Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:56:42 (7805): wrapper (7.7.26015): starting
14:56:42 (7805): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 14:56:42] Arguments: --nthreads 8
[2026-03-12 14:56:42] Threads: 8
[2026-03-12 14:56:42] Checking for CVMFS
[2026-03-12 14:56:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 14:56:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 14:56:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 14:56:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 14:56:43] 2.11.0.0 4333 141434 106892 157202 3 1 2050471 4096001 0 130560 4 12278503 99.629 8283084 344 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-12 14:56:43] CVMFS is ok
[2026-03-12 14:56:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 14:56:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 14:56:43] Further information can be found at the LHC@home message board.
[2026-03-12 14:56:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 14:56:43] Checking for apptainer binary...
[2026-03-12 14:56:43] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-12 14:56:43] apptainer is not installed, using version from CVMFS
[2026-03-12 14:56:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 14:56:43] WARNING: Environment variable TMPDIR already has value [/tmp/job_11300052/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node176
[2026-03-12 14:56:43] apptainer works
[2026-03-12 14:56:43] Set ATHENA_PROC_NUMBER=8
[2026-03-12 14:56:43] Set ATHENA_CORE_NUMBER=8
[2026-03-12 14:56:43] Starting ATLAS job with PandaID=7037293983
[2026-03-12 14:56:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11300052/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 15:35:22]  *** The last 200 lines of the pilot log: ***
[2026-03-12 15:35:22]  filetype=log
[2026-03-12 15:35:22]  guid=43e56d4f-a36f-4b8c-a684-2b356a6d4144
[2026-03-12 15:35:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 15:35:22]  is_altstaged=None
[2026-03-12 15:35:22]  is_tar=False
[2026-03-12 15:35:22]  lfn=log.48700874._001594.job.log.tgz.1
[2026-03-12 15:35:22]  mtime=0
[2026-03-12 15:35:22]  protocol_id=None
[2026-03-12 15:35:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 15:35:22]  replicas=None
[2026-03-12 15:35:22]  scope=mc23_13p6TeV
[2026-03-12 15:35:22]  status=None
[2026-03-12 15:35:22]  status_code=0
[2026-03-12 15:35:22]  storage_token=
[2026-03-12 15:35:22]  surl=/tmp/job_11300052/atlas/pilot/slots/0/PanDA_Pilot-7037293983/log.48700874._001594.job.log.tgz.1
[2026-03-12 15:35:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/05/log.48700874._001594.job.log.tgz.1
[2026-03-12 15:35:22]  workdir=None
[2026-03-12 15:35:22] ]
[2026-03-12 15:35:22] 2026-03-12 14:34:47,686 | INFO     | transferring file log.48700874._001594.job.log.tgz.1 from /tmp/job_11300052/atlas/pilot/slots/0/PanDA_Pilot-7037293983/log.48700874._001594.job.log.tgz.1 to /tmp/j
[2026-03-12 15:35:22] 2026-03-12 14:34:47,686 | INFO     | executing command: /usr/bin/env mv /tmp/job_11300052/atlas/pilot/slots/0/PanDA_Pilot-7037293983/log.48700874._001594.job.log.tgz.1 /tmp/job_11300052/atlas/pilot/sl
[2026-03-12 15:35:22] 2026-03-12 14:34:47,694 | INFO     | adding to output.list: log.48700874._001594.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/05/log.48700874._001594.job.log.tg
[2026-03-12 15:35:22] 2026-03-12 14:34:47,695 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 15:35:22] 2026-03-12 14:34:47,695 | INFO     | summary of transferred files:
[2026-03-12 15:35:22] 2026-03-12 14:34:47,695 | INFO     |  -- lfn=log.48700874._001594.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 15:35:22] 2026-03-12 14:34:47,695 | INFO     | stage-out finished correctly
[2026-03-12 15:35:22] 2026-03-12 14:34:48,467 | INFO     | PID=11735 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 15:35:22] 2026-03-12 14:34:48,467 | INFO     | .. there are 2 such processes running
[2026-03-12 15:35:22] 2026-03-12 14:34:48,569 | INFO     | monitor loop #176: job 0:7037293983 is in state 'finished'
[2026-03-12 15:35:22] 2026-03-12 14:34:48,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 15:35:22] 2026-03-12 14:34:49,467 | INFO     | time since job start (2278s) is within the limit (349056.0s)
[2026-03-12 15:35:22] 2026-03-12 14:34:49,854 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 15:35:22] 2026-03-12 14:34:50,939 | INFO     | job 7037293983 has state=finished
[2026-03-12 15:35:22] 2026-03-12 14:34:50,940 | INFO     | preparing for final server update for job 7037293983 in state='finished'
[2026-03-12 15:35:22] 2026-03-12 14:34:50,940 | INFO     | reading metadata from: /tmp/job_11300052/atlas/pilot/slots/0/PanDA_Pilot-7037293983/jobReport.json
[2026-03-12 15:35:22] 2026-03-12 14:34:50,941 | INFO     | added worker_node to metadata from /tmp/job_11300052/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 15:35:22] 2026-03-12 14:34:50,941 | INFO     | this job has now completed (state=finished)
[2026-03-12 15:35:22] 2026-03-12 14:34:50,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 15:35:22] 2026-03-12 14:34:50,941 | INFO     | log transfer has been attempted: DONE
[2026-03-12 15:35:22] 2026-03-12 14:34:50,941 | INFO     | job 7037293983 has finished - writing final server update
