Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:51 (1188257): wrapper (7.7.26015): starting
11:46:51 (1188257): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 11:46:51] Arguments: --nthreads 4
[2026-03-14 11:46:51] Threads: 4
[2026-03-14 11:46:51] Checking for CVMFS
[2026-03-14 11:46:51] No cvmfs_config command found, will try listing directly
[2026-03-14 11:46:51] CVMFS is ok
[2026-03-14 11:46:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 11:46:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 11:46:51] Further information can be found at the LHC@home message board.
[2026-03-14 11:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 11:46:51] Checking for apptainer binary...
[2026-03-14 11:46:51] which: no apptainer in ((null))
[2026-03-14 11:46:51] apptainer is not installed, using version from CVMFS
[2026-03-14 11:46:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 11:46:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot240/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-14 11:46:51] apptainer works
[2026-03-14 11:46:51] Set ATHENA_PROC_NUMBER=4
[2026-03-14 11:46:51] Set ATHENA_CORE_NUMBER=4
[2026-03-14 11:46:51] Starting ATLAS job with PandaID=7050586739
[2026-03-14 11:46:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot240/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:26:21]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:26:21]  guid=7a9f4908-8f19-4f45-82fe-679cbf66ef61
[2026-03-14 13:26:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 13:26:21]  is_altstaged=None
[2026-03-14 13:26:21]  is_tar=False
[2026-03-14 13:26:21]  lfn=log.48967085._012897.job.log.tgz.1
[2026-03-14 13:26:21]  mtime=0
[2026-03-14 13:26:21]  protocol_id=None
[2026-03-14 13:26:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 13:26:21]  replicas=None
[2026-03-14 13:26:21]  scope=mc23_13p6TeV
[2026-03-14 13:26:21]  status=None
[2026-03-14 13:26:21]  status_code=0
[2026-03-14 13:26:21]  storage_token=
[2026-03-14 13:26:21]  surl=/var/lib/boinc/var/slot240/slots/0/PanDA_Pilot-7050586739/log.48967085._012897.job.log.tgz.1
[2026-03-14 13:26:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/6e/log.48967085._012897.job.log.tgz.1
[2026-03-14 13:26:21]  workdir=None
[2026-03-14 13:26:21] ]
[2026-03-14 13:26:21] 2026-03-14 12:25:24,550 | INFO     | transferring file log.48967085._012897.job.log.tgz.1 from /var/lib/boinc/var/slot240/slots/0/PanDA_Pilot-7050586739/log.48967085._012897.job.log.tgz.1 to /var/lib/
[2026-03-14 13:26:21] 2026-03-14 12:25:24,550 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot240/slots/0/PanDA_Pilot-7050586739/log.48967085._012897.job.log.tgz.1 /var/lib/boinc/var/slot240/slots/0/
[2026-03-14 13:26:21] 2026-03-14 12:25:24,563 | INFO     | adding to output.list: log.48967085._012897.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/6e/log.48967085._012897.job.log.tg
[2026-03-14 13:26:21] 2026-03-14 12:25:24,564 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 13:26:21] 2026-03-14 12:25:24,564 | INFO     | summary of transferred files:
[2026-03-14 13:26:21] 2026-03-14 12:25:24,564 | INFO     |  -- lfn=log.48967085._012897.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 13:26:21] 2026-03-14 12:25:24,564 | INFO     | stage-out finished correctly
[2026-03-14 13:26:21] 2026-03-14 12:25:24,985 | INFO     | time since job start (5900s) is within the limit (345600.0s)
[2026-03-14 13:26:21] 2026-03-14 12:25:25,698 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 13:26:21] 2026-03-14 12:25:26,190 | INFO     | monitor loop #425: job 0:7050586739 is in state 'finished'
[2026-03-14 13:26:21] 2026-03-14 12:25:26,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 13:26:21] 2026-03-14 12:25:26,990 | INFO     | time since job start (5902s) is within the limit (345600.0s)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,260 | INFO     | job 7050586739 has state=finished
[2026-03-14 13:26:21] 2026-03-14 12:25:27,260 | INFO     | preparing for final server update for job 7050586739 in state='finished'
[2026-03-14 13:26:21] 2026-03-14 12:25:27,260 | INFO     | reading metadata from: /var/lib/boinc/var/slot240/slots/0/PanDA_Pilot-7050586739/jobReport.json
[2026-03-14 13:26:21] 2026-03-14 12:25:27,261 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot240/slots/0/workernode_map.json
[2026-03-14 13:26:21] 2026-03-14 12:25:27,262 | INFO     | this job has now completed (state=finished)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,262 | INFO     | log transfer has been attempted: DONE
[2026-03-14 13:26:21] 2026-03-14 12:25:27,262 | INFO     | job 7050586739 has finished - writing final server update
[2026-03-14 13:26:21] 2026-03-14 12:25:27,262 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2836980/.job.ad'
[2026-03-14 13:26:21] 2026-03-14 12:25:27,262 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,279 | INFO     | using path: /var/lib/boinc/var/slot240/slots/0/PanDA_Pilot-7050586739/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,280 | INFO     | extracted standard info from prmon json
