Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:06:59 (2469): wrapper (7.7.26015): starting
01:06:59 (2469): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 01:06:59] Arguments: --nthreads 8
[2026-03-13 01:06:59] Threads: 8
[2026-03-13 01:06:59] Checking for CVMFS
[2026-03-13 01:07:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 01:07:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 01:07:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 01:07:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 01:07:03] 2.11.2.0 12460 125393 108004 157220 0 54 19398031 25165825 4784 130560 154 40032013 99.814 26929239 928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 01:07:03] CVMFS is ok
[2026-03-13 01:07:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 01:07:03] Checking for apptainer binary...
[2026-03-13 01:07:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 01:07:03] Running /usr/bin/apptainer --version
[2026-03-13 01:07:03] apptainer version 1.3.2-1.el7
[2026-03-13 01:07:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 01:07:25] cg-vwn485.simple-grid.lan
[2026-03-13 01:07:25] apptainer works
[2026-03-13 01:07:25] Set ATHENA_PROC_NUMBER=8
[2026-03-13 01:07:25] Set ATHENA_CORE_NUMBER=8
[2026-03-13 01:07:25] Starting ATLAS job with PandaID=7051529142
[2026-03-13 01:07:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 06:01:34]  *** The last 200 lines of the pilot log: ***
[2026-03-13 06:01:34] 2026-03-13 05:00:27,035 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 06:01:34] 2026-03-13 05:00:27,144 | INFO     | job 7051529142 has state=finished
[2026-03-13 06:01:34] 2026-03-13 05:00:27,144 | INFO     | preparing for final server update for job 7051529142 in state='finished'
[2026-03-13 06:01:34] 2026-03-13 05:00:27,145 | INFO     | reading metadata from: /var/lib/boinc/slots/11/PanDA_Pilot-7051529142/jobReport.json
[2026-03-13 06:01:34] 2026-03-13 05:00:27,147 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/11/workernode_map.json
[2026-03-13 06:01:34] 2026-03-13 05:00:27,148 | INFO     | this job has now completed (state=finished)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,148 | INFO     | log transfer has been attempted: DONE
[2026-03-13 06:01:34] 2026-03-13 05:00:27,148 | INFO     | job 7051529142 has finished - writing final server update
[2026-03-13 06:01:34] 2026-03-13 05:00:27,148 | INFO     | total number of processed events: 400 (read)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,150 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7051529142/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,151 | INFO     | extracted standard info from prmon json
[2026-03-13 06:01:34] 2026-03-13 05:00:27,151 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 06:01:34] 2026-03-13 05:00:27,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 06:01:34] 2026-03-13 05:00:27,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 06:01:34] 2026-03-13 05:00:27,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 06:01:34] 2026-03-13 05:00:27,157 | INFO     | fitting pss+swap vs Time
[2026-03-13 06:01:34] 2026-03-13 05:00:27,157 | INFO     | sum of square deviations: 6734191380.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,160 | INFO     | sum of deviations: 4350077261.999989
[2026-03-13 06:01:34] 2026-03-13 05:00:27,160 | INFO     | mean x: 1773369517.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,160 | INFO     | mean y: 2494120.7992831543
[2026-03-13 06:01:34] 2026-03-13 05:00:27,160 | INFO     | intersect: -1143047188.8724952
[2026-03-13 06:01:34] 2026-03-13 05:00:27,161 | INFO     | chi2: 5.22787214293538