[2026-03-12 15:35:22] 2026-03-12 14:34:50,941 | INFO     | total number of processed events: 400 (read)
[2026-03-12 15:35:22] 2026-03-12 14:34:50,959 | INFO     | using path: /tmp/job_11300052/atlas/pilot/slots/0/PanDA_Pilot-7037293983/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 15:35:22] 2026-03-12 14:34:50,959 | INFO     | extracted standard info from prmon json
[2026-03-12 15:35:22] 2026-03-12 14:34:50,959 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 15:35:22] 2026-03-12 14:34:50,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | fitting pss+swap vs Time
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | sum of square deviations: 8362947.5
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | sum of deviations: -2761328327.5
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | mean x: 1773325016.5
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | mean y: 2676806.1
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | intersect: 585529801294.9066
[2026-03-12 15:35:22] 2026-03-12 14:34:50,960 | INFO     | chi2: 0.032331159926685664
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | current memory leak: -330.19 B/s (using 30 data points, chi2=0.03)
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | could have reported an average CPU frequency of 2365 MHz (5 samples)
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | ..............................
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . Timing measurements:
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . get job = 0 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . initial setup = 3 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . payload setup = 3 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . stage-in = 0 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . payload execution = 2257 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . stage-out = 0 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | . log creation = 0 s
[2026-03-12 15:35:22] 2026-03-12 14:34:50,961 | INFO     | ..............................
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | 
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | job summary report
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | --------------------------------------------------
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | PanDA job id: 7037293983
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | task id: 48700874
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | errors: (none)
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | pilot state: finished 
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | transexitcode: 0
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | exeerrorcode: 0
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | exeerrordiag: 
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | exitcode: 0
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | exitmsg: OK
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | cpuconsumptiontime: 16476 s
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | nevents: 400
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | neventsw: 0
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | pid: 16293
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | pgrp: 16293
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | corecount: 8
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | event service: False
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | sizes: {0: 2280332, 11: 2280332, 2263: 2305530, 2264: 2305529, 2265: 2314613, 2267: 2314669, 2268: 2315023}
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | --------------------------------------------------
[2026-03-12 15:35:22] 2026-03-12 14:34:51,007 | INFO     | 
[2026-03-12 15:35:22] 2026-03-12 14:34:51,008 | INFO     | executing command: ls -lF /tmp/job_11300052/atlas/pilot/slots/0
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | job 7037293983 has completed (purged errors)
[2026-03-12 15:35:22] 2026-03-12 14:34:51,018 | INFO     | overall cleanup function is called
[2026-03-12 15:35:22] 2026-03-12 14:34:52,024 | INFO     | --- collectZombieJob: --- 10, [16293]
[2026-03-12 15:35:22] 2026-03-12 14:34:52,024 | INFO     | zombie collector waiting for pid 16293
[2026-03-12 15:35:22] 2026-03-12 14:34:52,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 15:35:22] 2026-03-12 14:34:52,024 | INFO     | collected zombie processes
[2026-03-12 15:35:22] 2026-03-12 14:34:52,024 | INFO     | will attempt to kill all subprocesses of pid=16293
[2026-03-12 15:35:22] 2026-03-12 14:34:52,118 | INFO     | process IDs to be killed: [16293] (in reverse order)
[2026-03-12 15:35:22] 2026-03-12 14:34:52,153 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 15:35:22] 2026-03-12 14:34:52,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 15:35:22] 2026-03-12 14:34:52,157 | INFO     | did not find any defunct processes belonging to 16293
[2026-03-12 15:35:22] 2026-03-12 14:34:52,160 | INFO     | did not find any defunct processes belonging to 16293
[2026-03-12 15:35:22] 2026-03-12 14:34:52,160 | INFO     | ready for new job
