Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:10:35 (3239151): wrapper (7.7.26015): starting
14:10:35 (3239151): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 14:10:35] Arguments: --nthreads 4
[2026-03-12 14:10:35] Threads: 4
[2026-03-12 14:10:35] Checking for CVMFS
[2026-03-12 14:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 14:10:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 14:10:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 14:10:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 14:10:36] 2.13.3.0 3889861 21884 52872 157211 0 188 3600461 6144000 6410 130560 0 47490128 99.996 825969 1050 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-03-12 14:10:36] CVMFS is ok
[2026-03-12 14:10:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 14:10:36] Checking for apptainer binary...
[2026-03-12 14:10:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 14:10:36] Running /usr/bin/apptainer --version
[2026-03-12 14:10:36] apptainer version 1.4.5
[2026-03-12 14:10:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 14:10:36] Starfish-Cruncher
[2026-03-12 14:10:36] apptainer works
[2026-03-12 14:10:36] Set ATHENA_PROC_NUMBER=4
[2026-03-12 14:10:36] Set ATHENA_CORE_NUMBER=4
[2026-03-12 14:10:36] Starting ATLAS job with PandaID=7038349146
[2026-03-12 14:10:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 16:40:09]  *** The last 200 lines of the pilot log: ***
[2026-03-12 16:40:09] 2026-03-12 21:39:14,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 16:40:09] 2026-03-12 21:39:14,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 16:40:09] 2026-03-12 21:39:14,776 | INFO     | fitting pss+swap vs Time
[2026-03-12 16:40:09] 2026-03-12 21:39:14,776 | INFO     | sum of square deviations: 964976232.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,776 | INFO     | sum of deviations: 17301320291.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,777 | INFO     | mean x: 1773347089.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,777 | INFO     | mean y: 2303559.2260273974
[2026-03-12 16:40:09] 2026-03-12 21:39:14,777 | INFO     | intersect: -31792516820.910965
[2026-03-12 16:40:09] 2026-03-12 21:39:14,777 | INFO     | chi2: 1.2169382976389083
[2026-03-12 16:40:09] 2026-03-12 21:39:14,777 | INFO     | sum of square deviations: 869188390.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | sum of deviations: 16619013666.999998
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | mean x: 1773346937.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | mean y: 2302472.4680851065
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | intersect: -33904359560.069626
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | chi2: 1.2180613564133262
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | current chi2=1.2180613564133262 (change=-0.09228559710849202 %)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | right removable region: 140
[2026-03-12 16:40:09] 2026-03-12 21:39:14,778 | INFO     | sum of square deviations: 869188390.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,779 | INFO     | sum of deviations: 2743117234.9999995
[2026-03-12 16:40:09] 2026-03-12 21:39:14,779 | INFO     | mean x: 1773347242.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,779 | INFO     | mean y: 2326200.914893617
[2026-03-12 16:40:09] 2026-03-12 21:39:14,779 | INFO     | intersect: -5594273384.555773
[2026-03-12 16:40:09] 2026-03-12 21:39:14,779 | INFO     | chi2: 0.0009116713651927841
[2026-03-12 16:40:09] 2026-03-12 21:39:14,780 | INFO     | current chi2=0.0009116713651927841 (change=99.92508483240591 %)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,780 | INFO     | sum of square deviations: 779958810.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,780 | INFO     | sum of deviations: 1909537320.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,780 | INFO     | mean x: 1773347394.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,780 | INFO     | mean y: 2327619.3161764704
[2026-03-12 16:40:09] 2026-03-12 21:39:14,780 | INFO     | intersect: -4339277332.885321
[2026-03-12 16:40:09] 2026-03-12 21:39:14,781 | INFO     | chi2: 0.00013172119138403704