[2026-03-13 06:01:34] 2026-03-13 05:00:27,161 | INFO     | sum of square deviations: 6378584712.5
[2026-03-13 06:01:34] 2026-03-13 05:00:27,164 | INFO     | sum of deviations: 22666878126.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,164 | INFO     | mean x: 1773369364.5
[2026-03-13 06:01:34] 2026-03-13 05:00:27,164 | INFO     | mean y: 2501860.7664233577
[2026-03-13 06:01:34] 2026-03-13 05:00:27,164 | INFO     | intersect: -6299326690.437218
[2026-03-13 06:01:34] 2026-03-13 05:00:27,165 | INFO     | chi2: 4.495037877065672
[2026-03-13 06:01:34] 2026-03-13 05:00:27,165 | INFO     | current chi2=4.495037877065672 (change=14.017830693507197 %)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,165 | INFO     | right removable region: 273
[2026-03-13 06:01:34] 2026-03-13 05:00:27,166 | INFO     | sum of square deviations: 6378584712.5
[2026-03-13 06:01:34] 2026-03-13 05:00:27,168 | INFO     | sum of deviations: -87149164081.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,168 | INFO     | mean x: 1773369669.5
[2026-03-13 06:01:34] 2026-03-13 05:00:27,168 | INFO     | mean y: 2533302.897810219
[2026-03-13 06:01:34] 2026-03-13 05:00:27,169 | INFO     | intersect: 24231683070.34699
[2026-03-13 06:01:34] 2026-03-13 05:00:27,169 | INFO     | chi2: 1.16349268525122
[2026-03-13 06:01:34] 2026-03-13 05:00:27,169 | INFO     | current chi2=1.16349268525122 (change=77.74443112914513 %)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,170 | INFO     | sum of square deviations: 6035722470.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,172 | INFO     | sum of deviations: -97520215110.99997
[2026-03-13 06:01:34] 2026-03-13 05:00:27,172 | INFO     | mean x: 1773369822.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,172 | INFO     | mean y: 2537870.8215613384
[2026-03-13 06:01:34] 2026-03-13 05:00:27,172 | INFO     | intersect: 28655181754.36244
[2026-03-13 06:01:34] 2026-03-13 05:00:27,173 | INFO     | chi2: 1.0313830809208042
[2026-03-13 06:01:34] 2026-03-13 05:00:27,173 | INFO     | current chi2=1.0313830809208042 (change=11.354571112055662 %)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,173 | INFO     | left removable region: 20
[2026-03-13 06:01:34] 2026-03-13 05:00:27,173 | INFO     | sum of square deviations: 5021496942.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,175 | INFO     | sum of deviations: -63724785881.00001
[2026-03-13 06:01:34] 2026-03-13 05:00:27,175 | INFO     | mean x: 1773369944.0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,175 | INFO     | mean y: 2539919.727272727
[2026-03-13 06:01:34] 2026-03-13 05:00:27,175 | INFO     | intersect: 22507307178.27138
[2026-03-13 06:01:34] 2026-03-13 05:00:27,176 | INFO     | chi2: 0.2373248088796886
[2026-03-13 06:01:34] 2026-03-13 05:00:27,176 | INFO     | current memory leak: -12.69 B/s (using 253 data points, chi2=0.24)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | ..............................
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . Timing measurements:
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . get job = 0 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . initial setup = 100 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . payload setup = 129 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . stage-in = 0 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . payload execution = 17101 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . stage-out = 3 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,177 | INFO     | . log creation = 1 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,178 | INFO     | ..............................