[2026-03-14 13:26:21] 2026-03-14 12:25:27,280 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:26:21] 2026-03-14 12:25:27,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:26:21] 2026-03-14 12:25:27,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:26:21] 2026-03-14 12:25:27,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:26:21] 2026-03-14 12:25:27,281 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:26:21] 2026-03-14 12:25:27,281 | INFO     | sum of square deviations: 226022842.5
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | sum of deviations: 55138906.49999999
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | mean x: 1773488264.5
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | mean y: 2336106.6333333333
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | intersect: -430311330.7384569
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | chi2: 0.0006589721158002925
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | current memory leak: 0.24 B/s (using 90 data points, chi2=0.00)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | could have reported an average CPU frequency of 3573 MHz (7 samples)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | ..............................
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . Timing measurements:
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . get job = 0 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . initial setup = 5 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . payload setup = 5 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . stage-in = 0 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . payload execution = 5879 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . stage-out = 0 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | . log creation = 0 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,282 | INFO     | ..............................
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | 
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | job summary report
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | --------------------------------------------------
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | PanDA job id: 7050586739
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | task id: 48967085
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | errors: (none)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | pilot state: finished 
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | transexitcode: 0
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | exeerrorcode: 0
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | exeerrordiag: 
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | exitcode: 0
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | exitmsg: OK
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | cpuconsumptiontime: 22717 s
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | nevents: 400
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | neventsw: 0
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | pid: 1199677
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | pgrp: 1199677
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | corecount: 4
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | event service: False
[2026-03-14 13:26:21] 2026-03-14 12:25:27,332 | INFO     | sizes: {0: 2279815, 1: 2280276, 11: 2280276, 5888: 2307036, 5889: 2316113, 5890: 2316113, 5892: 2316435}
[2026-03-14 13:26:21] 2026-03-14 12:25:27,333 | INFO     | --------------------------------------------------
[2026-03-14 13:26:21] 2026-03-14 12:25:27,333 | INFO     | 
[2026-03-14 13:26:21] 2026-03-14 12:25:27,333 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot240/slots/0
[2026-03-14 13:26:21] 2026-03-14 12:25:27,352 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:26:21] 2026-03-14 12:25:27,357 | INFO     | job 7050586739 has completed (purged errors)
[2026-03-14 13:26:21] 2026-03-14 12:25:27,357 | INFO     | overall cleanup function is called
[2026-03-14 13:26:21] 2026-03-14 12:25:28,364 | INFO     | --- collectZombieJob: --- 10, [1199677]
[2026-03-14 13:26:21] 2026-03-14 12:25:28,364 | INFO     | zombie collector waiting for pid 1199677
[2026-03-14 13:26:21] 2026-03-14 12:25:28,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:26:21] 2026-03-14 12:25:28,364 | INFO     | collected zombie processes
[2026-03-14 13:26:21] 2026-03-14 12:25:28,364 | INFO     | will attempt to kill all subprocesses of pid=1199677
[2026-03-14 13:26:21] 2026-03-14 12:25:28,856 | INFO     | process IDs to be killed: [1199677] (in reverse order)
[2026-03-14 13:26:21] 2026-03-14 12:25:29,102 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:26:21] 2026-03-14 12:25:29,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:26:21] 2026-03-14 12:25:29,131 | INFO     | did not find any defunct processes belonging to 1199677
[2026-03-14 13:26:21] 2026-03-14 12:25:29,158 | INFO     | did not find any defunct processes belonging to 1199677
[2026-03-14 13:26:21] 2026-03-14 12:25:29,158 | INFO     | ready for new job
[2026-03-14 13:26:21] 2026-03-14 12:25:29,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:26:21] 2026-03-14 12:25:29,159 | INFO     | **************************************
