Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:54:33 (19813): wrapper (7.7.26015): starting
14:54:33 (19813): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 14:54:33] Arguments: --nthreads 8
[2026-03-12 14:54:33] Threads: 8
[2026-03-12 14:54:33] Checking for CVMFS
[2026-03-12 14:54:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 14:54:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 14:54:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 14:54:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 14:54:33] 2.11.0.0 4219 218241 71224 157202 3 188 3653521 4096000 917 130560 5 6477158 99.419 9742995 350 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-12 14:54:33] CVMFS is ok
[2026-03-12 14:54:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 14:54:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 14:54:33] Further information can be found at the LHC@home message board.
[2026-03-12 14:54:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 14:54:33] Checking for apptainer binary...
[2026-03-12 14:54:33] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-12 14:54:33] apptainer is not installed, using version from CVMFS
[2026-03-12 14:54:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 14:54:34] WARNING: Environment variable TMPDIR already has value [/tmp/job_11299905/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node305
[2026-03-12 14:54:34] apptainer works
[2026-03-12 14:54:34] Set ATHENA_PROC_NUMBER=8
[2026-03-12 14:54:34] Set ATHENA_CORE_NUMBER=8
[2026-03-12 14:54:34] Starting ATLAS job with PandaID=7050630595
[2026-03-12 14:54:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11299905/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 15:52:51]  *** The last 200 lines of the pilot log: ***
[2026-03-12 15:52:51]  lfn=log.48967085._012930.job.log.tgz.1
[2026-03-12 15:52:51]  mtime=0
[2026-03-12 15:52:51]  protocol_id=None
[2026-03-12 15:52:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 15:52:51]  replicas=None
[2026-03-12 15:52:51]  scope=mc23_13p6TeV
[2026-03-12 15:52:51]  status=None
[2026-03-12 15:52:51]  status_code=0
[2026-03-12 15:52:51]  storage_token=
[2026-03-12 15:52:51]  surl=/tmp/job_11299905/atlas/pilot/slots/0/PanDA_Pilot-7050630595/log.48967085._012930.job.log.tgz.1
[2026-03-12 15:52:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/34/log.48967085._012930.job.log.tgz.1
[2026-03-12 15:52:51]  workdir=None
[2026-03-12 15:52:51] ]
[2026-03-12 15:52:51] 2026-03-12 14:52:20,144 | INFO     | transferring file log.48967085._012930.job.log.tgz.1 from /tmp/job_11299905/atlas/pilot/slots/0/PanDA_Pilot-7050630595/log.48967085._012930.job.log.tgz.1 to /tmp/j
[2026-03-12 15:52:51] 2026-03-12 14:52:20,144 | INFO     | executing command: /usr/bin/env mv /tmp/job_11299905/atlas/pilot/slots/0/PanDA_Pilot-7050630595/log.48967085._012930.job.log.tgz.1 /tmp/job_11299905/atlas/pilot/sl
[2026-03-12 15:52:51] 2026-03-12 14:52:20,154 | INFO     | adding to output.list: log.48967085._012930.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/34/log.48967085._012930.job.log.tg
[2026-03-12 15:52:51] 2026-03-12 14:52:20,154 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 15:52:51] 2026-03-12 14:52:20,154 | INFO     | summary of transferred files:
[2026-03-12 15:52:51] 2026-03-12 14:52:20,154 | INFO     |  -- lfn=log.48967085._012930.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 15:52:51] 2026-03-12 14:52:20,154 | INFO     | stage-out finished correctly
[2026-03-12 15:52:51] 2026-03-12 14:52:21,210 | INFO     | time since job start (3461s) is within the limit (345600.0s)
[2026-03-12 15:52:51] 2026-03-12 14:52:22,443 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 15:52:51] 2026-03-12 14:52:23,215 | INFO     | time since job start (3463s) is within the limit (345600.0s)
[2026-03-12 15:52:51] 2026-03-12 14:52:24,588 | INFO     | job 7050630595 has state=finished
[2026-03-12 15:52:51] 2026-03-12 14:52:24,588 | INFO     | preparing for final server update for job 7050630595 in state='finished'
[2026-03-12 15:52:51] 2026-03-12 14:52:25,161 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,161 | INFO     | reading metadata from: /tmp/job_11299905/atlas/pilot/slots/0/PanDA_Pilot-7050630595/jobReport.json
[2026-03-12 15:52:51] 2026-03-12 14:52:25,163 | INFO     | added worker_node to metadata from /tmp/job_11299905/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 15:52:51] 2026-03-12 14:52:25,163 | INFO     | this job has now completed (state=finished)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,163 | INFO     | log transfer has been attempted: DONE
[2026-03-12 15:52:51] 2026-03-12 14:52:25,163 | INFO     | job 7050630595 has finished - writing final server update
[2026-03-12 15:52:51] 2026-03-12 14:52:25,163 | INFO     | total number of processed events: 400 (read)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,180 | INFO     | using path: /tmp/job_11299905/atlas/pilot/slots/0/PanDA_Pilot-7050630595/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,181 | INFO     | extracted standard info from prmon json
[2026-03-12 15:52:51] 2026-03-12 14:52:25,181 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 15:52:51] 2026-03-12 14:52:25,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 15:52:51] 2026-03-12 14:52:25,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 15:52:51] 2026-03-12 14:52:25,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | fitting pss+swap vs Time
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | sum of square deviations: 38744912.5
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | sum of deviations: -2566616785.0000005
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | mean x: 1773325495.5
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | mean y: 2604104.76
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | intersect: 117474723367.35333
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | chi2: 0.026052730931981943
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | current memory leak: -66.24 B/s (using 50 data points, chi2=0.03)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,182 | INFO     | could have reported an average CPU frequency of 2485 MHz (5 samples)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | ..............................
