Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:38:26 (12208): wrapper (7.7.26015): starting
15:38:26 (12208): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 15:38:26] Arguments: --nthreads 8
[2026-03-12 15:38:26] Threads: 8
[2026-03-12 15:38:26] Checking for CVMFS
[2026-03-12 15:38:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 15:38:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 15:38:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 15:38:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 15:38:27] 2.11.0.0 4322 125048 84084 157203 1 188 3727337 4096001 2751 130560 0 5376677 99.503 6896464 310 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-12 15:38:27] CVMFS is ok
[2026-03-12 15:38:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 15:38:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 15:38:27] Further information can be found at the LHC@home message board.
[2026-03-12 15:38:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 15:38:27] Checking for apptainer binary...
[2026-03-12 15:38:27] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-12 15:38:27] apptainer is not installed, using version from CVMFS
[2026-03-12 15:38:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 15:38:27] WARNING: Environment variable TMPDIR already has value [/tmp/job_11300103/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node240
[2026-03-12 15:38:27] apptainer works
[2026-03-12 15:38:27] Set ATHENA_PROC_NUMBER=8
[2026-03-12 15:38:27] Set ATHENA_CORE_NUMBER=8
[2026-03-12 15:38:27] Starting ATLAS job with PandaID=7037260886
[2026-03-12 15:38:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11300103/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 16:22:44]  *** The last 200 lines of the pilot log: ***
[2026-03-12 16:22:44]  filetype=log
[2026-03-12 16:22:44]  guid=b5510d66-7106-4b7b-b224-35b03dbd66b3
[2026-03-12 16:22:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 16:22:44]  is_altstaged=None
[2026-03-12 16:22:44]  is_tar=False
[2026-03-12 16:22:44]  lfn=log.48937823._000061.job.log.tgz.1
[2026-03-12 16:22:44]  mtime=0
[2026-03-12 16:22:44]  protocol_id=None
[2026-03-12 16:22:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 16:22:44]  replicas=None
[2026-03-12 16:22:44]  scope=mc23_13p6TeV
[2026-03-12 16:22:44]  status=None
[2026-03-12 16:22:44]  status_code=0
[2026-03-12 16:22:44]  storage_token=
[2026-03-12 16:22:44]  surl=/tmp/job_11300103/atlas/pilot/slots/0/PanDA_Pilot-7037260886/log.48937823._000061.job.log.tgz.1
[2026-03-12 16:22:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/f1/log.48937823._000061.job.log.tgz.1
[2026-03-12 16:22:44]  workdir=None
[2026-03-12 16:22:44] ]
[2026-03-12 16:22:44] 2026-03-12 15:22:05,975 | INFO     | transferring file log.48937823._000061.job.log.tgz.1 from /tmp/job_11300103/atlas/pilot/slots/0/PanDA_Pilot-7037260886/log.48937823._000061.job.log.tgz.1 to /tmp/j
[2026-03-12 16:22:44] 2026-03-12 15:22:05,975 | INFO     | executing command: /usr/bin/env mv /tmp/job_11300103/atlas/pilot/slots/0/PanDA_Pilot-7037260886/log.48937823._000061.job.log.tgz.1 /tmp/job_11300103/atlas/pilot/sl
[2026-03-12 16:22:44] 2026-03-12 15:22:05,983 | INFO     | adding to output.list: log.48937823._000061.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/f1/log.48937823._000061.job.log.tg
[2026-03-12 16:22:44] 2026-03-12 15:22:05,984 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 16:22:44] 2026-03-12 15:22:05,984 | INFO     | summary of transferred files:
[2026-03-12 16:22:44] 2026-03-12 15:22:05,984 | INFO     |  -- lfn=log.48937823._000061.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 16:22:44] 2026-03-12 15:22:05,984 | INFO     | stage-out finished correctly
[2026-03-12 16:22:44] 2026-03-12 15:22:06,033 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 16:22:44] 2026-03-12 15:22:06,419 | INFO     | monitor loop #199: job 0:7037260886 is in state 'finished'
[2026-03-12 16:22:44] 2026-03-12 15:22:06,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,506 | INFO     | job 7037260886 has state=finished
[2026-03-12 16:22:44] 2026-03-12 15:22:06,506 | INFO     | preparing for final server update for job 7037260886 in state='finished'
[2026-03-12 16:22:44] 2026-03-12 15:22:06,506 | INFO     | reading metadata from: /tmp/job_11300103/atlas/pilot/slots/0/PanDA_Pilot-7037260886/jobReport.json
[2026-03-12 16:22:44] 2026-03-12 15:22:06,507 | INFO     | added worker_node to metadata from /tmp/job_11300103/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 16:22:44] 2026-03-12 15:22:06,507 | INFO     | this job has now completed (state=finished)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,507 | INFO     | log transfer has been attempted: DONE
[2026-03-12 16:22:44] 2026-03-12 15:22:06,507 | INFO     | job 7037260886 has finished - writing final server update
[2026-03-12 16:22:44] 2026-03-12 15:22:06,507 | INFO     | total number of processed events: 400 (read)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,525 | INFO     | using path: /tmp/job_11300103/atlas/pilot/slots/0/PanDA_Pilot-7037260886/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,525 | INFO     | extracted standard info from prmon json
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | INFO     | fitting pss+swap vs Time
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | INFO     | sum of square deviations: 14456085.0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,526 | INFO     | sum of deviations: -1438942542.0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | mean x: 1773327701.5
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | mean y: 2663939.611111111
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | intersect: 176517721134.9325
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | chi2: 0.01504392055995653
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | current memory leak: -99.54 B/s (using 36 data points, chi2=0.02)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | could have reported an average CPU frequency of 2739 MHz (5 samples)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | ..............................