[2026-03-13 06:01:34] 2026-03-13 05:00:27,286 | INFO     | 
[2026-03-13 06:01:34] 2026-03-13 05:00:27,286 | INFO     | job summary report
[2026-03-13 06:01:34] 2026-03-13 05:00:27,286 | INFO     | --------------------------------------------------
[2026-03-13 06:01:34] 2026-03-13 05:00:27,286 | INFO     | PanDA job id: 7051529142
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | task id: 48967085
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | errors: (none)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | pilot state: finished 
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | transexitcode: 0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | exeerrorcode: 0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | exeerrordiag: 
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | exitcode: 0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,287 | INFO     | exitmsg: OK
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | cpuconsumptiontime: 67259 s
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | nevents: 400
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | neventsw: 0
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | pid: 11092
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | pgrp: 11092
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | corecount: 8
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | event service: False
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | sizes: {0: 2279086, 1: 2274633, 2: 2280233, 12: 2280233, 17236: 2312235, 17239: 2321235, 17241: 2321419, 17242: 2321613}
[2026-03-13 06:01:34] 2026-03-13 05:00:27,288 | INFO     | --------------------------------------------------
[2026-03-13 06:01:34] 2026-03-13 05:00:27,289 | INFO     | 
[2026-03-13 06:01:34] 2026-03-13 05:00:27,289 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-13 06:01:34] 2026-03-13 05:00:27,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,775 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,776 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 06:01:34] 2026-03-13 05:00:27,776 | INFO     | job 7051529142 has completed (purged errors)
[2026-03-13 06:01:34] 2026-03-13 05:00:27,776 | INFO     | overall cleanup function is called
[2026-03-13 06:01:34] 2026-03-13 05:00:28,784 | INFO     | --- collectZombieJob: --- 10, [11092]
[2026-03-13 06:01:34] 2026-03-13 05:00:28,785 | INFO     | zombie collector waiting for pid 11092
[2026-03-13 06:01:34] 2026-03-13 05:00:28,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 06:01:34] 2026-03-13 05:00:28,785 | INFO     | collected zombie processes
[2026-03-13 06:01:34] 2026-03-13 05:00:28,785 | INFO     | will attempt to kill all subprocesses of pid=11092
[2026-03-13 06:01:34] 2026-03-13 05:00:28,923 | INFO     | process IDs to be killed: [11092] (in reverse order)
[2026-03-13 06:01:34] 2026-03-13 05:00:29,757 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 06:01:34] 2026-03-13 05:00:29,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 06:01:34] 2026-03-13 05:00:29,761 | INFO     | did not find any defunct processes belonging to 11092
[2026-03-13 06:01:34] 2026-03-13 05:00:29,763 | INFO     | did not find any defunct processes belonging to 11092
[2026-03-13 06:01:34] 2026-03-13 05:00:29,764 | INFO     | ready for new job
[2026-03-13 06:01:34] 2026-03-13 05:00:29,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 06:01:34] 2026-03-13 05:00:29,766 | INFO     | **************************************
[2026-03-13 06:01:34] 2026-03-13 05:00:29,773 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 06:01:34] 2026-03-13 05:00:29,774 | INFO     | **************************************
[2026-03-13 06:01:34] 2026-03-13 05:00:29,774 | INFO     | 
[2026-03-13 06:01:34] 2026-03-13 05:00:29,774 | INFO     | pilot is running in a VM
[2026-03-13 06:01:34] 2026-03-13 05:00:29,774 | INFO     | architecture information:
[2026-03-13 06:01:34] 2026-03-13 05:00:29,783 | INFO     | executing command: cat /etc/os-release
[2026-03-13 06:01:34] 2026-03-13 05:00:30,095 | INFO     | cat /etc/os-release:
[2026-03-13 06:01:34] NAME="CentOS Linux"
[2026-03-13 06:01:34] VERSION="7 (Core)"
[2026-03-13 06:01:34] ID="centos"
[2026-03-13 06:01:34] ID_LIKE="rhel fedora"
[2026-03-13 06:01:34] VERSION_ID="7"
[2026-03-13 06:01:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 06:01:34] ANSI_COLOR="0;31"
[2026-03-13 06:01:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 06:01:34] HOME_URL="https://www.centos.org/"
[2026-03-13 06:01:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 06:01:34] 
