Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:02:31 (486485): wrapper (7.7.26015): starting
13:02:31 (486485): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 13:02:31] Arguments: --nthreads 4
[2026-03-15 13:02:31] Threads: 4
[2026-03-15 13:02:31] Checking for CVMFS
[2026-03-15 13:02:31] No cvmfs_config command found, will try listing directly
[2026-03-15 13:02:31] CVMFS is ok
[2026-03-15 13:02:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 13:02:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 13:02:31] Further information can be found at the LHC@home message board.
[2026-03-15 13:02:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 13:02:31] Checking for apptainer binary...
[2026-03-15 13:02:31] which: no apptainer in ((null))
[2026-03-15 13:02:31] apptainer is not installed, using version from CVMFS
[2026-03-15 13:02:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 13:02:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/14/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-15 13:02:31] apptainer works
[2026-03-15 13:02:31] Set ATHENA_PROC_NUMBER=4
[2026-03-15 13:02:31] Set ATHENA_CORE_NUMBER=4
[2026-03-15 13:02:31] Starting ATLAS job with PandaID=7051746202
[2026-03-15 13:02:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 16:38:25]  *** The last 200 lines of the pilot log: ***
[2026-03-15 16:38:25] 2026-03-15 15:37:24,046 | INFO     | using path: /var/lib/boinc/var/slot80/slots/14/PanDA_Pilot-7051746202/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,047 | INFO     | extracted standard info from prmon json
[2026-03-15 16:38:25] 2026-03-15 15:37:24,047 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 16:38:25] 2026-03-15 15:37:24,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 16:38:25] 2026-03-15 15:37:24,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 16:38:25] 2026-03-15 15:37:24,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 16:38:25] 2026-03-15 15:37:24,052 | INFO     | fitting pss+swap vs Time
[2026-03-15 16:38:25] 2026-03-15 15:37:24,052 | INFO     | sum of square deviations: 2912836010.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,054 | INFO     | sum of deviations: 7014661999.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,054 | INFO     | mean x: 1773582613.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,055 | INFO     | mean y: 2309766.27014218
[2026-03-15 16:38:25] 2026-03-15 15:37:24,055 | INFO     | intersect: -4268813810.4732747
[2026-03-15 16:38:25] 2026-03-15 15:37:24,055 | INFO     | chi2: 2.1497069488451177
[2026-03-15 16:38:25] 2026-03-15 15:37:24,056 | INFO     | sum of square deviations: 2710627567.5
[2026-03-15 16:38:25] 2026-03-15 15:37:24,057 | INFO     | sum of deviations: 19922240039.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,058 | INFO     | mean x: 1773582460.5
[2026-03-15 16:38:25] 2026-03-15 15:37:24,058 | INFO     | mean y: 2319308.0485436893
[2026-03-15 16:38:25] 2026-03-15 15:37:24,058 | INFO     | intersect: -13032940840.076263
[2026-03-15 16:38:25] 2026-03-15 15:37:24,058 | INFO     | chi2: 1.3415211488402994
[2026-03-15 16:38:25] 2026-03-15 15:37:24,058 | INFO     | current chi2=1.3415211488402994 (change=37.595161537669036 %)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,059 | INFO     | sum of square deviations: 2518000700.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,061 | INFO     | sum of deviations: 19289968878.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,061 | INFO     | mean x: 1773582308.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,061 | INFO     | mean y: 2318807.3880597013
