 Mar 16 16:42 shared/HITS.pool.root.1
[2026-03-16 16:44:21]  *** Contents of shared directory: ***
[2026-03-16 16:44:21] total 330636
[2026-03-16 16:44:21] -rw-r--r-- 2 boinc boinc 190399645 Mar 16 15:05 ATLAS.root_0
[2026-03-16 16:44:21] -rw-r--r-- 2 boinc boinc     15845 Mar 16 15:05 start_atlas.sh
[2026-03-16 16:44:21] -rw-r--r-- 2 boinc boinc    597959 Mar 16 15:05 input.tar.gz
[2026-03-16 16:44:21] -rw------- 1 boinc boinc 146302819 Mar 16 16:42 HITS.pool.root.1
[2026-03-16 16:44:21] -rw------- 1 boinc boinc   1239040 Mar 16 16:44 result.tar.gz
16:44:22 (3079581): run_atlas exited; CPU time 36096.655213
16:44:22 (3079581): called boinc_finish(0)

</stderr_txt>
]]>

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