Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:47:40 (1396052): wrapper (7.7.26015): starting
02:47:40 (1396052): wrapper: running run_atlas (--nthreads 2)
[2026-03-13 02:47:40] Arguments: --nthreads 2
[2026-03-13 02:47:40] Threads: 2
[2026-03-13 02:47:40] Checking for CVMFS
[2026-03-13 02:47:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 02:47:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 02:47:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 02:47:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 02:47:40] 2.9.2.0 1609849 20525 64276 157222 2 50 27901340 36864001 0 130560 0 5383954 99.974 766933 11702 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 02:47:40] CVMFS is ok
[2026-03-13 02:47:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 02:47:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 02:47:40] Further information can be found at the LHC@home message board.
[2026-03-13 02:47:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 02:47:40] Checking for apptainer binary...
[2026-03-13 02:47:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 02:47:40] Running /usr/bin/apptainer --version
[2026-03-13 02:47:40] apptainer version 1.4.1-1.1
[2026-03-13 02:47:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 02:47:41] thA369
[2026-03-13 02:47:41] apptainer works
[2026-03-13 02:47:41] Set ATHENA_PROC_NUMBER=2
[2026-03-13 02:47:41] Set ATHENA_CORE_NUMBER=2
[2026-03-13 02:47:41] Starting ATLAS job with PandaID=7038493539
[2026-03-13 02:47:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 04:46:22]  *** The last 200 lines of the pilot log: ***
[2026-03-13 04:46:22] 2026-03-13 03:46:04,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 04:46:22] 2026-03-13 03:46:04,006 | INFO     | did not find any defunct processes belonging to 1404610
[2026-03-13 04:46:22] 2026-03-13 03:46:04,007 | INFO     | did not find any defunct processes belonging to 1404610
[2026-03-13 04:46:22] 2026-03-13 03:46:04,007 | INFO     | ready for new job
[2026-03-13 04:46:22] 2026-03-13 03:46:04,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 04:46:22] 2026-03-13 03:46:04,008 | INFO     | **************************************
[2026-03-13 04:46:22] 2026-03-13 03:46:04,008 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 04:46:22] 2026-03-13 03:46:04,008 | INFO     | **************************************
[2026-03-13 04:46:22] 2026-03-13 03:46:04,008 | INFO     | 
[2026-03-13 04:46:22] 2026-03-13 03:46:04,008 | INFO     | architecture information:
[2026-03-13 04:46:22] 2026-03-13 03:46:04,008 | INFO     | executing command: cat /etc/os-release
[2026-03-13 04:46:22] 2026-03-13 03:46:04,017 | INFO     | cat /etc/os-release:
[2026-03-13 04:46:22] NAME="CentOS Linux"
[2026-03-13 04:46:22] VERSION="7 (Core)"
[2026-03-13 04:46:22] ID="centos"
[2026-03-13 04:46:22] ID_LIKE="rhel fedora"
[2026-03-13 04:46:22] VERSION_ID="7"
[2026-03-13 04:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 04:46:22] ANSI_COLOR="0;31"
[2026-03-13 04:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 04:46:22] HOME_URL="https://www.centos.org/"
[2026-03-13 04:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 04:46:22] 
[2026-03-13 04:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 04:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 04:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 04:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 04:46:22] 
[2026-03-13 04:46:22] 2026-03-13 03:46:04,017 | INFO     | **************************************
[2026-03-13 04:46:22] 2026-03-13 03:46:04,520 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | INFO     | sufficient remaining disk space (331509399552 B)
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | INFO     | update_server=False
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 04:46:22] 2026-03-13 03:46:04,532 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 04:46:22] 2026-03-13 03:46:04,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 04:46:22] 2026-03-13 03:46:04,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 04:46:22] 2026-03-13 03:46:04,573 | INFO     | all payload control threads have been joined