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . Timing measurements:
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . get job = 0 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . initial setup = 2 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . payload setup = 2 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . stage-in = 0 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . payload execution = 2593 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . stage-out = 0 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | . log creation = 0 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,527 | INFO     | ..............................
[2026-03-12 16:22:44] 2026-03-12 15:22:06,652 | INFO     | time since job start (2613s) is within the limit (349056.0s)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | 
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | job summary report
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | --------------------------------------------------
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | PanDA job id: 7037260886
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | task id: 48937823
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | errors: (none)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | pilot state: finished 
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | transexitcode: 0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | exeerrorcode: 0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | exeerrordiag: 
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | exitcode: 0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | exitmsg: OK
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | cpuconsumptiontime: 18908 s
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | nevents: 400
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | neventsw: 0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | pid: 20580
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | pgrp: 20580
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | corecount: 8
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | event service: False
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | sizes: {0: 2279788, 1: 2280360, 11: 2280360, 2600: 2305667, 2601: 2314751, 2602: 2314921}
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | --------------------------------------------------
[2026-03-12 16:22:44] 2026-03-12 15:22:06,943 | INFO     | 
[2026-03-12 16:22:44] 2026-03-12 15:22:06,944 | INFO     | executing command: ls -lF /tmp/job_11300103/atlas/pilot/slots/0
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | job 7037260886 has completed (purged errors)
[2026-03-12 16:22:44] 2026-03-12 15:22:06,954 | INFO     | overall cleanup function is called
[2026-03-12 16:22:44] 2026-03-12 15:22:07,960 | INFO     | --- collectZombieJob: --- 10, [20580]
[2026-03-12 16:22:44] 2026-03-12 15:22:07,960 | INFO     | zombie collector waiting for pid 20580
[2026-03-12 16:22:44] 2026-03-12 15:22:07,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 16:22:44] 2026-03-12 15:22:07,960 | INFO     | collected zombie processes
[2026-03-12 16:22:44] 2026-03-12 15:22:07,960 | INFO     | will attempt to kill all subprocesses of pid=20580
[2026-03-12 16:22:44] 2026-03-12 15:22:08,059 | INFO     | process IDs to be killed: [20580] (in reverse order)
[2026-03-12 16:22:44] 2026-03-12 15:22:08,094 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 16:22:44] 2026-03-12 15:22:08,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 16:22:44] 2026-03-12 15:22:08,097 | INFO     | did not find any defunct processes belonging to 20580
[2026-03-12 16:22:44] 2026-03-12 15:22:08,100 | INFO     | did not find any defunct processes belonging to 20580
[2026-03-12 16:22:44] 2026-03-12 15:22:08,100 | INFO     | ready for new job
[2026-03-12 16:22:44] 2026-03-12 15:22:08,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 16:22:44] 2026-03-12 15:22:08,101 | INFO     | **************************************
[2026-03-12 16:22:44] 2026-03-12 15:22:08,101 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 16:22:44] 2026-03-12 15:22:08,101 | INFO     | **************************************
[2026-03-12 16:22:44] 2026-03-12 15:22:08,101 | INFO     | 
[2026-03-12 16:22:44] 2026-03-12 15:22:08,116 | INFO     | architecture information:
[2026-03-12 16:22:44] 2026-03-12 15:22:08,116 | INFO     | executing command: cat /etc/os-release
[2026-03-12 16:22:44] 2026-03-12 15:22:08,122 | INFO     | cat /etc/os-release:
[2026-03-12 16:22:44] NAME="CentOS Linux"
[2026-03-12 16:22:44] VERSION="7 (Core)"
[2026-03-12 16:22:44] ID="centos"
[2026-03-12 16:22:44] ID_LIKE="rhel fedora"
[2026-03-12 16:22:44] VERSION_ID="7"
[2026-03-12 16:22:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 16:22:44] ANSI_COLOR="0;31"
