Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:32 (690601): wrapper (7.7.26015): starting
07:48:32 (690601): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 07:48:32] Arguments: --nthreads 12
[2026-03-12 07:48:32] Threads: 12
[2026-03-12 07:48:32] Checking for CVMFS
[2026-03-12 07:48:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 07:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 07:48:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 07:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 07:48:33] 2.11.5.0 1748072 145987 222848 157203 0 446 37212591 45568001 27037 130560 0 1323400642 99.829 683419790 21628 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-12 07:48:33] CVMFS is ok
[2026-03-12 07:48:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 07:48:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 07:48:33] Further information can be found at the LHC@home message board.
[2026-03-12 07:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 07:48:33] Checking for apptainer binary...
[2026-03-12 07:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 07:48:33] Running /usr/bin/apptainer --version
[2026-03-12 07:48:33] apptainer version 1.4.1-1.el9
[2026-03-12 07:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 07:48:33] wns0025.triumf.lcg
[2026-03-12 07:48:33] apptainer works
[2026-03-12 07:48:33] Set ATHENA_PROC_NUMBER=12
[2026-03-12 07:48:33] Set ATHENA_CORE_NUMBER=12
[2026-03-12 07:48:33] Starting ATLAS job with PandaID=7038874322
[2026-03-12 07:48:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 07:53:09]  *** The last 200 lines of the pilot log: ***
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | WARNING  | wrong length of table data, x=[1773326978.0], y=[6561.0] (must be same and length>=4)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | could have reported an average CPU frequency of 2730 MHz (4 samples)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | ..............................
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . Timing measurements:
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . get job = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . initial setup = 14 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . payload setup = 12 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . stage-in = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . payload execution = 30 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . stage-out = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . log creation = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | ..............................
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038874322/pilotlog.txt
[2026-03-12 07:53:09] 2026-03-12 14:52:02,345 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 07:53:09] - Log from pilotlog.txt -
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | found no stored workdir sizes
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | WARNING  | wrong length of table data, x=[1773326978.0], y=[6561.0] (must be same and length>=4)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | could have reported an average CPU frequency of 2730 MHz (4 samples)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | ..............................
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . Timing measurements:
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . get job = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . initial setup = 14 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . payload setup = 12 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . stage-in = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . payload execution = 30 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . stage-out = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . log creation = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | ..............................
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038874322/pilotlog.txt
[2026-03-12 07:53:09] 2026-03-12 14:52:02,345 | WARNING  | 
[2026-03-12 07:53:09] [begin log extracts]
[2026-03-12 07:53:09] - Log from pilotlog.txt -
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | WARNING  | found no stored workdir sizes
[2026-03-12 07:53:09] 2026-03-12 14:52:02,311 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | WARNING  | wrong length of table data, x=[1773326978.0], y=[6561.0] (must be same and length>=4)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | could have reported an average CPU frequency of 2730 MHz (4 samples)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | ..............................
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . Timing measurements:
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . get job = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . initial setup = 14 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . payload setup = 12 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . stage-in = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . payload execution = 30 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . stage-out = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | . log creation = 0 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | ..............................
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 07:53:09] 2026-03-12 14:52:02,312 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038874322/pilotlog.txt
[2026-03-12 07:53:09] [end log extracts]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,345 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,375 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 07:53:09] 2026-03-12 14:52:02,644 | INFO     | 
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | job summary report
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | --------------------------------------------------
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | PanDA job id: 7038874322
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | task id: 48700890
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 07:49:52,400 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | pilot state: failed 
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | transexitcode: 65
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | exeerrorcode: 65