[2026-03-13 04:46:22] 2026-03-13 03:46:04,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 04:46:22] 2026-03-13 03:46:04,765 | INFO     | aborting loop
[2026-03-13 04:46:22] 2026-03-13 03:46:05,393 | INFO     | all data control threads have been joined
[2026-03-13 04:46:22] 2026-03-13 03:46:05,538 | INFO     | [job] retrieve thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:05,538 | INFO     | [job] queue monitor thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:05,546 | INFO     | all job control threads have been joined
[2026-03-13 04:46:22] 2026-03-13 03:46:05,579 | INFO     | [payload] control thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:05,771 | INFO     | [job] job monitor thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:05,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 04:46:22] 2026-03-13 03:46:05,966 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:05,984 | INFO     | [job] validate thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:05,999 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:06,075 | INFO     | [payload] validate_post thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:06,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 04:46:22] 2026-03-13 03:46:06,269 | INFO     | [data] copytool_in thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:06,399 | INFO     | [data] control thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:06,551 | INFO     | [job] control thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:06,851 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:07,091 | INFO     | [payload] failed_post thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:07,935 | INFO     | [data] copytool_out thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:10,180 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:10,595 | INFO     | [monitor] cgroup control has ended
[2026-03-13 04:46:22] 2026-03-13 03:46:14,921 | INFO     | job.realtimelogging is not enabled
[2026-03-13 04:46:22] 2026-03-13 03:46:15,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 04:46:22] 2026-03-13 03:46:17,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277650179904)>', '<ExcThread(monitor, started 140276626605824)>']
[2026-03-13 04:46:22] 2026-03-13 03:46:17,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 04:46:22] 2026-03-13 03:46:17,597 | INFO     | [monitor] control thread has ended
[2026-03-13 04:46:22] 2026-03-13 03:46:22,068 | INFO     | all workflow threads have been joined
[2026-03-13 04:46:22] 2026-03-13 03:46:22,068 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 04:46:22] 2026-03-13 03:46:22,068 | INFO     | traces error code: 0
[2026-03-13 04:46:22] 2026-03-13 03:46:22,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 04:46:22] 2026-03-13 03:46:22,109 [wrapper] ==== pilot stdout END ====
[2026-03-13 04:46:22] 2026-03-13 03:46:22,112 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 04:46:22] 2026-03-13 03:46:22,115 [wrapper] pilotpid: 1400087
[2026-03-13 04:46:22] 2026-03-13 03:46:22,118 [wrapper] Pilot exit status: 0
[2026-03-13 04:46:22] 2026-03-13 03:46:22,124 [wrapper] pandaids: 7038493539
[2026-03-13 04:46:22] 2026-03-13 03:46:22,140 [wrapper] cleanup supervisor_pilot 1437429 1400088
[2026-03-13 04:46:22] 2026-03-13 03:46:22,142 [wrapper] Test setup, not cleaning
[2026-03-13 04:46:22] 2026-03-13 03:46:22,144 [wrapper] apfmon messages muted
[2026-03-13 04:46:22] 2026-03-13 03:46:22,146 [wrapper] ==== wrapper stdout END ====
[2026-03-13 04:46:22] 2026-03-13 03:46:22,148 [wrapper] ==== wrapper stderr END ====
[2026-03-13 04:46:22]  *** Error codes and diagnostics ***
[2026-03-13 04:46:22]     "exeErrorCode": 0,
[2026-03-13 04:46:22]     "exeErrorDiag": "",
[2026-03-13 04:46:22]     "pilotErrorCode": 0,
[2026-03-13 04:46:22]     "pilotErrorDiag": "",
[2026-03-13 04:46:22]  *** Listing of results directory ***