[2026-03-12 16:40:09] 2026-03-12 21:39:14,781 | INFO     | current chi2=0.00013172119138403704 (change=85.55168052731558 %)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,781 | INFO     | sum of square deviations: 697054930.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,781 | INFO     | sum of deviations: 1596748871.0000002
[2026-03-12 16:40:09] 2026-03-12 21:39:14,782 | INFO     | mean x: 1773347547.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,782 | INFO     | mean y: 2328195.7862595418
[2026-03-12 16:40:09] 2026-03-12 21:39:14,782 | INFO     | intersect: -4059892113.8281775
[2026-03-12 16:40:09] 2026-03-12 21:39:14,782 | INFO     | chi2: 9.367809427857566e-05
[2026-03-12 16:40:09] 2026-03-12 21:39:14,782 | INFO     | current chi2=9.367809427857566e-05 (change=28.88153129024289 %)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,782 | INFO     | sum of square deviations: 620244187.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | sum of deviations: 1390929228.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | mean x: 1773347699.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | mean y: 2328601.722222222
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | intersect: -3974494071.0864367
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | chi2: 7.724397079676156e-05
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | current chi2=7.724397079676156e-05 (change=17.54318723963689 %)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | left removable region: 40
[2026-03-12 16:40:09] 2026-03-12 21:39:14,783 | INFO     | sum of square deviations: 310052325.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | sum of deviations: 770648929.0
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | mean x: 1773348126.5
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | mean y: 2329660.12
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | intersect: -4405406467.7461
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | chi2: 6.126189979040033e-05
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | current memory leak: 2.49 B/s (using 100 data points, chi2=0.00)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,784 | INFO     | could have reported an average CPU frequency of 3602 MHz (8 samples)
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | ..............................
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . Timing measurements:
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . get job = 0 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . initial setup = 5 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . payload setup = 4 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . stage-in = 0 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . payload execution = 8881 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . stage-out = 0 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | . log creation = 0 s
[2026-03-12 16:40:09] 2026-03-12 21:39:14,785 | INFO     | ..............................
[2026-03-12 16:40:09] 2026-03-12 21:39:14,945 | INFO     | time since job start (8907s) is within the limit (349056.0s)
[2026-03-12 16:40:09] 2026-03-12 21:39:15,309 | INFO     | 
[2026-03-12 16:40:09] 2026-03-12 21:39:15,309 | INFO     | job summary report
[2026-03-12 16:40:09] 2026-03-12 21:39:15,309 | INFO     | --------------------------------------------------
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | PanDA job id: 7038349146
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | task id: 48838610
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | errors: (none)
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | pilot state: finished 
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | transexitcode: 0
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | exeerrorcode: 0
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | exeerrordiag: 
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | exitcode: 0
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | exitmsg: OK
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | cpuconsumptiontime: 34270 s
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | nevents: 400