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . Timing measurements:
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . get job = 0 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . initial setup = 2 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . payload setup = 2 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . stage-in = 0 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . payload execution = 3442 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . stage-out = 0 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | . log creation = 0 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,183 | INFO     | ..............................
[2026-03-12 15:52:51] 2026-03-12 14:52:25,223 | INFO     | time since job start (3465s) is within the limit (345600.0s)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,522 | WARNING  | process 30073 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 15:52:51] 2026-03-12 14:52:25,522 | INFO     | using path: /tmp/job_11299905/atlas/pilot/slots/0/PanDA_Pilot-7050630595/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,593 | INFO     | 
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | job summary report
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | --------------------------------------------------
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | PanDA job id: 7050630595
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | task id: 48967085
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | errors: (none)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | pilot state: finished 
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | transexitcode: 0
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | exeerrorcode: 0
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | exeerrordiag: 
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | exitcode: 0
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | exitmsg: OK
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | cpuconsumptiontime: 23486 s
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | nevents: 400
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | neventsw: 0
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | pid: 30073
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | pgrp: 30073
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | corecount: 8
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | event service: False
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | sizes: {0: 2279871, 1: 2280386, 11: 2280386, 3448: 2306203, 3449: 2315231, 3451: 2315287, 3454: 2315641}
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | --------------------------------------------------
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | 
[2026-03-12 15:52:51] 2026-03-12 14:52:25,594 | INFO     | executing command: ls -lF /tmp/job_11299905/atlas/pilot/slots/0
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | job 7050630595 has completed (purged errors)
[2026-03-12 15:52:51] 2026-03-12 14:52:25,607 | INFO     | overall cleanup function is called
[2026-03-12 15:52:51] 2026-03-12 14:52:25,620 | INFO     | number of running child processes to parent process 30073: 1
[2026-03-12 15:52:51] 2026-03-12 14:52:25,620 | INFO     | maximum number of monitored processes: 6
[2026-03-12 15:52:51] 2026-03-12 14:52:25,620 | INFO     | aborting job monitoring since job object (job id=7050630595) has expired
[2026-03-12 15:52:51] 2026-03-12 14:52:26,362 | INFO     | PID=24471 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 15:52:51] 2026-03-12 14:52:26,362 | INFO     | .. there are 2 such processes running
[2026-03-12 15:52:51] 2026-03-12 14:52:26,614 | INFO     | --- collectZombieJob: --- 10, [30073]
[2026-03-12 15:52:51] 2026-03-12 14:52:26,614 | INFO     | zombie collector waiting for pid 30073
[2026-03-12 15:52:51] 2026-03-12 14:52:26,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 15:52:51] 2026-03-12 14:52:26,614 | INFO     | collected zombie processes
[2026-03-12 15:52:51] 2026-03-12 14:52:26,614 | INFO     | will attempt to kill all subprocesses of pid=30073
[2026-03-12 15:52:51] 2026-03-12 14:52:26,712 | INFO     | process IDs to be killed: [30073] (in reverse order)
[2026-03-12 15:52:51] 2026-03-12 14:52:26,745 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 15:52:51] 2026-03-12 14:52:26,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 15:52:51] 2026-03-12 14:52:26,749 | INFO     | did not find any defunct processes belonging to 30073
[2026-03-12 15:52:51] 2026-03-12 14:52:26,752 | INFO     | did not find any defunct processes belonging to 30073
[2026-03-12 15:52:51] 2026-03-12 14:52:26,752 | INFO     | ready for new job
[2026-03-12 15:52:51] 2026-03-12 14:52:26,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 15:52:51] 2026-03-12 14:52:26,753 | INFO     | **************************************