[2026-03-13 04:46:22] total 609636
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc    584627 Mar  4 09:44 pilot3.tar.gz
[2026-03-13 04:46:22] -rwx------ 1 boinc boinc     36322 Mar  4 09:48 runpilot2-wrapper.sh
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc      5111 Mar  4 09:50 queuedata.json
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc       100 Mar 13 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 04:46:22] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 02:47 run_atlas
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc       105 Mar 13 02:47 job.xml
[2026-03-13 04:46:22] -rw-r--r-- 2 boinc boinc 436922713 Mar 13 02:47 EVNT.46701403._001020.pool.root.1
[2026-03-13 04:46:22] -rw-r--r-- 2 boinc boinc    597942 Mar 13 02:47 input.tar.gz
[2026-03-13 04:46:22] -rw-r--r-- 2 boinc boinc     15845 Mar 13 02:47 start_atlas.sh
[2026-03-13 04:46:22] drwxrwx--x 2 boinc boinc      4096 Mar 13 02:47 shared
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc         0 Mar 13 02:47 boinc_setup_complete
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc      6205 Mar 13 02:47 init_data.xml
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc         0 Mar 13 02:47 boinc_lockfile
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc      2559 Mar 13 02:47 pandaJob.out
[2026-03-13 04:46:22] -rw------- 1 boinc boinc   1006514 Mar 13 02:47 agis_schedconf.cvmfs.json
[2026-03-13 04:46:22] -rw------- 1 boinc boinc   1511578 Mar 13 02:47 agis_ddmendpoints.agis.ALL.json
[2026-03-13 04:46:22] -rw------- 1 boinc boinc       419 Mar 13 02:47 workernode_map.json
[2026-03-13 04:46:22] drwx------ 5 boinc boinc      4096 Mar 13 02:48 pilot3
[2026-03-13 04:46:22] -rw------- 1 boinc boinc        95 Mar 13 04:45 pilot_heartbeat.json
[2026-03-13 04:46:22] -rw------- 1 boinc boinc 180852687 Mar 13 04:45 HITS.48955010._000964.pool.root.1
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc       530 Mar 13 04:45 boinc_task_state.xml
[2026-03-13 04:46:22] -rw------- 1 boinc boinc      1021 Mar 13 04:45 memory_monitor_summary.json
[2026-03-13 04:46:22] -rw------- 1 boinc boinc    269130 Mar 13 04:45 log.48955010._000964.job.log.tgz.1
[2026-03-13 04:46:22] -rw------- 1 boinc boinc      6300 Mar 13 04:46 heartbeat.json
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc      8192 Mar 13 04:46 boinc_mmap_file
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc        27 Mar 13 04:46 wrapper_checkpoint.txt
[2026-03-13 04:46:22] -rw------- 1 boinc boinc      4624 Mar 13 04:46 pilotlog.txt
[2026-03-13 04:46:22] -rw------- 1 boinc boinc   1016006 Mar 13 04:46 log.48955010._000964.job.log.1
[2026-03-13 04:46:22] -rw------- 1 boinc boinc       357 Mar 13 04:46 output.list
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc       620 Mar 13 04:46 runtime_log
[2026-03-13 04:46:22] -rw------- 1 boinc boinc   1300480 Mar 13 04:46 result.tar.gz
[2026-03-13 04:46:22] -rw------- 1 boinc boinc       657 Mar 13 04:46 xwnLDmZ5wH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDuJLDmbAIhum.diag
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc      8896 Mar 13 04:46 runtime_log.err
[2026-03-13 04:46:22] -rw-r--r-- 1 boinc boinc      9876 Mar 13 04:46 stderr.txt
[2026-03-13 04:46:22] HITS file was successfully produced:
[2026-03-13 04:46:22] -rw------- 1 boinc boinc 180852687 Mar 13 04:45 shared/HITS.pool.root.1
[2026-03-13 04:46:22]  *** Contents of shared directory: ***
[2026-03-13 04:46:22] total 605176
[2026-03-13 04:46:22] -rw-r--r-- 2 boinc boinc 436922713 Mar 13 02:47 ATLAS.root_0
[2026-03-13 04:46:22] -rw-r--r-- 2 boinc boinc    597942 Mar 13 02:47 input.tar.gz
[2026-03-13 04:46:22] -rw-r--r-- 2 boinc boinc     15845 Mar 13 02:47 start_atlas.sh
[2026-03-13 04:46:22] -rw------- 1 boinc boinc 180852687 Mar 13 04:45 HITS.pool.root.1
[2026-03-13 04:46:22] -rw------- 1 boinc boinc   1300480 Mar 13 04:46 result.tar.gz
04:46:23 (1396052): run_atlas exited; CPU time 13723.646372
04:46:23 (1396052): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN