Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:45:58 (329873): wrapper (7.7.26015): starting
10:45:58 (329873): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 10:45:58] Arguments: --nthreads 8
[2026-03-12 10:45:58] Threads: 8
[2026-03-12 10:45:58] Checking for CVMFS
[2026-03-12 10:45:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 10:45:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 10:45:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 10:45:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 10:45:59] 2.13.3.0 1911145 11607 219584 157203 0 223 32904856 40960000 22347 16776704 1 38837483 99.696 26516478 16459 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 10:45:59] CVMFS is ok
[2026-03-12 10:45:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 10:45:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 10:45:59] Further information can be found at the LHC@home message board.
[2026-03-12 10:45:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 10:45:59] Checking for apptainer binary...
[2026-03-12 10:45:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 10:45:59] Running /usr/bin/apptainer --version
[2026-03-12 10:45:59] apptainer version 1.4.5-2.el9
[2026-03-12 10:45:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 10:45:59] c7-11-12.aglt2.org
[2026-03-12 10:45:59] apptainer works
[2026-03-12 10:45:59] Set ATHENA_PROC_NUMBER=8
[2026-03-12 10:45:59] Set ATHENA_CORE_NUMBER=8
[2026-03-12 10:45:59] Starting ATLAS job with PandaID=7038629655
[2026-03-12 10:45:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 16:12:11]  *** The last 200 lines of the pilot log: ***
[2026-03-12 16:12:11] 2026-03-12 20:11:28,687 | INFO     | log transfer has been attempted: DONE
[2026-03-12 16:12:11] 2026-03-12 20:11:28,687 | INFO     | job 7038629655 has finished - writing final server update
[2026-03-12 16:12:11] 2026-03-12 20:11:28,687 | INFO     | total number of processed events: 400 (read)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,763 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7038629655/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,768 | INFO     | extracted standard info from prmon json
[2026-03-12 16:12:11] 2026-03-12 20:11:28,768 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 16:12:11] 2026-03-12 20:11:28,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 16:12:11] 2026-03-12 20:11:28,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 16:12:11] 2026-03-12 20:11:28,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 16:12:11] 2026-03-12 20:11:28,773 | INFO     | fitting pss+swap vs Time
[2026-03-12 16:12:11] 2026-03-12 20:11:28,773 | INFO     | sum of square deviations: 10065762382.777433
[2026-03-12 16:12:11] 2026-03-12 20:11:28,781 | INFO     | sum of deviations: -21701129800.360504
[2026-03-12 16:12:11] 2026-03-12 20:11:28,781 | INFO     | mean x: 1773336522.3322885
[2026-03-12 16:12:11] 2026-03-12 20:11:28,782 | INFO     | mean y: 2468379.918495298
[2026-03-12 16:12:11] 2026-03-12 20:11:28,782 | INFO     | intersect: 3825666721.7249913
[2026-03-12 16:12:11] 2026-03-12 20:11:28,782 | INFO     | chi2: 3.7901902902748157
[2026-03-12 16:12:11] 2026-03-12 20:11:28,782 | INFO     | sum of square deviations: 9599802624.71336
[2026-03-12 16:12:11] 2026-03-12 20:11:28,785 | INFO     | sum of deviations: 21436708524.012756
[2026-03-12 16:12:11] 2026-03-12 20:11:28,785 | INFO     | mean x: 1773336369.8280256
[2026-03-12 16:12:11] 2026-03-12 20:11:28,785 | INFO     | mean y: 2482365.407643312
[2026-03-12 16:12:11] 2026-03-12 20:11:28,785 | INFO     | intersect: -3957442266.4979367
[2026-03-12 16:12:11] 2026-03-12 20:11:28,785 | INFO     | chi2: 2.1637237207641244
[2026-03-12 16:12:11] 2026-03-12 20:11:28,785 | INFO     | current chi2=2.1637237207641244 (change=42.912530636892136 %)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,790 | INFO     | sum of square deviations: 9148446815.637468