[2026-03-12 15:52:51] 2026-03-12 14:52:26,753 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 15:52:51] 2026-03-12 14:52:26,753 | INFO     | **************************************
[2026-03-12 15:52:51] 2026-03-12 14:52:26,753 | INFO     | 
[2026-03-12 15:52:51] 2026-03-12 14:52:26,767 | INFO     | architecture information:
[2026-03-12 15:52:51] 2026-03-12 14:52:26,767 | INFO     | executing command: cat /etc/os-release
[2026-03-12 15:52:51] 2026-03-12 14:52:26,773 | INFO     | cat /etc/os-release:
[2026-03-12 15:52:51] NAME="CentOS Linux"
[2026-03-12 15:52:51] VERSION="7 (Core)"
[2026-03-12 15:52:51] ID="centos"
[2026-03-12 15:52:51] ID_LIKE="rhel fedora"
[2026-03-12 15:52:51] VERSION_ID="7"
[2026-03-12 15:52:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 15:52:51] ANSI_COLOR="0;31"
[2026-03-12 15:52:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 15:52:51] HOME_URL="https://www.centos.org/"
[2026-03-12 15:52:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 15:52:51] 
[2026-03-12 15:52:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 15:52:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 15:52:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 15:52:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 15:52:51] 
[2026-03-12 15:52:51] 2026-03-12 14:52:26,773 | INFO     | **************************************
[2026-03-12 15:52:51] 2026-03-12 14:52:27,276 | INFO     | executing command: df -mP /tmp/job_11299905/atlas/pilot/slots/0
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | INFO     | sufficient remaining disk space (224330252288 B)
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | INFO     | update_server=False
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-12 15:52:51] 2026-03-12 14:52:27,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:52:51] 2026-03-12 14:52:27,282 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 15:52:51] 2026-03-12 14:52:27,282 | INFO     | aborting loop
[2026-03-12 15:52:51] 2026-03-12 14:52:27,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 15:52:51] 2026-03-12 14:52:27,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 15:52:51] 2026-03-12 14:52:28,156 | INFO     | all data control threads have been joined
[2026-03-12 15:52:51] 2026-03-12 14:52:28,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 15:52:51] 2026-03-12 14:52:28,286 | INFO     | [job] retrieve thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:28,287 | INFO     | [job] job monitor thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:28,288 | INFO     | [job] validate thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:28,289 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:28,374 | INFO     | all job control threads have been joined
[2026-03-12 15:52:51] 2026-03-12 14:52:28,384 | INFO     | [data] copytool_in thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:28,471 | INFO     | all payload control threads have been joined
[2026-03-12 15:52:51] 2026-03-12 14:52:28,488 | INFO     | [payload] validate_post thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:28,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 15:52:51] 2026-03-12 14:52:28,815 | INFO     | [payload] failed_post thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:29,162 | INFO     | [data] control thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:29,379 | INFO     | [job] control thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:29,449 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:29,476 | INFO     | [payload] control thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:29,484 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:29,608 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:30,236 | INFO     | [data] copytool_out thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:30,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:52:51] 2026-03-12 14:52:31,251 | INFO     | [job] queue monitor thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:32,506 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 15:52:51] 2026-03-12 14:52:45,988 | INFO     | [monitor] cgroup control has ended
[2026-03-12 15:52:51] 2026-03-12 14:52:46,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456052684544)>']
[2026-03-12 15:52:51] 2026-03-12 14:52:46,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 15:52:51] 2026-03-12 14:52:46,378 | INFO     | [monitor] control thread has ended
[2026-03-12 15:52:51] 2026-03-12 14:52:51,271 | INFO     | all workflow threads have been joined
[2026-03-12 15:52:51] 2026-03-12 14:52:51,271 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 15:52:51] 2026-03-12 14:52:51,272 | INFO     | traces error code: 0
[2026-03-12 15:52:51] 2026-03-12 14:52:51,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 15:52:51] 2026-03-12 14:52:51,344 [wrapper] ==== pilot stdout END ====
[2026-03-12 15:52:51] 2026-03-12 14:52:51,345 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 15:52:51] 2026-03-12 14:52:51,346 [wrapper] pilotpid: 24471