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | exitcode: 65
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | cpuconsumptiontime: 13 s
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | nevents: 0
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | neventsw: 0
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | pid: 706615
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | pgrp: 706615
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | corecount: 12
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | event service: False
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | sizes: {0: 2279625, 1: 2280142, 12: 2280142, 46: 2303399, 47: 2307691, 49: 2307747, 167: 2308041}
[2026-03-12 07:53:09] 2026-03-12 14:52:02,645 | INFO     | --------------------------------------------------
[2026-03-12 07:53:09] 2026-03-12 14:52:02,646 | INFO     | 
[2026-03-12 07:53:09] 2026-03-12 14:52:02,646 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | job 7038874322 has completed (purged errors)
[2026-03-12 07:53:09] 2026-03-12 14:52:02,769 | INFO     | overall cleanup function is called
[2026-03-12 07:53:09] 2026-03-12 14:52:03,282 | INFO     | PID=695754 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 07:53:09] 2026-03-12 14:52:03,282 | INFO     | .. there are 41 such processes running
[2026-03-12 07:53:09] 2026-03-12 14:52:03,774 | INFO     | --- collectZombieJob: --- 10, [706615]
[2026-03-12 07:53:09] 2026-03-12 14:52:03,775 | INFO     | zombie collector waiting for pid 706615
[2026-03-12 07:53:09] 2026-03-12 14:52:03,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 07:53:09] 2026-03-12 14:52:03,775 | INFO     | collected zombie processes
[2026-03-12 07:53:09] 2026-03-12 14:52:03,775 | INFO     | will attempt to kill all subprocesses of pid=706615
[2026-03-12 07:53:09] 2026-03-12 14:52:04,045 | INFO     | process IDs to be killed: [706615] (in reverse order)
[2026-03-12 07:53:09] 2026-03-12 14:52:04,232 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 07:53:09] 2026-03-12 14:52:04,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 07:53:09] 2026-03-12 14:52:04,264 | INFO     | did not find any defunct processes belonging to 706615
[2026-03-12 07:53:09] 2026-03-12 14:52:04,325 | INFO     | did not find any defunct processes belonging to 706615
[2026-03-12 07:53:09] 2026-03-12 14:52:04,325 | INFO     | ready for new job
[2026-03-12 07:53:09] 2026-03-12 14:52:04,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 07:53:09] 2026-03-12 14:52:04,326 | INFO     | **************************************
[2026-03-12 07:53:09] 2026-03-12 14:52:04,326 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 07:53:09] 2026-03-12 14:52:04,326 | INFO     | **************************************
[2026-03-12 07:53:09] 2026-03-12 14:52:04,326 | INFO     | 
[2026-03-12 07:53:09] 2026-03-12 14:52:04,344 | INFO     | architecture information:
[2026-03-12 07:53:09] 2026-03-12 14:52:04,367 | INFO     | executing command: cat /etc/os-release
[2026-03-12 07:53:09] 2026-03-12 14:52:04,415 | INFO     | cat /etc/os-release:
[2026-03-12 07:53:09] NAME="CentOS Linux"
[2026-03-12 07:53:09] VERSION="7 (Core)"
[2026-03-12 07:53:09] ID="centos"
[2026-03-12 07:53:09] ID_LIKE="rhel fedora"
[2026-03-12 07:53:09] VERSION_ID="7"
[2026-03-12 07:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 07:53:09] ANSI_COLOR="0;31"
[2026-03-12 07:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 07:53:09] HOME_URL="https://www.centos.org/"
[2026-03-12 07:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 07:53:09] 
[2026-03-12 07:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 07:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 07:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 07:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 07:53:09] 
[2026-03-12 07:53:09] 2026-03-12 14:52:04,415 | INFO     | **************************************
[2026-03-12 07:53:09] 2026-03-12 14:52:04,919 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 07:53:09] 2026-03-12 14:52:04,958 | INFO     | sufficient remaining disk space (1996778110976 B)
[2026-03-12 07:53:09] 2026-03-12 14:52:04,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 07:53:09] 2026-03-12 14:52:04,958 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 07:53:09] 2026-03-12 14:52:04,958 | INFO     | update_server=False
[2026-03-12 07:53:09] 2026-03-12 14:52:04,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 07:53:09] 2026-03-12 14:52:05,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:53:09] 2026-03-12 14:52:05,274 | INFO     | aborting loop
[2026-03-12 07:53:09] 2026-03-12 14:52:05,551 | INFO     | all data control threads have been joined
[2026-03-12 07:53:09] 2026-03-12 14:52:05,575 | INFO     | all payload control threads have been joined
[2026-03-12 07:53:09] 2026-03-12 14:52:05,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 07:53:09] 2026-03-12 14:52:05,842 | INFO     | all job control threads have been joined
[2026-03-12 07:53:09] 2026-03-12 14:52:05,964 | INFO     | [job] retrieve thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,215 | INFO     | [payload] failed_post thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,279 | INFO     | [job] job monitor thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,557 | INFO     | [data] control thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,583 | INFO     | [payload] control thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,787 | INFO     | [job] validate thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,848 | INFO     | [job] control thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:06,856 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:07,020 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:07,090 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:07,143 | INFO     | [data] copytool_in thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:07,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 07:53:09] 2026-03-12 14:52:07,258 | INFO     | [payload] validate_post thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:07,359 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:07,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:53:09] 2026-03-12 14:52:07,658 | INFO     | [data] copytool_out thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:08,526 | INFO     | [job] queue monitor thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:11,228 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 07:53:09] 2026-03-12 14:52:35,772 | INFO     | PID=695754 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 07:53:09] 2026-03-12 14:52:35,772 | INFO     | .. there are 41 such processes running