[2026-03-12 15:35:22] 2026-03-12 14:34:52,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 15:35:22] 2026-03-12 14:34:52,161 | INFO     | **************************************
[2026-03-12 15:35:22] 2026-03-12 14:34:52,161 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 15:35:22] 2026-03-12 14:34:52,161 | INFO     | **************************************
[2026-03-12 15:35:22] 2026-03-12 14:34:52,161 | INFO     | 
[2026-03-12 15:35:22] 2026-03-12 14:34:52,175 | INFO     | architecture information:
[2026-03-12 15:35:22] 2026-03-12 14:34:52,175 | INFO     | executing command: cat /etc/os-release
[2026-03-12 15:35:22] 2026-03-12 14:34:52,181 | INFO     | cat /etc/os-release:
[2026-03-12 15:35:22] NAME="CentOS Linux"
[2026-03-12 15:35:22] VERSION="7 (Core)"
[2026-03-12 15:35:22] ID="centos"
[2026-03-12 15:35:22] ID_LIKE="rhel fedora"
[2026-03-12 15:35:22] VERSION_ID="7"
[2026-03-12 15:35:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 15:35:22] ANSI_COLOR="0;31"
[2026-03-12 15:35:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 15:35:22] HOME_URL="https://www.centos.org/"
[2026-03-12 15:35:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 15:35:22] 
[2026-03-12 15:35:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 15:35:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 15:35:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 15:35:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 15:35:22] 
[2026-03-12 15:35:22] 2026-03-12 14:34:52,181 | INFO     | **************************************
[2026-03-12 15:35:22] 2026-03-12 14:34:52,684 | INFO     | executing command: df -mP /tmp/job_11300052/atlas/pilot/slots/0
[2026-03-12 15:35:22] 2026-03-12 14:34:52,690 | INFO     | sufficient remaining disk space (225138704384 B)
[2026-03-12 15:35:22] 2026-03-12 14:34:52,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 15:35:22] 2026-03-12 14:34:52,691 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 15:35:22] 2026-03-12 14:34:52,691 | INFO     | update_server=False
[2026-03-12 15:35:22] 2026-03-12 14:34:52,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 15:35:22] 2026-03-12 14:34:52,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:35:22] 2026-03-12 14:34:52,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:35:22] 2026-03-12 14:34:52,691 | INFO     | aborting loop
[2026-03-12 15:35:22] 2026-03-12 14:34:53,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 15:35:22] 2026-03-12 14:34:53,384 | INFO     | all job control threads have been joined
[2026-03-12 15:35:22] 2026-03-12 14:34:53,423 | INFO     | all data control threads have been joined
[2026-03-12 15:35:22] 2026-03-12 14:34:53,696 | INFO     | [job] retrieve thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:53,696 | INFO     | [job] queue monitor thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:53,696 | INFO     | [job] job monitor thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:53,951 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,057 | INFO     | all payload control threads have been joined
[2026-03-12 15:35:22] 2026-03-12 14:34:54,339 | INFO     | [job] validate thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,389 | INFO     | [job] control thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,428 | INFO     | [data] control thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,496 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,526 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,609 | INFO     | [monitor] cgroup control has ended
[2026-03-12 15:35:22] 2026-03-12 14:34:54,667 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,758 | INFO     | [payload] failed_post thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:54,821 | INFO     | [data] copytool_in thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:55,062 | INFO     | [payload] control thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:55,258 | INFO     | [data] copytool_out thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:55,286 | INFO     | [payload] validate_post thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:34:55,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 15:35:22] 2026-03-12 14:34:59,911 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 15:35:22] 2026-03-12 14:35:01,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-12 15:35:22] 2026-03-12 14:35:06,956 | INFO     | all workflow threads have been joined
[2026-03-12 15:35:22] 2026-03-12 14:35:06,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 15:35:22] 2026-03-12 14:35:06,956 | INFO     | traces error code: 0
[2026-03-12 15:35:22] 2026-03-12 14:35:06,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 15:35:22] 2026-03-12 14:35:22,652 | INFO     | PID=11735 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 15:35:22] 2026-03-12 14:35:22,652 | INFO     | .. there are 2 such processes running
[2026-03-12 15:35:22] 2026-03-12 14:35:22,652 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 15:35:22] 2026-03-12 14:35:22,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 15:35:22] 2026-03-12 14:35:22,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 15:35:22] 2026-03-12 14:35:22,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 15:35:22] 2026-03-12 14:35:22,653 | INFO     | [monitor] control thread has ended