[2026-03-12 15:52:51] 2026-03-12 14:52:51,347 [wrapper] Pilot exit status: 0
[2026-03-12 15:52:51] 2026-03-12 14:52:51,352 [wrapper] pandaids: 7050630595
[2026-03-12 15:52:51] 2026-03-12 14:52:51,374 [wrapper] cleanup supervisor_pilot 16999 24472
[2026-03-12 15:52:51] 2026-03-12 14:52:51,375 [wrapper] Test setup, not cleaning
[2026-03-12 15:52:51] 2026-03-12 14:52:51,377 [wrapper] apfmon messages muted
[2026-03-12 15:52:51] 2026-03-12 14:52:51,377 [wrapper] ==== wrapper stdout END ====
[2026-03-12 15:52:51] 2026-03-12 14:52:51,378 [wrapper] ==== wrapper stderr END ====
[2026-03-12 15:52:51]  *** Error codes and diagnostics ***
[2026-03-12 15:52:51]     "exeErrorCode": 0,
[2026-03-12 15:52:51]     "exeErrorDiag": "",
[2026-03-12 15:52:51]     "pilotErrorCode": 0,
[2026-03-12 15:52:51]     "pilotErrorDiag": "",
[2026-03-12 15:52:51]  *** Listing of results directory ***
[2026-03-12 15:52:51] total 404380
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      5111 Mar 12 02:25 queuedata.json
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user    585013 Mar 12 02:25 pilot3.tar.gz
[2026-03-12 15:52:51] -rwx------ 1 mf493845 unix-user     36322 Mar 12 02:25 runpilot2-wrapper.sh
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user       100 Mar 12 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 15:52:51] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 12 14:00 run_atlas
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user       105 Mar 12 14:00 job.xml
[2026-03-12 15:52:51] -rw-r--r-- 2 mf493845 unix-user 210326412 Mar 12 14:54 EVNT.48967083._000019.pool.root.1
[2026-03-12 15:52:51] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 14:54 start_atlas.sh
[2026-03-12 15:52:51] drwxrwx--x 2 mf493845 unix-user       100 Mar 12 14:54 shared
[2026-03-12 15:52:51] -rw-r--r-- 2 mf493845 unix-user    597519 Mar 12 14:54 input.tar.gz
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      6390 Mar 12 14:54 init_data.xml
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user         0 Mar 12 14:54 boinc_setup_complete
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      8192 Mar 12 14:54 boinc_mmap_file
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user         0 Mar 12 14:54 boinc_lockfile
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      2558 Mar 12 14:54 pandaJob.out
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user   1006268 Mar 12 14:54 agis_schedconf.cvmfs.json
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user   1511578 Mar 12 14:54 agis_ddmendpoints.agis.ALL.json
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user       416 Mar 12 14:54 workernode_map.json
[2026-03-12 15:52:51] drwx------ 5 mf493845 unix-user       440 Mar 12 14:54 pilot3
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user 198138276 Mar 12 15:51 HITS.48967085._012930.pool.root.1
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user        95 Mar 12 15:52 pilot_heartbeat.json
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      1016 Mar 12 15:52 memory_monitor_summary.json
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user    317038 Mar 12 15:52 log.48967085._012930.job.log.tgz.1
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      6310 Mar 12 15:52 heartbeat.json
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      4562 Mar 12 15:52 pilotlog.txt
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user    537594 Mar 12 15:52 log.48967085._012930.job.log.1
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user       357 Mar 12 15:52 output.list
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user       620 Mar 12 15:52 runtime_log
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user    870400 Mar 12 15:52 result.tar.gz
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user      9219 Mar 12 15:52 runtime_log.err
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user       642 Mar 12 15:52 B1yKDmtyjK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcalLDmSp55Mo.diag
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user     22225 Mar 12 15:52 stderr.txt
[2026-03-12 15:52:51] HITS file was successfully produced:
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user 198138276 Mar 12 15:51 shared/HITS.pool.root.1
[2026-03-12 15:52:51]  *** Contents of shared directory: ***
[2026-03-12 15:52:51] total 400348
[2026-03-12 15:52:51] -rw-r--r-- 2 mf493845 unix-user 210326412 Mar 12 14:54 ATLAS.root_0
[2026-03-12 15:52:51] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 14:54 start_atlas.sh
[2026-03-12 15:52:51] -rw-r--r-- 2 mf493845 unix-user    597519 Mar 12 14:54 input.tar.gz
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user 198138276 Mar 12 15:51 HITS.pool.root.1
[2026-03-12 15:52:51] -rw------- 1 mf493845 unix-user    870400 Mar 12 15:52 result.tar.gz
15:52:52 (19813): run_atlas exited; CPU time 23529.634925
15:52:52 (19813): called boinc_finish(0)

</stderr_txt>
]]>

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