Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:44 (1312073): wrapper (7.7.26015): starting
10:31:44 (1312073): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 10:31:44] Arguments: --nthreads 8
[2026-03-12 10:31:44] Threads: 8
[2026-03-12 10:31:44] Checking for CVMFS
[2026-03-12 10:31:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 10:31:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 10:31:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 10:31:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 10:31:46] 2.13.3.0 6592 103392 348820 157203 0 497 35525905 40960000 26941 16776704 0 192292360 99.725 148100018 36063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 10:31:46] CVMFS is ok
[2026-03-12 10:31:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 10:31:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 10:31:46] Further information can be found at the LHC@home message board.
[2026-03-12 10:31:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 10:31:46] Checking for apptainer binary...
[2026-03-12 10:31:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 10:31:46] Running /usr/bin/apptainer --version
[2026-03-12 10:31:46] apptainer version 1.4.5-2.el9
[2026-03-12 10:31:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 10:31:47] c-211-35-2.aglt2.org
[2026-03-12 10:31:47] apptainer works
[2026-03-12 10:31:47] Set ATHENA_PROC_NUMBER=8
[2026-03-12 10:31:47] Set ATHENA_CORE_NUMBER=8
[2026-03-12 10:31:47] Starting ATLAS job with PandaID=7037294613
[2026-03-12 10:31:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 13:31:21]  *** The last 200 lines of the pilot log: ***
[2026-03-12 13:31:21] 2026-03-12 17:30:30,119 | INFO     | time since job start (10596s) is within the limit (349056.0s)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,555 | INFO     | job 7037294613 has state=finished
[2026-03-12 13:31:21] 2026-03-12 17:30:30,555 | INFO     | preparing for final server update for job 7037294613 in state='finished'
[2026-03-12 13:31:21] 2026-03-12 17:30:30,555 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037294613/jobReport.json
[2026-03-12 13:31:21] 2026-03-12 17:30:30,557 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 13:31:21] 2026-03-12 17:30:30,558 | INFO     | this job has now completed (state=finished)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,558 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,558 | INFO     | log transfer has been attempted: DONE
[2026-03-12 13:31:21] 2026-03-12 17:30:30,558 | INFO     | job 7037294613 has finished - writing final server update
[2026-03-12 13:31:21] 2026-03-12 17:30:30,558 | INFO     | total number of processed events: 400 (read)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,683 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037294613/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,684 | INFO     | extracted standard info from prmon json
[2026-03-12 13:31:21] 2026-03-12 17:30:30,684 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 13:31:21] 2026-03-12 17:30:30,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 13:31:21] 2026-03-12 17:30:30,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 13:31:21] 2026-03-12 17:30:30,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 13:31:21] 2026-03-12 17:30:30,692 | INFO     | fitting pss+swap vs Time
[2026-03-12 13:31:21] 2026-03-12 17:30:30,714 | INFO     | sum of square deviations: 1577676674.4651165
[2026-03-12 13:31:21] 2026-03-12 17:30:30,715 | INFO     | sum of deviations: 17828111733.62789
[2026-03-12 13:31:21] 2026-03-12 17:30:30,715 | INFO     | mean x: 1773331346.7906976
[2026-03-12 13:31:21] 2026-03-12 17:30:30,715 | INFO     | mean y: 2465057.5174418604
[2026-03-12 13:31:21] 2026-03-12 17:30:30,715 | INFO     | intersect: -20036589777.370037
[2026-03-12 13:31:21] 2026-03-12 17:30:30,716 | INFO     | chi2: 4.579077581985579
[2026-03-12 13:31:21] 2026-03-12 17:30:30,716 | INFO     | sum of square deviations: 1444052209.029936
[2026-03-12 13:31:21] 2026-03-12 17:30:30,717 | INFO     | sum of deviations: 28746539912.113773
[2026-03-12 13:31:21] 2026-03-12 17:30:30,717 | INFO     | mean x: 1773331194.2994013
[2026-03-12 13:31:21] 2026-03-12 17:30:30,717 | INFO     | mean y: 2477213.137724551
[2026-03-12 13:31:21] 2026-03-12 17:30:30,717 | INFO     | intersect: -35298972163.52213
[2026-03-12 13:31:21] 2026-03-12 17:30:30,738 | INFO     | chi2: 3.8498177579440016
[2026-03-12 13:31:21] 2026-03-12 17:30:30,738 | INFO     | current chi2=3.8498177579440016 (change=15.925911081099342 %)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,738 | INFO     | right removable region: 166
[2026-03-12 13:31:21] 2026-03-12 17:30:30,738 | INFO     | sum of square deviations: 1444021709.029936
[2026-03-12 13:31:21] 2026-03-12 17:30:30,739 | INFO     | sum of deviations: -29768254959.856285
[2026-03-12 13:31:21] 2026-03-12 17:30:30,739 | INFO     | mean x: 1773331499.2994013
[2026-03-12 13:31:21] 2026-03-12 17:30:30,739 | INFO     | mean y: 2519175.4371257485
[2026-03-12 13:31:21] 2026-03-12 17:30:30,740 | INFO     | intersect: 36559437862.58853
[2026-03-12 13:31:21] 2026-03-12 17:30:30,740 | INFO     | chi2: 1.4242488339134822
[2026-03-12 13:31:21] 2026-03-12 17:30:30,740 | INFO     | current chi2=1.4242488339134822 (change=68.89659962267118 %)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,740 | INFO     | sum of square deviations: 1318144517.679012
[2026-03-12 13:31:21] 2026-03-12 17:30:30,741 | INFO     | sum of deviations: -42502775808.12346
[2026-03-12 13:31:21] 2026-03-12 17:30:30,741 | INFO     | mean x: 1773331651.8024693
[2026-03-12 13:31:21] 2026-03-12 17:30:30,741 | INFO     | mean y: 2534479.3086419753
[2026-03-12 13:31:21] 2026-03-12 17:30:30,741 | INFO     | intersect: 57182545183.08466