[2026-03-15 16:38:25] 2026-03-15 15:37:24,061 | INFO     | intersect: -13584789219.981197
[2026-03-15 16:38:25] 2026-03-15 15:37:24,061 | INFO     | chi2: 1.3423325483350526
[2026-03-15 16:38:25] 2026-03-15 15:37:24,062 | INFO     | current chi2=1.3423325483350526 (change=-0.060483541049993976 %)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,062 | INFO     | right removable region: 200
[2026-03-15 16:38:25] 2026-03-15 15:37:24,062 | INFO     | sum of square deviations: 2710627567.5
[2026-03-15 16:38:25] 2026-03-15 15:37:24,064 | INFO     | sum of deviations: -16761672598.000002
[2026-03-15 16:38:25] 2026-03-15 15:37:24,064 | INFO     | mean x: 1773582765.5
[2026-03-15 16:38:25] 2026-03-15 15:37:24,064 | INFO     | mean y: 2327431.873786408
[2026-03-15 16:38:25] 2026-03-15 15:37:24,064 | INFO     | intersect: 10969608218.50897
[2026-03-15 16:38:25] 2026-03-15 15:37:24,065 | INFO     | chi2: 0.8926319348913188
[2026-03-15 16:38:25] 2026-03-15 15:37:24,065 | INFO     | current chi2=0.8926319348913188 (change=58.47657582486462 %)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,065 | INFO     | sum of square deviations: 2518000700.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,067 | INFO     | sum of deviations: -10774103955.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,067 | INFO     | mean x: 1773582918.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,067 | INFO     | mean y: 2322676.0497512436
[2026-03-15 16:38:25] 2026-03-15 15:37:24,068 | INFO     | intersect: 7591187417.5664
[2026-03-15 16:38:25] 2026-03-15 15:37:24,068 | INFO     | chi2: 0.8616939080356519
[2026-03-15 16:38:25] 2026-03-15 15:37:24,068 | INFO     | current chi2=0.8616939080356519 (change=3.4659332302998593 %)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,068 | INFO     | left removable region: 20
[2026-03-15 16:38:25] 2026-03-15 15:37:24,069 | INFO     | sum of square deviations: 1808350185.0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,070 | INFO     | sum of deviations: 4516582587.5
[2026-03-15 16:38:25] 2026-03-15 15:37:24,070 | INFO     | mean x: 1773582887.5
[2026-03-15 16:38:25] 2026-03-15 15:37:24,070 | INFO     | mean y: 2330295.2722222223
[2026-03-15 16:38:25] 2026-03-15 15:37:24,070 | INFO     | intersect: -4427416583.190077
[2026-03-15 16:38:25] 2026-03-15 15:37:24,071 | INFO     | chi2: 0.00028683127911929027
[2026-03-15 16:38:25] 2026-03-15 15:37:24,071 | INFO     | current memory leak: 2.50 B/s (using 180 data points, chi2=0.00)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,071 | INFO     | could have reported an average CPU frequency of 2695 MHz (11 samples)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | ..............................
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | . Timing measurements:
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | . get job = 0 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | . initial setup = 9 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | . payload setup = 10 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | . stage-in = 0 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,072 | INFO     | . payload execution = 12835 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,073 | INFO     | . stage-out = 1 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,073 | INFO     | . log creation = 0 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,073 | INFO     | ..............................