[2026-03-13 06:01:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 06:01:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 06:01:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 06:01:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 06:01:34] 
[2026-03-13 06:01:34] 2026-03-13 05:00:30,095 | INFO     | **************************************
[2026-03-13 06:01:34] 2026-03-13 05:00:30,603 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-13 06:01:34] 2026-03-13 05:00:30,879 | INFO     | sufficient remaining disk space (496417898496 B)
[2026-03-13 06:01:34] 2026-03-13 05:00:30,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 06:01:34] 2026-03-13 05:00:30,879 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 06:01:34] 2026-03-13 05:00:30,880 | INFO     | update_server=False
[2026-03-13 06:01:34] 2026-03-13 05:00:30,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 06:01:34] 2026-03-13 05:00:30,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 06:01:34] 2026-03-13 05:00:30,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 06:01:34] 2026-03-13 05:00:30,885 | INFO     | aborting loop
[2026-03-13 06:01:34] 2026-03-13 05:00:31,390 | INFO     | all data control threads have been joined
[2026-03-13 06:01:34] 2026-03-13 05:00:31,886 | INFO     | [job] retrieve thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:31,891 | INFO     | [job] job monitor thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:31,914 | INFO     | all payload control threads have been joined
[2026-03-13 06:01:34] 2026-03-13 05:00:32,012 | INFO     | all job control threads have been joined
[2026-03-13 06:01:34] 2026-03-13 05:00:32,073 | INFO     | [payload] validate_post thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,109 | INFO     | [job] validate thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 06:01:34] 2026-03-13 05:00:32,397 | INFO     | [data] control thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,466 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,489 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,620 | INFO     | [data] copytool_in thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,848 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,887 | INFO     | [data] copytool_out thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:32,920 | INFO     | [payload] control thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:33,018 | INFO     | [job] control thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:33,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 06:01:34] 2026-03-13 05:00:33,188 | INFO     | [payload] failed_post thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:33,196 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:33,312 | INFO     | [job] queue monitor thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:37,163 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 06:01:34] 2026-03-13 05:00:59,794 | INFO     | PID=6609 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 06:01:34] 2026-03-13 05:00:59,794 | INFO     | .. there are 9 such processes running
[2026-03-13 06:01:34] 2026-03-13 05:00:59,794 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 06:01:34] 2026-03-13 05:00:59,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 06:01:34] 2026-03-13 05:00:59,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 06:01:34] 2026-03-13 05:01:22,659 | INFO     | [monitor] cgroup control has ended
[2026-03-13 06:01:34] 2026-03-13 05:01:24,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140582227986240)>', '<ExcThread(monitor, started 140581628000000)>']
[2026-03-13 06:01:34] 2026-03-13 05:01:24,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 06:01:34] 2026-03-13 05:01:24,945 | INFO     | [monitor] control thread has ended
[2026-03-13 06:01:34] 2026-03-13 05:01:29,523 | INFO     | all workflow threads have been joined
[2026-03-13 06:01:34] 2026-03-13 05:01:29,524 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 06:01:34] 2026-03-13 05:01:29,524 | INFO     | traces error code: 0
[2026-03-13 06:01:34] 2026-03-13 05:01:29,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 06:01:34] 2026-03-13 05:01:29,852 [wrapper] ==== pilot stdout END ====
[2026-03-13 06:01:34] 2026-03-13 05:01:29,961 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 06:01:34] 2026-03-13 05:01:30,061 [wrapper] pilotpid: 6609
[2026-03-13 06:01:34] 2026-03-13 05:01:30,140 [wrapper] Pilot exit status: 0
[2026-03-13 06:01:34] 2026-03-13 05:01:30,590 [wrapper] pandaids: 7051529142
[2026-03-13 06:01:34] 2026-03-13 05:01:31,559 [wrapper] cleanup supervisor_pilot 19746 6610
[2026-03-13 06:01:34] 2026-03-13 05:01:31,583 [wrapper] Test setup, not cleaning