[2026-03-12 07:53:09] 2026-03-12 14:52:35,773 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 07:53:09] 2026-03-12 14:52:35,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 07:53:09] 2026-03-12 14:52:35,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 07:53:09] 2026-03-12 14:53:02,890 | INFO     | [monitor] cgroup control has ended
[2026-03-12 07:53:09] 2026-03-12 14:53:03,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571707864896)>', '<ExcThread(monitor, started 140571159017216)>']
[2026-03-12 07:53:09] 2026-03-12 14:53:03,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 07:53:09] 2026-03-12 14:53:03,956 | INFO     | [monitor] control thread has ended
[2026-03-12 07:53:09] 2026-03-12 14:53:08,419 | INFO     | all workflow threads have been joined
[2026-03-12 07:53:09] 2026-03-12 14:53:08,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 07:53:09] 2026-03-12 14:53:08,420 | INFO     | traces error code: 0
[2026-03-12 07:53:09] 2026-03-12 14:53:08,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 07:53:09] 2026-03-12 14:53:08,646 [wrapper] ==== pilot stdout END ====
[2026-03-12 07:53:09] 2026-03-12 14:53:08,674 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 07:53:09] 2026-03-12 14:53:08,682 [wrapper] pilotpid: 695754
[2026-03-12 07:53:09] 2026-03-12 14:53:08,684 [wrapper] Pilot exit status: 0
[2026-03-12 07:53:09] 2026-03-12 14:53:08,745 [wrapper] pandaids: 7038874322
[2026-03-12 07:53:09] 2026-03-12 14:53:08,840 [wrapper] cleanup supervisor_pilot  695766 695755
[2026-03-12 07:53:09] 2026-03-12 14:53:08,841 [wrapper] Test setup, not cleaning
[2026-03-12 07:53:09] 2026-03-12 14:53:08,843 [wrapper] apfmon messages muted
[2026-03-12 07:53:09] 2026-03-12 14:53:08,845 [wrapper] ==== wrapper stdout END ====
[2026-03-12 07:53:09] 2026-03-12 14:53:08,847 [wrapper] ==== wrapper stderr END ====
[2026-03-12 07:53:09]  *** Error codes and diagnostics ***
[2026-03-12 07:53:09]     "exeErrorCode": 65,
[2026-03-12 07:53:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 07:53:09]     "pilotErrorCode": 1305,
[2026-03-12 07:53:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 07:53:09]  *** Listing of results directory ***
[2026-03-12 07:53:09] total 188508
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc    584627 Mar  4 02:35 pilot3.tar.gz
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc      5111 Mar  4 02:36 queuedata.json
[2026-03-12 07:53:09] -rwx------. 1 boinc boinc     36322 Mar  4 02:37 runpilot2-wrapper.sh
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc       100 Mar 12 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 07:53:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 07:48 run_atlas
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc       105 Mar 12 07:48 job.xml
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc      6593 Mar 12 07:48 init_data.xml
[2026-03-12 07:53:09] -rw-r--r--. 2 boinc boinc 188888994 Mar 12 07:48 EVNT.48700888._000131.pool.root.1
[2026-03-12 07:53:09] -rw-r--r--. 2 boinc boinc     15845 Mar 12 07:48 start_atlas.sh
[2026-03-12 07:53:09] drwxrwx--x. 2 boinc boinc      4096 Mar 12 07:48 shared
[2026-03-12 07:53:09] -rw-r--r--. 2 boinc boinc    597931 Mar 12 07:48 input.tar.gz
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc         0 Mar 12 07:48 boinc_lockfile
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc      2512 Mar 12 07:48 pandaJob.out
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc   1006554 Mar 12 07:48 agis_schedconf.cvmfs.json
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc   1511578 Mar 12 07:48 agis_ddmendpoints.agis.ALL.json
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc       445 Mar 12 07:49 workernode_map.json
[2026-03-12 07:53:09] drwx------. 5 boinc boinc      4096 Mar 12 07:49 pilot3
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc       975 Mar 12 07:49 memory_monitor_summary.json
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc     21048 Mar 12 07:50 log.48700890._003235.job.log.tgz.1
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc        95 Mar 12 07:51 pilot_heartbeat.json
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc      7011 Mar 12 07:52 heartbeat.json
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc       523 Mar 12 07:52 boinc_task_state.xml
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc        22 Mar 12 07:53 wrapper_checkpoint.txt
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc      8192 Mar 12 07:53 boinc_mmap_file
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc      4818 Mar 12 07:53 pilotlog.txt
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc     82571 Mar 12 07:53 log.48700890._003235.job.log.1
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc       188 Mar 12 07:53 output.list
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc       620 Mar 12 07:53 runtime_log
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc    122880 Mar 12 07:53 result.tar.gz
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc      8635 Mar 12 07:53 runtime_log.err
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc       643 Mar 12 07:53 2CWNDmQmyH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm78JLDmunIFLm.diag
[2026-03-12 07:53:09] -rw-r--r--. 1 boinc boinc     21760 Mar 12 07:53 stderr.txt
[2026-03-12 07:53:09] No HITS result produced
[2026-03-12 07:53:09]  *** Contents of shared directory: ***
[2026-03-12 07:53:09] total 185188
[2026-03-12 07:53:09] -rw-r--r--. 2 boinc boinc 188888994 Mar 12 07:48 ATLAS.root_0
[2026-03-12 07:53:09] -rw-r--r--. 2 boinc boinc     15845 Mar 12 07:48 start_atlas.sh
[2026-03-12 07:53:09] -rw-r--r--. 2 boinc boinc    597931 Mar 12 07:48 input.tar.gz
[2026-03-12 07:53:09] -rw-------. 1 boinc boinc    122880 Mar 12 07:53 result.tar.gz
07:53:10 (690601): run_atlas exited; CPU time 19.098073
07:53:10 (690601): called boinc_finish(0)

</stderr_txt>
]]>

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