[2026-03-15 16:38:25] 2026-03-15 15:37:24,186 | INFO     | time since job start (12867s) is within the limit (345600.0s)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,196 | INFO     | 
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | job summary report
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | --------------------------------------------------
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | PanDA job id: 7051746202
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | task id: 48967094
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | errors: (none)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 16:38:25] 2026-03-15 15:37:24,197 | INFO     | pilot state: finished 
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | transexitcode: 0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | exeerrorcode: 0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | exeerrordiag: 
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | exitcode: 0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | exitmsg: OK
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | cpuconsumptiontime: 48912 s
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | nevents: 400
[2026-03-15 16:38:25] 2026-03-15 15:37:24,198 | INFO     | neventsw: 0
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | pid: 496500
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | pgrp: 496500
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | corecount: 4
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | event service: False
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | sizes: {0: 2279134, 1: 2280264, 12: 2280264, 12849: 2310659, 12850: 2310658, 12851: 2319736, 12853: 2319920, 12855: 2320114}
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | --------------------------------------------------
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | 
[2026-03-15 16:38:25] 2026-03-15 15:37:24,199 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/14
[2026-03-15 16:38:25] 2026-03-15 15:37:24,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,282 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,282 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 16:38:25] 2026-03-15 15:37:24,282 | INFO     | job 7051746202 has completed (purged errors)
[2026-03-15 16:38:25] 2026-03-15 15:37:24,282 | INFO     | overall cleanup function is called
[2026-03-15 16:38:25] 2026-03-15 15:37:25,292 | INFO     | --- collectZombieJob: --- 10, [496500]
[2026-03-15 16:38:25] 2026-03-15 15:37:25,292 | INFO     | zombie collector waiting for pid 496500
[2026-03-15 16:38:25] 2026-03-15 15:37:25,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 16:38:25] 2026-03-15 15:37:25,293 | INFO     | collected zombie processes
[2026-03-15 16:38:25] 2026-03-15 15:37:25,293 | INFO     | will attempt to kill all subprocesses of pid=496500
[2026-03-15 16:38:25] 2026-03-15 15:37:26,409 | INFO     | process IDs to be killed: [496500] (in reverse order)
[2026-03-15 16:38:25] 2026-03-15 15:37:26,819 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 16:38:25] 2026-03-15 15:37:26,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 16:38:25] 2026-03-15 15:37:26,860 | INFO     | did not find any defunct processes belonging to 496500
[2026-03-15 16:38:25] 2026-03-15 15:37:26,896 | INFO     | did not find any defunct processes belonging to 496500
[2026-03-15 16:38:25] 2026-03-15 15:37:26,897 | INFO     | ready for new job
[2026-03-15 16:38:25] 2026-03-15 15:37:26,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 16:38:25] 2026-03-15 15:37:26,901 | INFO     | **************************************
[2026-03-15 16:38:25] 2026-03-15 15:37:26,901 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 16:38:25] 2026-03-15 15:37:26,901 | INFO     | **************************************
[2026-03-15 16:38:25] 2026-03-15 15:37:26,901 | INFO     | 
[2026-03-15 16:38:25] 2026-03-15 15:37:26,912 | INFO     | architecture information:
[2026-03-15 16:38:25] 2026-03-15 15:37:26,913 | INFO     | executing command: cat /etc/os-release
[2026-03-15 16:38:25] 2026-03-15 15:37:26,940 | INFO     | cat /etc/os-release:
[2026-03-15 16:38:25] NAME="CentOS Linux"
[2026-03-15 16:38:25] VERSION="7 (Core)"
[2026-03-15 16:38:25] ID="centos"
[2026-03-15 16:38:25] ID_LIKE="rhel fedora"
[2026-03-15 16:38:25] VERSION_ID="7"
[2026-03-15 16:38:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 16:38:25] ANSI_COLOR="0;31"
[2026-03-15 16:38:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 16:38:25] HOME_URL="https://www.centos.org/"
[2026-03-15 16:38:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 16:38:25] 
[2026-03-15 16:38:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 16:38:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 16:38:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 16:38:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 16:38:25] 