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | neventsw: 0
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | pid: 3247768
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | pgrp: 3247768
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | corecount: 4
[2026-03-12 16:40:09] 2026-03-12 21:39:15,310 | INFO     | event service: False
[2026-03-12 16:40:09] 2026-03-12 21:39:15,311 | INFO     | sizes: {0: 2280157, 11: 2280157, 8889: 2317468, 8893: 2317468, 8896: 2317662}
[2026-03-12 16:40:09] 2026-03-12 21:39:15,311 | INFO     | --------------------------------------------------
[2026-03-12 16:40:09] 2026-03-12 21:39:15,311 | INFO     | 
[2026-03-12 16:40:09] 2026-03-12 21:39:15,311 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-03-12 16:40:09] 2026-03-12 21:39:15,332 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | job 7038349146 has completed (purged errors)
[2026-03-12 16:40:09] 2026-03-12 21:39:15,334 | INFO     | overall cleanup function is called
[2026-03-12 16:40:09] 2026-03-12 21:39:16,340 | INFO     | --- collectZombieJob: --- 10, [3247768]
[2026-03-12 16:40:09] 2026-03-12 21:39:16,340 | INFO     | zombie collector waiting for pid 3247768
[2026-03-12 16:40:09] 2026-03-12 21:39:16,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 16:40:09] 2026-03-12 21:39:16,341 | INFO     | collected zombie processes
[2026-03-12 16:40:09] 2026-03-12 21:39:16,341 | INFO     | will attempt to kill all subprocesses of pid=3247768
[2026-03-12 16:40:09] 2026-03-12 21:39:16,495 | INFO     | process IDs to be killed: [3247768] (in reverse order)
[2026-03-12 16:40:09] 2026-03-12 21:39:16,561 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 16:40:09] 2026-03-12 21:39:16,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 16:40:09] 2026-03-12 21:39:16,566 | INFO     | did not find any defunct processes belonging to 3247768
[2026-03-12 16:40:09] 2026-03-12 21:39:16,571 | INFO     | did not find any defunct processes belonging to 3247768
[2026-03-12 16:40:09] 2026-03-12 21:39:16,571 | INFO     | ready for new job
[2026-03-12 16:40:09] 2026-03-12 21:39:16,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 16:40:09] 2026-03-12 21:39:16,573 | INFO     | **************************************
[2026-03-12 16:40:09] 2026-03-12 21:39:16,573 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 16:40:09] 2026-03-12 21:39:16,573 | INFO     | **************************************
[2026-03-12 16:40:09] 2026-03-12 21:39:16,573 | INFO     | 
[2026-03-12 16:40:09] 2026-03-12 21:39:16,574 | INFO     | architecture information:
[2026-03-12 16:40:09] 2026-03-12 21:39:16,575 | INFO     | executing command: cat /etc/os-release
[2026-03-12 16:40:09] 2026-03-12 21:39:16,588 | INFO     | cat /etc/os-release:
[2026-03-12 16:40:09] NAME="CentOS Linux"
[2026-03-12 16:40:09] VERSION="7 (Core)"
[2026-03-12 16:40:09] ID="centos"
[2026-03-12 16:40:09] ID_LIKE="rhel fedora"
[2026-03-12 16:40:09] VERSION_ID="7"
[2026-03-12 16:40:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 16:40:09] ANSI_COLOR="0;31"
[2026-03-12 16:40:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 16:40:09] HOME_URL="https://www.centos.org/"
[2026-03-12 16:40:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 16:40:09] 
[2026-03-12 16:40:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 16:40:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 16:40:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 16:40:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 16:40:09] 
[2026-03-12 16:40:09] 2026-03-12 21:39:16,588 | INFO     | **************************************
[2026-03-12 16:40:09] 2026-03-12 21:39:17,092 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-03-12 16:40:09] 2026-03-12 21:39:17,106 | INFO     | sufficient remaining disk space (1808265117696 B)
[2026-03-12 16:40:09] 2026-03-12 21:39:17,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 16:40:09] 2026-03-12 21:39:17,107 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 16:40:09] 2026-03-12 21:39:17,107 | INFO     | update_server=False