[2026-03-13 06:01:34] 2026-03-13 05:01:31,597 [wrapper] apfmon messages muted
[2026-03-13 06:01:34] 2026-03-13 05:01:31,665 [wrapper] ==== wrapper stdout END ====
[2026-03-13 06:01:34] 2026-03-13 05:01:31,687 [wrapper] ==== wrapper stderr END ====
[2026-03-13 06:01:34]  *** Error codes and diagnostics ***
[2026-03-13 06:01:34]     "exeErrorCode": 0,
[2026-03-13 06:01:34]     "exeErrorDiag": "",
[2026-03-13 06:01:34]     "pilotErrorCode": 0,
[2026-03-13 06:01:34]     "pilotErrorDiag": "",
[2026-03-13 06:01:34]  *** Listing of results directory ***
[2026-03-13 06:01:34] total 417048
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc    585013 Mar 12 10:16 pilot3.tar.gz
[2026-03-13 06:01:34] -rwx------. 1 boinc boinc     36322 Mar 12 10:16 runpilot2-wrapper.sh
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc      5111 Mar 12 10:16 queuedata.json
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc       100 Mar 13 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 06:01:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 01:06 run_atlas
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc       105 Mar 13 01:06 job.xml
[2026-03-13 06:01:34] -rw-r--r--. 2 boinc boinc 213969391 Mar 13 01:06 EVNT.48967083._000013.pool.root.1
[2026-03-13 06:01:34] -rw-r--r--. 2 boinc boinc     15845 Mar 13 01:06 start_atlas.sh
[2026-03-13 06:01:34] drwxrwx--x. 2 boinc boinc        68 Mar 13 01:06 shared
[2026-03-13 06:01:34] -rw-r--r--. 2 boinc boinc    597512 Mar 13 01:06 input.tar.gz
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc      6392 Mar 13 01:06 init_data.xml
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc         0 Mar 13 01:06 boinc_lockfile
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc      2555 Mar 13 01:07 pandaJob.out
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc       415 Mar 13 01:12 workernode_map.json
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc   1006506 Mar 13 01:12 agis_schedconf.cvmfs.json
[2026-03-13 06:01:34] drwx------. 5 boinc boinc      4096 Mar 13 01:12 pilot3
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc 203400973 Mar 13 05:59 HITS.48967085._015099.pool.root.1
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc       531 Mar 13 05:59 boinc_task_state.xml
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc        95 Mar 13 06:00 pilot_heartbeat.json
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc      1013 Mar 13 06:00 memory_monitor_summary.json
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc   1511578 Mar 13 06:00 agis_ddmendpoints.agis.ALL.json
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc    486399 Mar 13 06:00 log.48967085._015099.job.log.tgz.1
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc      6314 Mar 13 06:00 heartbeat.json
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc      4880 Mar 13 06:01 pilotlog.txt
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc   2399134 Mar 13 06:01 log.48967085._015099.job.log.1
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc      8192 Mar 13 06:01 boinc_mmap_file
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc        28 Mar 13 06:01 wrapper_checkpoint.txt
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc       357 Mar 13 06:01 output.list
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc       620 Mar 13 06:01 runtime_log
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc   2897920 Mar 13 06:01 result.tar.gz
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc      8832 Mar 13 06:01 runtime_log.err
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc       656 Mar 13 06:01 FHxNDmkKrK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmchjLDmnCkQUn.diag
[2026-03-13 06:01:34] -rw-r--r--. 1 boinc boinc     20931 Mar 13 06:01 stderr.txt
[2026-03-13 06:01:34] HITS file was successfully produced:
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc 203400973 Mar 13 05:59 shared/HITS.pool.root.1
[2026-03-13 06:01:34]  *** Contents of shared directory: ***
[2026-03-13 06:01:34] total 411024
[2026-03-13 06:01:34] -rw-r--r--. 2 boinc boinc 213969391 Mar 13 01:06 ATLAS.root_0
[2026-03-13 06:01:34] -rw-r--r--. 2 boinc boinc     15845 Mar 13 01:06 start_atlas.sh
[2026-03-13 06:01:34] -rw-r--r--. 2 boinc boinc    597512 Mar 13 01:06 input.tar.gz
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc 203400973 Mar 13 05:59 HITS.pool.root.1
[2026-03-13 06:01:34] -rw-------. 1 boinc boinc   2897920 Mar 13 06:01 result.tar.gz
06:01:35 (2469): run_atlas exited; CPU time 67514.464013
06:01:35 (2469): called boinc_finish(0)

</stderr_txt>
]]>

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