[2026-03-15 16:38:25] 2026-03-15 15:37:26,941 | INFO     | **************************************
[2026-03-15 16:38:25] 2026-03-15 15:37:27,443 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/14
[2026-03-15 16:38:25] 2026-03-15 15:37:27,475 | INFO     | sufficient remaining disk space (177652891648 B)
[2026-03-15 16:38:25] 2026-03-15 15:37:27,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 16:38:25] 2026-03-15 15:37:27,476 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 16:38:25] 2026-03-15 15:37:27,476 | INFO     | update_server=False
[2026-03-15 16:38:25] 2026-03-15 15:37:27,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 16:38:25] 2026-03-15 15:37:27,527 | INFO     | all payload control threads have been joined
[2026-03-15 16:38:25] 2026-03-15 15:37:27,919 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 16:38:25] 2026-03-15 15:37:27,919 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 16:38:25] 2026-03-15 15:37:27,920 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:38:25] 2026-03-15 15:37:27,920 | INFO     | will abort loop
[2026-03-15 16:38:25] 2026-03-15 15:37:28,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 16:38:25] 2026-03-15 15:37:28,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 16:38:25] 2026-03-15 15:37:28,428 | INFO     | all data control threads have been joined
[2026-03-15 16:38:25] 2026-03-15 15:37:28,481 | INFO     | [job] retrieve thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:28,532 | INFO     | [payload] control thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:28,910 | INFO     | all job control threads have been joined
[2026-03-15 16:38:25] 2026-03-15 15:37:28,925 | INFO     | [job] job monitor thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:28,928 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:28,961 | INFO     | [data] copytool_in thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:29,153 | INFO     | [payload] validate_post thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:29,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:38:25] 2026-03-15 15:37:29,428 | INFO     | [job] validate thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:29,433 | INFO     | [data] control thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:29,787 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:29,915 | INFO     | [job] control thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:29,927 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:30,038 | INFO     | [payload] failed_post thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:30,189 | INFO     | [data] copytool_out thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:30,211 | INFO     | [job] queue monitor thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:32,028 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:38,041 | INFO     | job.realtimelogging is not enabled
[2026-03-15 16:38:25] 2026-03-15 15:37:39,046 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 16:38:25] 2026-03-15 15:37:58,547 | INFO     | PID=490853 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 16:38:25] 2026-03-15 15:37:58,547 | INFO     | .. there are 24 such processes running
[2026-03-15 16:38:25] 2026-03-15 15:37:58,547 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 16:38:25] 2026-03-15 15:37:58,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 16:38:25] 2026-03-15 15:37:58,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 16:38:25] 2026-03-15 15:38:18,317 | INFO     | [monitor] cgroup control has ended
[2026-03-15 16:38:25] 2026-03-15 15:38:20,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23172928591680)>', '<ExcThread(monitor, started 23172619425536)>']
[2026-03-15 16:38:25] 2026-03-15 15:38:20,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 16:38:25] 2026-03-15 15:38:20,656 | INFO     | [monitor] control thread has ended
[2026-03-15 16:38:25] 2026-03-15 15:38:25,147 | INFO     | all workflow threads have been joined
[2026-03-15 16:38:25] 2026-03-15 15:38:25,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 16:38:25] 2026-03-15 15:38:25,148 | INFO     | traces error code: 0
[2026-03-15 16:38:25] 2026-03-15 15:38:25,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 16:38:25] 2026-03-15 15:38:25,318 [wrapper] ==== pilot stdout END ====
[2026-03-15 16:38:25] 2026-03-15 15:38:25,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 16:38:25] 2026-03-15 15:38:25,329 [wrapper] pilotpid: 490853
[2026-03-15 16:38:25] 2026-03-15 15:38:25,334 [wrapper] Pilot exit status: 0
[2026-03-15 16:38:25] 2026-03-15 15:38:25,362 [wrapper] pandaids: 7051746202
[2026-03-15 16:38:25] 2026-03-15 15:38:25,636 [wrapper] cleanup supervisor_pilot 1008102 490854
[2026-03-15 16:38:25] 2026-03-15 15:38:25,642 [wrapper] Test setup, not cleaning
[2026-03-15 16:38:25] 2026-03-15 15:38:25,647 [wrapper] apfmon messages muted
[2026-03-15 16:38:25] 2026-03-15 15:38:25,651 [wrapper] ==== wrapper stdout END ====
[2026-03-15 16:38:25] 2026-03-15 15:38:25,655 [wrapper] ==== wrapper stderr END ====
[2026-03-15 16:38:25]  *** Error codes and diagnostics ***
[2026-03-15 16:38:25]     "exeErrorCode": 0,
[2026-03-15 16:38:25]     "exeErrorDiag": "",
[2026-03-15 16:38:25]     "pilotErrorCode": 0,
[2026-03-15 16:38:25]     "pilotErrorDiag": "",
[2026-03-15 16:38:25]  *** Listing of results directory ***
[2026-03-15 16:38:25] total 427184
[2026-03-15 16:38:25] -rwx------. 1 boinc boinc     36322 Mar 12 13:11 runpilot2-wrapper.sh
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc    585013 Mar 12 13:11 pilot3.tar.gz
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc      5111 Mar 12 13:11 queuedata.json
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc       100 Mar 15 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 16:38:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 13:02 run_atlas
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc       105 Mar 15 13:02 job.xml
[2026-03-15 16:38:25] -rw-r--r--. 2 boinc boinc 221232674 Mar 15 13:02 EVNT.48967092._000300.pool.root.1
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc      6695 Mar 15 13:02 init_data.xml
[2026-03-15 16:38:25] -rw-r--r--. 2 boinc boinc     15845 Mar 15 13:02 start_atlas.sh
[2026-03-15 16:38:25] drwxrwx--x. 2 boinc boinc      4096 Mar 15 13:02 shared
[2026-03-15 16:38:25] -rw-r--r--. 2 boinc boinc    597529 Mar 15 13:02 input.tar.gz
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc         0 Mar 15 13:02 boinc_lockfile
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc      2597 Mar 15 13:02 pandaJob.out
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc   1006481 Mar 15 13:02 agis_schedconf.cvmfs.json
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc       443 Mar 15 13:02 workernode_map.json
[2026-03-15 16:38:25] drwx------. 5 boinc boinc      4096 Mar 15 13:02 pilot3
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc 207965884 Mar 15 16:36 HITS.48967094._007339.pool.root.1
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc       530 Mar 15 16:36 boinc_task_state.xml
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc        95 Mar 15 16:37 pilot_heartbeat.json
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc      1026 Mar 15 16:37 memory_monitor_summary.json
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc   1511579 Mar 15 16:37 agis_ddmendpoints.agis.ALL.json
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc    379044 Mar 15 16:37 log.48967094._007339.job.log.tgz.1
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc      6349 Mar 15 16:37 heartbeat.json
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc      8192 Mar 15 16:38 boinc_mmap_file
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc        28 Mar 15 16:38 wrapper_checkpoint.txt
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc      5088 Mar 15 16:38 pilotlog.txt
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc   1774314 Mar 15 16:38 log.48967094._007339.job.log.1
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc       357 Mar 15 16:38 output.list
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc       620 Mar 15 16:38 runtime_log
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc   2170880 Mar 15 16:38 result.tar.gz
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc      9222 Mar 15 16:38 runtime_log.err
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc       666 Mar 15 16:38 QbELDmp3tK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHkmLDmYfZmqm.diag
[2026-03-15 16:38:25] -rw-r--r--. 1 boinc boinc     20848 Mar 15 16:38 stderr.txt
[2026-03-15 16:38:25] HITS file was successfully produced:
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc 207965884 Mar 15 16:36 shared/HITS.pool.root.1
[2026-03-15 16:38:25]  *** Contents of shared directory: ***
[2026-03-15 16:38:25] total 421864
[2026-03-15 16:38:25] -rw-r--r--. 2 boinc boinc 221232674 Mar 15 13:02 ATLAS.root_0
[2026-03-15 16:38:25] -rw-r--r--. 2 boinc boinc     15845 Mar 15 13:02 start_atlas.sh
[2026-03-15 16:38:25] -rw-r--r--. 2 boinc boinc    597529 Mar 15 13:02 input.tar.gz
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc 207965884 Mar 15 16:36 HITS.pool.root.1
[2026-03-15 16:38:25] -rw-------. 1 boinc boinc   2170880 Mar 15 16:38 result.tar.gz
16:38:26 (486485): run_atlas exited; CPU time 49741.573558
16:38:26 (486485): called boinc_finish(0)

</stderr_txt>
]]>

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