[2026-03-12 16:40:09] 2026-03-12 21:39:17,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 16:40:09] 2026-03-12 21:39:17,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:40:09] 2026-03-12 21:39:17,107 | INFO     | aborting loop
[2026-03-12 16:40:09] 2026-03-12 21:39:17,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 16:40:09] 2026-03-12 21:39:17,852 | INFO     | all payload control threads have been joined
[2026-03-12 16:40:09] 2026-03-12 21:39:17,946 | INFO     | all job control threads have been joined
[2026-03-12 16:40:09] 2026-03-12 21:39:17,946 | INFO     | all data control threads have been joined
[2026-03-12 16:40:09] 2026-03-12 21:39:18,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 16:40:09] 2026-03-12 21:39:18,109 | INFO     | [job] retrieve thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,109 | INFO     | [job] job monitor thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,227 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,424 | INFO     | [data] copytool_in thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,453 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,748 | INFO     | [payload] validate_post thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,853 | INFO     | [payload] control thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,951 | INFO     | [job] control thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:18,951 | INFO     | [data] control thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:19,106 | INFO     | [job] validate thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:19,112 | INFO     | [data] copytool_out thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:19,490 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:19,492 | INFO     | [payload] failed_post thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:19,565 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:19,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:40:09] 2026-03-12 21:39:20,871 | INFO     | [job] queue monitor thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:22,007 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 16:40:09] 2026-03-12 21:39:48,218 | INFO     | PID=3243051 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 16:40:09] 2026-03-12 21:39:48,218 | INFO     | .. there are 8 such processes running
[2026-03-12 16:40:09] 2026-03-12 21:39:48,219 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 16:40:09] 2026-03-12 21:39:48,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 16:40:09] 2026-03-12 21:39:48,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 16:40:09] 2026-03-12 21:40:02,156 | INFO     | [monitor] cgroup control has ended
[2026-03-12 16:40:09] 2026-03-12 21:40:04,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135733056669504)>', '<ExcThread(monitor, started 135732416988928)>']
[2026-03-12 16:40:09] 2026-03-12 21:40:04,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 16:40:09] 2026-03-12 21:40:04,284 | INFO     | [monitor] control thread has ended
[2026-03-12 16:40:09] 2026-03-12 21:40:09,037 | INFO     | all workflow threads have been joined
[2026-03-12 16:40:09] 2026-03-12 21:40:09,037 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 16:40:09] 2026-03-12 21:40:09,038 | INFO     | traces error code: 0
[2026-03-12 16:40:09] 2026-03-12 21:40:09,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 16:40:09] 2026-03-12 21:40:09,120 [wrapper] ==== pilot stdout END ====
[2026-03-12 16:40:09] 2026-03-12 21:40:09,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 16:40:09] 2026-03-12 21:40:09,124 [wrapper] pilotpid: 3243051
[2026-03-12 16:40:09] 2026-03-12 21:40:09,127 [wrapper] Pilot exit status: 0
[2026-03-12 16:40:09] 2026-03-12 21:40:09,144 [wrapper] pandaids: 7038349146
[2026-03-12 16:40:09] 2026-03-12 21:40:09,201 [wrapper] cleanup supervisor_pilot 3383713 3243052
[2026-03-12 16:40:09] 2026-03-12 21:40:09,204 [wrapper] Test setup, not cleaning
[2026-03-12 16:40:09] 2026-03-12 21:40:09,206 [wrapper] apfmon messages muted
[2026-03-12 16:40:09] 2026-03-12 21:40:09,207 [wrapper] ==== wrapper stdout END ====
[2026-03-12 16:40:09] 2026-03-12 21:40:09,209 [wrapper] ==== wrapper stderr END ====
[2026-03-12 16:40:09]  *** Error codes and diagnostics ***
[2026-03-12 16:40:09]     "exeErrorCode": 0,