[2026-03-12 15:35:22] 2026-03-12 14:35:22,708 [wrapper] ==== pilot stdout END ====
[2026-03-12 15:35:22] 2026-03-12 14:35:22,709 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 15:35:22] 2026-03-12 14:35:22,710 [wrapper] pilotpid: 11735
[2026-03-12 15:35:22] 2026-03-12 14:35:22,711 [wrapper] Pilot exit status: 0
[2026-03-12 15:35:22] 2026-03-12 14:35:22,716 [wrapper] pandaids: 7037293983
[2026-03-12 15:35:22] 2026-03-12 14:35:22,736 [wrapper] cleanup supervisor_pilot  7252 11736
[2026-03-12 15:35:22] 2026-03-12 14:35:22,737 [wrapper] Test setup, not cleaning
[2026-03-12 15:35:22] 2026-03-12 14:35:22,739 [wrapper] apfmon messages muted
[2026-03-12 15:35:22] 2026-03-12 14:35:22,740 [wrapper] ==== wrapper stdout END ====
[2026-03-12 15:35:22] 2026-03-12 14:35:22,741 [wrapper] ==== wrapper stderr END ====
[2026-03-12 15:35:22]  *** Error codes and diagnostics ***
[2026-03-12 15:35:22]     "exeErrorCode": 0,
[2026-03-12 15:35:22]     "exeErrorDiag": "",
[2026-03-12 15:35:22]     "pilotErrorCode": 0,
[2026-03-12 15:35:22]     "pilotErrorDiag": "",
[2026-03-12 15:35:22]  *** Listing of results directory ***
[2026-03-12 15:35:22] total 335632
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      5111 Mar  4 08:36 queuedata.json
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user    584627 Mar  4 08:36 pilot3.tar.gz
[2026-03-12 15:35:22] -rwx------ 1 mf493845 unix-user     36322 Mar  4 08:36 runpilot2-wrapper.sh
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       100 Mar 12 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 15:35:22] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 12 14:08 run_atlas
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       105 Mar 12 14:08 job.xml
[2026-03-12 15:35:22] -rw-r--r-- 2 mf493845 unix-user 191257697 Mar 12 14:56 EVNT.48700872._000062.pool.root.1
[2026-03-12 15:35:22] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 14:56 start_atlas.sh
[2026-03-12 15:35:22] drwxrwx--x 2 mf493845 unix-user       100 Mar 12 14:56 shared
[2026-03-12 15:35:22] -rw-r--r-- 2 mf493845 unix-user    597962 Mar 12 14:56 input.tar.gz
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      6391 Mar 12 14:56 init_data.xml
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user         0 Mar 12 14:56 boinc_setup_complete
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      8192 Mar 12 14:56 boinc_mmap_file
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user         0 Mar 12 14:56 boinc_lockfile
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      2550 Mar 12 14:56 pandaJob.out
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user   1006268 Mar 12 14:56 agis_schedconf.cvmfs.json
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user   1511578 Mar 12 14:56 agis_ddmendpoints.agis.ALL.json
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       416 Mar 12 14:56 workernode_map.json
[2026-03-12 15:35:22] drwx------ 5 mf493845 unix-user       440 Mar 12 14:56 pilot3
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user 147203482 Mar 12 15:34 HITS.48700874._001594.pool.root.1
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      1012 Mar 12 15:34 memory_monitor_summary.json
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user    290007 Mar 12 15:34 log.48700874._001594.job.log.tgz.1
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      6306 Mar 12 15:34 heartbeat.json
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       820 Mar 12 15:35 pilotlog.txt
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user        95 Mar 12 15:35 pilot_heartbeat.json
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user    372939 Mar 12 15:35 log.48700874._001594.job.log.1
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       357 Mar 12 15:35 output.list
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       620 Mar 12 15:35 runtime_log
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user    675840 Mar 12 15:35 result.tar.gz
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user      9219 Mar 12 15:35 runtime_log.err
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user       644 Mar 12 15:35 LTfKDmzxvH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQgHLDmBn9FOn.diag
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user     21878 Mar 12 15:35 stderr.txt
[2026-03-12 15:35:22] HITS file was successfully produced:
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user 147203482 Mar 12 15:34 shared/HITS.pool.root.1
[2026-03-12 15:35:22]  *** Contents of shared directory: ***
[2026-03-12 15:35:22] total 331792
[2026-03-12 15:35:22] -rw-r--r-- 2 mf493845 unix-user 191257697 Mar 12 14:56 ATLAS.root_0
[2026-03-12 15:35:22] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 14:56 start_atlas.sh
[2026-03-12 15:35:22] -rw-r--r-- 2 mf493845 unix-user    597962 Mar 12 14:56 input.tar.gz
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user 147203482 Mar 12 15:34 HITS.pool.root.1
[2026-03-12 15:35:22] -rw------- 1 mf493845 unix-user    675840 Mar 12 15:35 result.tar.gz
15:35:23 (7805): run_atlas exited; CPU time 16505.088453
15:35:23 (7805): called boinc_finish(0)

</stderr_txt>
]]>

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