[2026-03-12 16:22:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 16:22:44] HOME_URL="https://www.centos.org/"
[2026-03-12 16:22:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 16:22:44] 
[2026-03-12 16:22:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 16:22:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 16:22:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 16:22:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 16:22:44] 
[2026-03-12 16:22:44] 2026-03-12 15:22:08,122 | INFO     | **************************************
[2026-03-12 16:22:44] 2026-03-12 15:22:08,625 | INFO     | executing command: df -mP /tmp/job_11300103/atlas/pilot/slots/0
[2026-03-12 16:22:44] 2026-03-12 15:22:08,631 | INFO     | sufficient remaining disk space (223416942592 B)
[2026-03-12 16:22:44] 2026-03-12 15:22:08,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 16:22:44] 2026-03-12 15:22:08,631 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 16:22:44] 2026-03-12 15:22:08,631 | INFO     | update_server=False
[2026-03-12 16:22:44] 2026-03-12 15:22:08,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 16:22:44] 2026-03-12 15:22:08,631 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-12 16:22:44] 2026-03-12 15:22:08,632 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 16:22:44] 2026-03-12 15:22:08,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 16:22:44] 2026-03-12 15:22:08,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 16:22:44] 2026-03-12 15:22:08,921 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 16:22:44] 2026-03-12 15:22:08,922 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 16:22:44] 2026-03-12 15:22:08,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:22:44] 2026-03-12 15:22:08,922 | INFO     | will abort loop
[2026-03-12 16:22:44] 2026-03-12 15:22:09,033 | INFO     | all job control threads have been joined
[2026-03-12 16:22:44] 2026-03-12 15:22:09,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 16:22:44] 2026-03-12 15:22:09,233 | INFO     | all data control threads have been joined
[2026-03-12 16:22:44] 2026-03-12 15:22:09,637 | INFO     | [job] retrieve thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:09,762 | INFO     | [payload] failed_post thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:09,801 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:09,818 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:09,927 | INFO     | [job] job monitor thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:09,936 | INFO     | all payload control threads have been joined
[2026-03-12 16:22:44] 2026-03-12 15:22:10,014 | INFO     | [data] copytool_in thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:10,038 | INFO     | [job] control thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:10,210 | INFO     | job.realtimelogging is not enabled
[2026-03-12 16:22:44] 2026-03-12 15:22:10,238 | INFO     | [data] control thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:10,452 | INFO     | [payload] validate_post thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:10,941 | INFO     | [payload] control thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:11,048 | INFO     | [data] copytool_out thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:11,068 | INFO     | [job] validate thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:11,122 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:11,216 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:11,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:22:44] 2026-03-12 15:22:12,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 16:22:44] 2026-03-12 15:22:12,588 | INFO     | [job] queue monitor thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:16,089 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 16:22:44] 2026-03-12 15:22:37,679 | INFO     | [monitor] cgroup control has ended
[2026-03-12 16:22:44] 2026-03-12 15:22:39,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-12 16:22:44] 2026-03-12 15:22:39,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 16:22:44] 2026-03-12 15:22:39,785 | INFO     | [monitor] control thread has ended
[2026-03-12 16:22:44] 2026-03-12 15:22:44,355 | INFO     | all workflow threads have been joined
[2026-03-12 16:22:44] 2026-03-12 15:22:44,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 16:22:44] 2026-03-12 15:22:44,355 | INFO     | traces error code: 0
[2026-03-12 16:22:44] 2026-03-12 15:22:44,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 16:22:44] 2026-03-12 15:22:44,406 [wrapper] ==== pilot stdout END ====
[2026-03-12 16:22:44] 2026-03-12 15:22:44,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 16:22:44] 2026-03-12 15:22:44,409 [wrapper] pilotpid: 15972
[2026-03-12 16:22:44] 2026-03-12 15:22:44,410 [wrapper] Pilot exit status: 0
[2026-03-12 16:22:44] 2026-03-12 15:22:44,415 [wrapper] pandaids: 7037260886