[2026-03-12 16:12:11] 2026-03-12 20:11:28,794 | INFO     | sum of deviations: 20938278695.618137
[2026-03-12 16:12:11] 2026-03-12 20:11:28,794 | INFO     | mean x: 1773336217.3236246
[2026-03-12 16:12:11] 2026-03-12 20:11:28,794 | INFO     | mean y: 2482196.9838187704
[2026-03-12 16:12:11] 2026-03-12 20:11:28,794 | INFO     | intersect: -4056196690.0036254
[2026-03-12 16:12:11] 2026-03-12 20:11:28,794 | INFO     | chi2: 2.1642209303363074
[2026-03-12 16:12:11] 2026-03-12 20:11:28,794 | INFO     | current chi2=2.1642209303363074 (change=-0.022979346550183393 %)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,815 | INFO     | right removable region: 308
[2026-03-12 16:12:11] 2026-03-12 20:11:28,815 | INFO     | sum of square deviations: 9599815193.388477
[2026-03-12 16:12:11] 2026-03-12 20:11:28,817 | INFO     | sum of deviations: -80670173373.66878
[2026-03-12 16:12:11] 2026-03-12 20:11:28,817 | INFO     | mean x: 1773336674.834395
[2026-03-12 16:12:11] 2026-03-12 20:11:28,817 | INFO     | mean y: 2487561.506369427
[2026-03-12 16:12:11] 2026-03-12 20:11:28,818 | INFO     | intersect: 14904376204.873182
[2026-03-12 16:12:11] 2026-03-12 20:11:28,818 | INFO     | chi2: 1.93645102831185
[2026-03-12 16:12:11] 2026-03-12 20:11:28,818 | INFO     | current chi2=1.93645102831185 (change=48.90887053136734 %)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,818 | INFO     | sum of square deviations: 9148453775.320341
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | sum of deviations: -73409369311.41748
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | mean x: 1773336827.3398058
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | mean y: 2485091.708737864
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | intersect: 14232161632.558598
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | chi2: 1.918834154606645
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | current chi2=1.918834154606645 (change=0.9097505409451475 %)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,841 | INFO     | left removable region: 20
[2026-03-12 16:12:11] 2026-03-12 20:11:28,842 | INFO     | sum of square deviations: 7407150139.2465515
[2026-03-12 16:12:11] 2026-03-12 20:11:28,863 | INFO     | sum of deviations: 1150951460.8680553
[2026-03-12 16:12:11] 2026-03-12 20:11:28,863 | INFO     | mean x: 1773336796.8159723
[2026-03-12 16:12:11] 2026-03-12 20:11:28,863 | INFO     | mean y: 2487880.5069444445
[2026-03-12 16:12:11] 2026-03-12 20:11:28,863 | INFO     | intersect: -273060007.4847026
[2026-03-12 16:12:11] 2026-03-12 20:11:28,863 | INFO     | chi2: 0.07570857993977323
[2026-03-12 16:12:11] 2026-03-12 20:11:28,864 | INFO     | current memory leak: 0.16 B/s (using 288 data points, chi2=0.08)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,864 | INFO     | could have reported an average CPU frequency of 3292 MHz (14 samples)
[2026-03-12 16:12:11] 2026-03-12 20:11:28,864 | INFO     | ..............................
[2026-03-12 16:12:11] 2026-03-12 20:11:28,864 | INFO     | . Timing measurements:
[2026-03-12 16:12:11] 2026-03-12 20:11:28,864 | INFO     | . get job = 0 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,864 | INFO     | . initial setup = 12 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,865 | INFO     | . payload setup = 13 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,865 | INFO     | . stage-in = 0 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,865 | INFO     | . payload execution = 19456 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,865 | INFO     | . stage-out = 8 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,865 | INFO     | . log creation = 0 s
[2026-03-12 16:12:11] 2026-03-12 20:11:28,865 | INFO     | ..............................
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | 
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | job summary report
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | --------------------------------------------------
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | PanDA job id: 7038629655
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | task id: 48700938
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | errors: (none)
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | pilot state: finished 
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | transexitcode: 0
[2026-03-12 16:12:11] 2026-03-12 20:11:29,551 | INFO     | exeerrorcode: 0
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | exeerrordiag: 
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | exitcode: 0
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | exitmsg: OK
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | cpuconsumptiontime: 26705 s
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | nevents: 400
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | neventsw: 0
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | pid: 348920
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | pgrp: 348920
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | corecount: 8
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | event service: False
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | sizes: {0: 2279722, 1: 2280183, 11: 2280183, 19477: 2313266, 19478: 2313265, 19487: 2322319, 19488: 2322503, 19491: 2322697}
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | --------------------------------------------------
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | 
[2026-03-12 16:12:11] 2026-03-12 20:11:29,552 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 16:12:11] 2026-03-12 20:11:29,872 | INFO     | time since job start (19502s) is within the limit (349056.0s)
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | job 7038629655 has completed (purged errors)
[2026-03-12 16:12:11] 2026-03-12 20:11:30,311 | INFO     | overall cleanup function is called
[2026-03-12 16:12:11] 2026-03-12 20:11:31,366 | INFO     | --- collectZombieJob: --- 10, [348920]
[2026-03-12 16:12:11] 2026-03-12 20:11:31,366 | INFO     | zombie collector waiting for pid 348920
[2026-03-12 16:12:11] 2026-03-12 20:11:31,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 16:12:11] 2026-03-12 20:11:31,366 | INFO     | collected zombie processes
[2026-03-12 16:12:11] 2026-03-12 20:11:31,366 | INFO     | will attempt to kill all subprocesses of pid=348920
[2026-03-12 16:12:11] 2026-03-12 20:11:34,125 | INFO     | process IDs to be killed: [348920] (in reverse order)
[2026-03-12 16:12:11] 2026-03-12 20:11:34,660 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 16:12:11] 2026-03-12 20:11:34,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 16:12:11] 2026-03-12 20:11:34,680 | INFO     | did not find any defunct processes belonging to 348920
[2026-03-12 16:12:11] 2026-03-12 20:11:34,721 | INFO     | did not find any defunct processes belonging to 348920
[2026-03-12 16:12:11] 2026-03-12 20:11:34,722 | INFO     | ready for new job
[2026-03-12 16:12:11] 2026-03-12 20:11:34,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 16:12:11] 2026-03-12 20:11:34,724 | INFO     | **************************************
[2026-03-12 16:12:11] 2026-03-12 20:11:34,724 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 16:12:11] 2026-03-12 20:11:34,724 | INFO     | **************************************
[2026-03-12 16:12:11] 2026-03-12 20:11:34,724 | INFO     | 
[2026-03-12 16:12:11] 2026-03-12 20:11:34,758 | INFO     | architecture information:
[2026-03-12 16:12:11] 2026-03-12 20:11:34,801 | INFO     | executing command: cat /etc/os-release
[2026-03-12 16:12:11] 2026-03-12 20:11:35,394 | INFO     | cat /etc/os-release:
[2026-03-12 16:12:11] NAME="CentOS Linux"
[2026-03-12 16:12:11] VERSION="7 (Core)"
[2026-03-12 16:12:11] ID="centos"
[2026-03-12 16:12:11] ID_LIKE="rhel fedora"
[2026-03-12 16:12:11] VERSION_ID="7"
[2026-03-12 16:12:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 16:12:11] ANSI_COLOR="0;31"
[2026-03-12 16:12:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 16:12:11] HOME_URL="https://www.centos.org/"
[2026-03-12 16:12:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 16:12:11] 
[2026-03-12 16:12:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 16:12:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 16:12:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 16:12:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 16:12:11] 