[2026-03-12 16:40:09]     "exeErrorDiag": "",
[2026-03-12 16:40:09]     "pilotErrorCode": 0,
[2026-03-12 16:40:09]     "pilotErrorDiag": "",
[2026-03-12 16:40:09]  *** Listing of results directory ***
[2026-03-12 16:40:09] total 479568
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc    584627 Mar  4 02:44 pilot3.tar.gz
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc      5111 Mar  4 02:45 queuedata.json
[2026-03-12 16:40:09] -rwx------ 1 boinc boinc     36322 Mar  4 02:46 runpilot2-wrapper.sh
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc       100 Mar 12 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 16:40:09] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 14:10 run_atlas
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc       105 Mar 12 14:10 job.xml
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc      9665 Mar 12 14:10 init_data.xml
[2026-03-12 16:40:09] -rw-r--r-- 2 boinc boinc 275496207 Mar 12 14:10 EVNT.48343779._000092.pool.root.1
[2026-03-12 16:40:09] -rw-r--r-- 2 boinc boinc     15845 Mar 12 14:10 start_atlas.sh
[2026-03-12 16:40:09] drwxrwx--x 2 boinc boinc      4096 Mar 12 14:10 shared
[2026-03-12 16:40:09] -rw-r--r-- 2 boinc boinc    597979 Mar 12 14:10 input.tar.gz
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc         0 Mar 12 14:10 boinc_lockfile
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc      2578 Mar 12 14:10 pandaJob.out
[2026-03-12 16:40:09] -rw------- 1 boinc boinc   1006522 Mar 12 14:10 agis_schedconf.cvmfs.json
[2026-03-12 16:40:09] -rw------- 1 boinc boinc   1511578 Mar 12 14:10 agis_ddmendpoints.agis.ALL.json
[2026-03-12 16:40:09] -rw------- 1 boinc boinc       428 Mar 12 14:10 workernode_map.json
[2026-03-12 16:40:09] drwx------ 5 boinc boinc      4096 Mar 12 14:10 pilot3
[2026-03-12 16:40:09] -rw------- 1 boinc boinc 208419808 Mar 12 16:38 HITS.48838610._002639.pool.root.1
[2026-03-12 16:40:09] -rw------- 1 boinc boinc        95 Mar 12 16:39 pilot_heartbeat.json
[2026-03-12 16:40:09] -rw------- 1 boinc boinc      1026 Mar 12 16:39 memory_monitor_summary.json
[2026-03-12 16:40:09] -rw------- 1 boinc boinc    327067 Mar 12 16:39 log.48838610._002639.job.log.tgz.1
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc       529 Mar 12 16:39 boinc_task_state.xml
[2026-03-12 16:40:09] -rw------- 1 boinc boinc      6304 Mar 12 16:39 heartbeat.json
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc      8192 Mar 12 16:39 boinc_mmap_file
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc        27 Mar 12 16:39 wrapper_checkpoint.txt
[2026-03-12 16:40:09] -rw------- 1 boinc boinc      4828 Mar 12 16:40 pilotlog.txt
[2026-03-12 16:40:09] -rw------- 1 boinc boinc   1285454 Mar 12 16:40 log.48838610._002639.job.log.1
[2026-03-12 16:40:09] -rw------- 1 boinc boinc       357 Mar 12 16:40 output.list
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc       620 Mar 12 16:40 runtime_log
[2026-03-12 16:40:09] -rw------- 1 boinc boinc   1628160 Mar 12 16:40 result.tar.gz
[2026-03-12 16:40:09] -rw------- 1 boinc boinc       653 Mar 12 16:40 utSMDm02wH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7rHLDmFCZrzn.diag
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc      8932 Mar 12 16:40 runtime_log.err
[2026-03-12 16:40:09] -rw-r--r-- 1 boinc boinc     20604 Mar 12 16:40 stderr.txt
[2026-03-12 16:40:09] HITS file was successfully produced:
[2026-03-12 16:40:09] -rw------- 1 boinc boinc 208419808 Mar 12 16:38 shared/HITS.pool.root.1
[2026-03-12 16:40:09]  *** Contents of shared directory: ***
[2026-03-12 16:40:09] total 474776
[2026-03-12 16:40:09] -rw-r--r-- 2 boinc boinc 275496207 Mar 12 14:10 ATLAS.root_0
[2026-03-12 16:40:09] -rw-r--r-- 2 boinc boinc     15845 Mar 12 14:10 start_atlas.sh
[2026-03-12 16:40:09] -rw-r--r-- 2 boinc boinc    597979 Mar 12 14:10 input.tar.gz
[2026-03-12 16:40:09] -rw------- 1 boinc boinc 208419808 Mar 12 16:38 HITS.pool.root.1
[2026-03-12 16:40:09] -rw------- 1 boinc boinc   1628160 Mar 12 16:40 result.tar.gz
16:40:10 (3239151): run_atlas exited; CPU time 34409.429176
16:40:10 (3239151): called boinc_finish(0)

</stderr_txt>
]]>

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