[2026-03-14 13:26:21] 2026-03-14 12:25:29,159 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:26:21] 2026-03-14 12:25:29,160 | INFO     | **************************************
[2026-03-14 13:26:21] 2026-03-14 12:25:29,160 | INFO     | 
[2026-03-14 13:26:21] 2026-03-14 12:25:29,165 | INFO     | architecture information:
[2026-03-14 13:26:21] 2026-03-14 12:25:29,165 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:26:21] 2026-03-14 12:25:29,176 | INFO     | cat /etc/os-release:
[2026-03-14 13:26:21] NAME="CentOS Linux"
[2026-03-14 13:26:21] VERSION="7 (Core)"
[2026-03-14 13:26:21] ID="centos"
[2026-03-14 13:26:21] ID_LIKE="rhel fedora"
[2026-03-14 13:26:21] VERSION_ID="7"
[2026-03-14 13:26:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:26:21] ANSI_COLOR="0;31"
[2026-03-14 13:26:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:26:21] HOME_URL="https://www.centos.org/"
[2026-03-14 13:26:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:26:21] 
[2026-03-14 13:26:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:26:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:26:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:26:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:26:21] 
[2026-03-14 13:26:21] 2026-03-14 12:25:29,176 | INFO     | **************************************
[2026-03-14 13:26:21] 2026-03-14 12:25:29,679 | INFO     | executing command: df -mP /var/lib/boinc/var/slot240/slots/0
[2026-03-14 13:26:21] 2026-03-14 12:25:29,695 | INFO     | sufficient remaining disk space (21265121280 B)
[2026-03-14 13:26:21] 2026-03-14 12:25:29,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:26:21] 2026-03-14 12:25:29,696 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:26:21] 2026-03-14 12:25:29,696 | INFO     | update_server=False
[2026-03-14 13:26:21] 2026-03-14 12:25:29,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:26:21] 2026-03-14 12:25:29,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:26:21] 2026-03-14 12:25:29,698 | INFO     | aborting loop
[2026-03-14 13:26:21] 2026-03-14 12:25:30,057 | INFO     | all job control threads have been joined
[2026-03-14 13:26:21] 2026-03-14 12:25:30,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:26:21] 2026-03-14 12:25:30,169 | INFO     | job.realtimelogging is not enabled
[2026-03-14 13:26:21] 2026-03-14 12:25:30,207 | INFO     | all data control threads have been joined
[2026-03-14 13:26:21] 2026-03-14 12:25:30,392 | INFO     | all payload control threads have been joined
[2026-03-14 13:26:21] 2026-03-14 12:25:30,701 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:30,701 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:30,962 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,062 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,063 | INFO     | [job] control thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,143 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,174 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,185 | INFO     | [job] validate thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,213 | INFO     | [data] control thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,269 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,398 | INFO     | [payload] control thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,542 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:31,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:26:21] 2026-03-14 12:25:32,126 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:32,127 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:32,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:26:21] 2026-03-14 12:25:33,346 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:25:35,757 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:26:21] 2026-03-14 12:26:00,556 | INFO     | PID=1192837 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 13:26:21] 2026-03-14 12:26:00,556 | INFO     | .. there are 47 such processes running
[2026-03-14 13:26:21] 2026-03-14 12:26:00,556 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:26:21] 2026-03-14 12:26:00,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:26:21] 2026-03-14 12:26:00,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:26:21] 2026-03-14 12:26:13,874 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:26:21] 2026-03-14 12:26:15,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23369493923648)>', '<ExcThread(monitor, started 23369179186944)>']
[2026-03-14 13:26:21] 2026-03-14 12:26:16,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:26:21] 2026-03-14 12:26:16,637 | INFO     | [monitor] control thread has ended
[2026-03-14 13:26:21] 2026-03-14 12:26:20,692 | INFO     | all workflow threads have been joined
[2026-03-14 13:26:21] 2026-03-14 12:26:20,692 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:26:21] 2026-03-14 12:26:20,692 | INFO     | traces error code: 0