[2026-03-12 16:12:11] 2026-03-12 20:11:35,394 | INFO     | **************************************
[2026-03-12 16:12:11] 2026-03-12 20:11:35,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 16:12:11] 2026-03-12 20:11:36,051 | INFO     | sufficient remaining disk space (85308997632 B)
[2026-03-12 16:12:11] 2026-03-12 20:11:36,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 16:12:11] 2026-03-12 20:11:36,071 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 16:12:11] 2026-03-12 20:11:36,071 | INFO     | update_server=False
[2026-03-12 16:12:11] 2026-03-12 20:11:36,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 16:12:11] 2026-03-12 20:11:36,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:12:11] 2026-03-12 20:11:36,071 | INFO     | aborting loop
[2026-03-12 16:12:11] 2026-03-12 20:11:36,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 16:12:11] 2026-03-12 20:11:36,591 | INFO     | all data control threads have been joined
[2026-03-12 16:12:11] 2026-03-12 20:11:36,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 16:12:11] 2026-03-12 20:11:36,984 | INFO     | all job control threads have been joined
[2026-03-12 16:12:11] 2026-03-12 20:11:37,081 | INFO     | [job] retrieve thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,082 | INFO     | [job] job monitor thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,103 | INFO     | all payload control threads have been joined
[2026-03-12 16:12:11] 2026-03-12 20:11:37,331 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,346 | INFO     | [data] copytool_in thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,601 | INFO     | [data] control thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,608 | INFO     | [job] validate thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,680 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,909 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:37,990 | INFO     | [job] control thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:38,088 | INFO     | [data] copytool_out thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:38,109 | INFO     | [payload] control thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:38,180 | INFO     | [payload] validate_post thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:38,279 | INFO     | [payload] failed_post thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:38,310 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:38,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:12:11] 2026-03-12 20:11:39,608 | INFO     | [job] queue monitor thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:11:40,903 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 16:12:11] 2026-03-12 20:12:02,228 | INFO     | [monitor] cgroup control has ended
[2026-03-12 16:12:11] 2026-03-12 20:12:03,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886361106240)>', '<ExcThread(monitor, started 139885742651136)>']
[2026-03-12 16:12:11] 2026-03-12 20:12:08,635 | INFO     | PID=335448 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 16:12:11] 2026-03-12 20:12:08,635 | INFO     | .. there are 32 such processes running
[2026-03-12 16:12:11] 2026-03-12 20:12:08,635 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 16:12:11] 2026-03-12 20:12:08,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 16:12:11] 2026-03-12 20:12:08,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 16:12:11] 2026-03-12 20:12:08,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 16:12:11] 2026-03-12 20:12:08,636 | INFO     | [monitor] control thread has ended
[2026-03-12 16:12:11] 2026-03-12 20:12:09,022 | INFO     | all workflow threads have been joined
[2026-03-12 16:12:11] 2026-03-12 20:12:09,056 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 16:12:11] 2026-03-12 20:12:09,056 | INFO     | traces error code: 0
[2026-03-12 16:12:11] 2026-03-12 20:12:09,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 16:12:11] 2026-03-12 20:12:09,589 [wrapper] ==== pilot stdout END ====
[2026-03-12 16:12:11] 2026-03-12 20:12:09,637 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 16:12:11] 2026-03-12 20:12:09,678 [wrapper] pilotpid: 335448
[2026-03-12 16:12:11] 2026-03-12 20:12:09,698 [wrapper] Pilot exit status: 0
[2026-03-12 16:12:11] 2026-03-12 20:12:09,849 [wrapper] pandaids: 7038629655
[2026-03-12 16:12:11] 2026-03-12 20:12:10,916 [wrapper] cleanup supervisor_pilot 1187048 335449
[2026-03-12 16:12:11] 2026-03-12 20:12:10,939 [wrapper] Test setup, not cleaning
[2026-03-12 16:12:11] 2026-03-12 20:12:10,960 [wrapper] apfmon messages muted
[2026-03-12 16:12:11] 2026-03-12 20:12:10,974 [wrapper] ==== wrapper stdout END ====