[2026-03-12 16:22:44] 2026-03-12 15:22:44,437 [wrapper] cleanup supervisor_pilot 31627 15973
[2026-03-12 16:22:44] 2026-03-12 15:22:44,438 [wrapper] Test setup, not cleaning
[2026-03-12 16:22:44] 2026-03-12 15:22:44,439 [wrapper] apfmon messages muted
[2026-03-12 16:22:44] 2026-03-12 15:22:44,440 [wrapper] ==== wrapper stdout END ====
[2026-03-12 16:22:44] 2026-03-12 15:22:44,441 [wrapper] ==== wrapper stderr END ====
[2026-03-12 16:22:44]  *** Error codes and diagnostics ***
[2026-03-12 16:22:44]     "exeErrorCode": 0,
[2026-03-12 16:22:44]     "exeErrorDiag": "",
[2026-03-12 16:22:44]     "pilotErrorCode": 0,
[2026-03-12 16:22:44]     "pilotErrorDiag": "",
[2026-03-12 16:22:44]  *** Listing of results directory ***
[2026-03-12 16:22:44] total 442772
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user    584627 Mar  4 07:10 pilot3.tar.gz
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      5111 Mar  4 07:10 queuedata.json
[2026-03-12 16:22:44] -rwx------ 1 mf493845 unix-user     36322 Mar  4 07:10 runpilot2-wrapper.sh
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user       100 Mar 12 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 16:22:44] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 12 14:31 run_atlas
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user       105 Mar 12 14:31 job.xml
[2026-03-12 16:22:44] -rw-r--r-- 2 mf493845 unix-user 263953014 Mar 12 15:38 EVNT.48564773._000003.pool.root.1
[2026-03-12 16:22:44] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 15:38 start_atlas.sh
[2026-03-12 16:22:44] drwxrwx--x 2 mf493845 unix-user       100 Mar 12 15:38 shared
[2026-03-12 16:22:44] -rw-r--r-- 2 mf493845 unix-user    597944 Mar 12 15:38 input.tar.gz
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      6390 Mar 12 15:38 init_data.xml
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user         0 Mar 12 15:38 boinc_setup_complete
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      8192 Mar 12 15:38 boinc_mmap_file
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user         0 Mar 12 15:38 boinc_lockfile
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      2549 Mar 12 15:38 pandaJob.out
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user   1006554 Mar 12 15:38 agis_schedconf.cvmfs.json
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user   1511578 Mar 12 15:38 agis_ddmendpoints.agis.ALL.json
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user       420 Mar 12 15:38 workernode_map.json
[2026-03-12 16:22:44] drwx------ 5 mf493845 unix-user       440 Mar 12 15:38 pilot3
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user 184112588 Mar 12 16:21 HITS.48937823._000061.pool.root.1
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      1017 Mar 12 16:22 memory_monitor_summary.json
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user    291244 Mar 12 16:22 log.48937823._000061.job.log.tgz.1
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      6306 Mar 12 16:22 heartbeat.json
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user        95 Mar 12 16:22 pilot_heartbeat.json
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      4820 Mar 12 16:22 pilotlog.txt
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user    421112 Mar 12 16:22 log.48937823._000061.job.log.1
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user       357 Mar 12 16:22 output.list
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user       620 Mar 12 16:22 runtime_log
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user    727040 Mar 12 16:22 result.tar.gz
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user      9219 Mar 12 16:22 runtime_log.err
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user       642 Mar 12 16:22 AVcMDmrcuH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcYHLDmWZUfHo.diag
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user     21701 Mar 12 16:22 stderr.txt
[2026-03-12 16:22:44] HITS file was successfully produced:
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user 184112588 Mar 12 16:21 shared/HITS.pool.root.1
[2026-03-12 16:22:44]  *** Contents of shared directory: ***
[2026-03-12 16:22:44] total 438880
[2026-03-12 16:22:44] -rw-r--r-- 2 mf493845 unix-user 263953014 Mar 12 15:38 ATLAS.root_0
[2026-03-12 16:22:44] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 15:38 start_atlas.sh
[2026-03-12 16:22:44] -rw-r--r-- 2 mf493845 unix-user    597944 Mar 12 15:38 input.tar.gz
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user 184112588 Mar 12 16:21 HITS.pool.root.1
[2026-03-12 16:22:44] -rw------- 1 mf493845 unix-user    727040 Mar 12 16:22 result.tar.gz
16:22:45 (12208): run_atlas exited; CPU time 18943.751290
16:22:45 (12208): called boinc_finish(0)

</stderr_txt>
]]>

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