[2026-03-14 13:26:21] 2026-03-14 12:26:20,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:26:21] 2026-03-14 12:26:20,817 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:26:21] 2026-03-14 12:26:20,820 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:26:21] 2026-03-14 12:26:20,822 [wrapper] pilotpid: 1192837
[2026-03-14 13:26:21] 2026-03-14 12:26:20,825 [wrapper] Pilot exit status: 0
[2026-03-14 13:26:21] 2026-03-14 12:26:20,835 [wrapper] pandaids: 7050586739
[2026-03-14 13:26:21] 2026-03-14 12:26:20,975 [wrapper] cleanup supervisor_pilot 1878095 1192838
[2026-03-14 13:26:21] 2026-03-14 12:26:20,979 [wrapper] Test setup, not cleaning
[2026-03-14 13:26:21] 2026-03-14 12:26:20,982 [wrapper] apfmon messages muted
[2026-03-14 13:26:21] 2026-03-14 12:26:20,985 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:26:21] 2026-03-14 12:26:20,987 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:26:21]  *** Error codes and diagnostics ***
[2026-03-14 13:26:21]     "exeErrorCode": 0,
[2026-03-14 13:26:21]     "exeErrorDiag": "",
[2026-03-14 13:26:21]     "pilotErrorCode": 0,
[2026-03-14 13:26:21]     "pilotErrorDiag": "",
[2026-03-14 13:26:21]  *** Listing of results directory ***
[2026-03-14 13:26:21] total 409860
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc      5111 Mar 12 02:25 queuedata.json
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc    585013 Mar 12 02:25 pilot3.tar.gz
[2026-03-14 13:26:21] -rwx------. 1 boinc boinc     36322 Mar 12 02:25 runpilot2-wrapper.sh
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc       100 Mar 14 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:26:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 11:46 run_atlas
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc       105 Mar 14 11:46 job.xml
[2026-03-14 13:26:21] -rw-r--r--. 2 boinc boinc 215290889 Mar 14 11:46 EVNT.48967083._000531.pool.root.1
[2026-03-14 13:26:21] -rw-r--r--. 2 boinc boinc     15845 Mar 14 11:46 start_atlas.sh
[2026-03-14 13:26:21] drwxrwx--x. 2 boinc boinc      4096 Mar 14 11:46 shared
[2026-03-14 13:26:21] -rw-r--r--. 2 boinc boinc    597515 Mar 14 11:46 input.tar.gz
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc      6709 Mar 14 11:46 init_data.xml
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc         0 Mar 14 11:46 boinc_lockfile
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc      2560 Mar 14 11:46 pandaJob.out
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc   1004579 Mar 14 11:46 agis_schedconf.cvmfs.json
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc   1511579 Mar 14 11:46 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc       445 Mar 14 11:47 workernode_map.json
[2026-03-14 13:26:21] drwx------. 5 boinc boinc      4096 Mar 14 11:47 pilot3
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc       529 Mar 14 13:24 boinc_task_state.xml
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc 198222414 Mar 14 13:24 HITS.48967085._012897.pool.root.1
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc      1030 Mar 14 13:25 memory_monitor_summary.json
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc    269652 Mar 14 13:25 log.48967085._012897.job.log.tgz.1
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc      6351 Mar 14 13:25 heartbeat.json
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc        95 Mar 14 13:26 pilot_heartbeat.json
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc      8192 Mar 14 13:26 boinc_mmap_file
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc        27 Mar 14 13:26 wrapper_checkpoint.txt
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc      4902 Mar 14 13:26 pilotlog.txt
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc    852291 Mar 14 13:26 log.48967085._012897.job.log.1
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc       357 Mar 14 13:26 output.list
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc       620 Mar 14 13:26 runtime_log
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc   1136640 Mar 14 13:26 result.tar.gz
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc      9221 Mar 14 13:26 runtime_log.err
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc       663 Mar 14 13:26 oBJKDmtyjK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCalLDms1uTPm.diag
[2026-03-14 13:26:21] -rw-r--r--. 1 boinc boinc     21251 Mar 14 13:26 stderr.txt
[2026-03-14 13:26:21] HITS file was successfully produced:
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc 198222414 Mar 14 13:24 shared/HITS.pool.root.1
[2026-03-14 13:26:21]  *** Contents of shared directory: ***
[2026-03-14 13:26:21] total 405548
[2026-03-14 13:26:21] -rw-r--r--. 2 boinc boinc 215290889 Mar 14 11:46 ATLAS.root_0
[2026-03-14 13:26:21] -rw-r--r--. 2 boinc boinc     15845 Mar 14 11:46 start_atlas.sh
[2026-03-14 13:26:21] -rw-r--r--. 2 boinc boinc    597515 Mar 14 11:46 input.tar.gz
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc 198222414 Mar 14 13:24 HITS.pool.root.1
[2026-03-14 13:26:21] -rw-------. 1 boinc boinc   1136640 Mar 14 13:26 result.tar.gz
13:26:22 (1188257): run_atlas exited; CPU time 22985.222359
13:26:22 (1188257): called boinc_finish(0)

</stderr_txt>
]]>

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