[2026-03-12 16:12:11] 2026-03-12 20:12:10,997 [wrapper] ==== wrapper stderr END ====
[2026-03-12 16:12:11]  *** Error codes and diagnostics ***
[2026-03-12 16:12:11]     "exeErrorCode": 0,
[2026-03-12 16:12:11]     "exeErrorDiag": "",
[2026-03-12 16:12:11]     "pilotErrorCode": 0,
[2026-03-12 16:12:11]     "pilotErrorDiag": "",
[2026-03-12 16:12:11]  *** Listing of results directory ***
[2026-03-12 16:12:11] total 343560
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 04:32 pilot3.tar.gz
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 04:32 queuedata.json
[2026-03-12 16:12:11] -rwx------. 1 boincer umatlas     36322 Mar  4 04:32 runpilot2-wrapper.sh
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas       100 Mar 12 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 16:12:11] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 10:45 run_atlas
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas       105 Mar 12 10:45 job.xml
[2026-03-12 16:12:11] -rw-r--r--. 2 boincer umatlas 191351713 Mar 12 10:45 EVNT.48700936._000125.pool.root.1
[2026-03-12 16:12:11] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 10:45 start_atlas.sh
[2026-03-12 16:12:11] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 10:45 shared
[2026-03-12 16:12:11] -rw-r--r--. 2 boincer umatlas    597929 Mar 12 10:45 input.tar.gz
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas         0 Mar 12 10:45 boinc_lockfile
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas      2500 Mar 12 10:45 pandaJob.out
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas        57 Mar 12 10:46 setup.sh.local
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas   1006554 Mar 12 10:46 agis_schedconf.cvmfs.json
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas       430 Mar 12 10:46 workernode_map.json
[2026-03-12 16:12:11] drwx------. 5 boincer umatlas      4096 Mar 12 10:46 pilot3
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas      6901 Mar 12 16:02 init_data.xml
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas 150583960 Mar 12 16:08 HITS.48700938._003224.pool.root.1
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas       530 Mar 12 16:09 boinc_task_state.xml
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas      1031 Mar 12 16:11 memory_monitor_summary.json
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas        95 Mar 12 16:11 pilot_heartbeat.json
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas   1511578 Mar 12 16:11 agis_ddmendpoints.agis.ALL.json
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas    517249 Mar 12 16:11 log.48700938._003224.job.log.tgz.1
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas      6329 Mar 12 16:11 heartbeat.json
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas        28 Mar 12 16:12 wrapper_checkpoint.txt
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 16:12 boinc_mmap_file
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas      4819 Mar 12 16:12 pilotlog.txt
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas   2447354 Mar 12 16:12 log.48700938._003224.job.log.1
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas       357 Mar 12 16:12 output.list
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas       620 Mar 12 16:12 runtime_log
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas   2979840 Mar 12 16:12 result.tar.gz
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas      9342 Mar 12 16:12 runtime_log.err
[2026-03-12 16:12:11] -rw-------. 1 boincer umatlas       655 Mar 12 16:12 5TyLDmMmxH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmr1HLDmdi99mn.diag
[2026-03-12 16:12:11] -rw-r--r--. 1 boincer umatlas     21135 Mar 12 16:12 stderr.txt
[2026-03-12 16:12:12] HITS file was successfully produced:
[2026-03-12 16:12:12] -rw-------. 1 boincer umatlas 150583960 Mar 12 16:08 shared/HITS.pool.root.1
[2026-03-12 16:12:12]  *** Contents of shared directory: ***
[2026-03-12 16:12:12] total 337444
[2026-03-12 16:12:12] -rw-r--r--. 2 boincer umatlas 191351713 Mar 12 10:45 ATLAS.root_0
[2026-03-12 16:12:12] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 10:45 start_atlas.sh
[2026-03-12 16:12:12] -rw-r--r--. 2 boincer umatlas    597929 Mar 12 10:45 input.tar.gz
[2026-03-12 16:12:12] -rw-------. 1 boincer umatlas 150583960 Mar 12 16:08 HITS.pool.root.1
[2026-03-12 16:12:12] -rw-------. 1 boincer umatlas   2979840 Mar 12 16:12 result.tar.gz
16:12:13 (329873): run_atlas exited; CPU time 27312.636840
16:12:13 (329873): called boinc_finish(0)

</stderr_txt>
]]>

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