[2026-03-12 13:31:21] 2026-03-12 17:30:30,764 | INFO     | chi2: 1.0878084894450268
[2026-03-12 13:31:21] 2026-03-12 17:30:30,764 | INFO     | current chi2=1.0878084894450268 (change=23.62230085483032 %)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,764 | INFO     | left removable region: 20
[2026-03-12 13:31:21] 2026-03-12 17:30:30,765 | INFO     | sum of square deviations: 964915159.5410993
[2026-03-12 13:31:21] 2026-03-12 17:30:30,765 | INFO     | sum of deviations: -23881728826.97259
[2026-03-12 13:31:21] 2026-03-12 17:30:30,766 | INFO     | mean x: 1773331773.7739725
[2026-03-12 13:31:21] 2026-03-12 17:30:30,766 | INFO     | mean y: 2540367.8493150687
[2026-03-12 13:31:21] 2026-03-12 17:30:30,766 | INFO     | intersect: 43892646272.7721
[2026-03-12 13:31:21] 2026-03-12 17:30:30,766 | INFO     | chi2: 0.25052915994229913
[2026-03-12 13:31:21] 2026-03-12 17:30:30,766 | INFO     | current memory leak: -24.75 B/s (using 146 data points, chi2=0.25)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | could have reported an average CPU frequency of 2682 MHz (9 samples)
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | ..............................
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | . Timing measurements:
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | . get job = 0 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | . initial setup = 42 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | . payload setup = 52 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | . stage-in = 0 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,767 | INFO     | . payload execution = 10517 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,790 | INFO     | . stage-out = 3 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,790 | INFO     | . log creation = 0 s
[2026-03-12 13:31:21] 2026-03-12 17:30:30,790 | INFO     | ..............................
[2026-03-12 13:31:21] 2026-03-12 17:30:31,318 | INFO     | 
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | job summary report
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | --------------------------------------------------
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | PanDA job id: 7037294613
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | task id: 48700874
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | errors: (none)
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | pilot state: finished 
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | transexitcode: 0
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | exeerrorcode: 0
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | exeerrordiag: 
[2026-03-12 13:31:21] 2026-03-12 17:30:31,319 | INFO     | exitcode: 0
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | exitmsg: OK
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | cpuconsumptiontime: 30517 s
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | nevents: 400
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | neventsw: 0
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | pid: 1327578
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | pgrp: 1327578
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | corecount: 8
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | event service: False
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | sizes: {0: 2279116, 1: 2279801, 2: 2279829, 3: 2280262, 13: 2280290, 10574: 2309116, 10578: 2318114, 10582: 2318170, 10583: 2318428}
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | --------------------------------------------------
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | 
[2026-03-12 13:31:21] 2026-03-12 17:30:31,320 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 13:31:21] 2026-03-12 17:30:31,453 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,453 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,453 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,453 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 13:31:21] 2026-03-12 17:30:31,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,455 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 13:31:21] 2026-03-12 17:30:31,455 | INFO     | job 7037294613 has completed (purged errors)
[2026-03-12 13:31:21] 2026-03-12 17:30:31,455 | INFO     | overall cleanup function is called
[2026-03-12 13:31:21] 2026-03-12 17:30:32,488 | INFO     | --- collectZombieJob: --- 10, [1327578]
[2026-03-12 13:31:21] 2026-03-12 17:30:32,488 | INFO     | zombie collector waiting for pid 1327578
[2026-03-12 13:31:21] 2026-03-12 17:30:32,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 13:31:21] 2026-03-12 17:30:32,488 | INFO     | collected zombie processes
[2026-03-12 13:31:21] 2026-03-12 17:30:32,488 | INFO     | will attempt to kill all subprocesses of pid=1327578
[2026-03-12 13:31:21] 2026-03-12 17:30:33,811 | INFO     | process IDs to be killed: [1327578] (in reverse order)
[2026-03-12 13:31:21] 2026-03-12 17:30:34,091 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 13:31:21] 2026-03-12 17:30:34,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 13:31:21] 2026-03-12 17:30:34,124 | INFO     | did not find any defunct processes belonging to 1327578
[2026-03-12 13:31:21] 2026-03-12 17:30:34,156 | INFO     | did not find any defunct processes belonging to 1327578
[2026-03-12 13:31:21] 2026-03-12 17:30:34,156 | INFO     | ready for new job
[2026-03-12 13:31:21] 2026-03-12 17:30:34,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 13:31:21] 2026-03-12 17:30:34,163 | INFO     | **************************************
[2026-03-12 13:31:21] 2026-03-12 17:30:34,163 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 13:31:21] 2026-03-12 17:30:34,163 | INFO     | **************************************
[2026-03-12 13:31:21] 2026-03-12 17:30:34,163 | INFO     | 
[2026-03-12 13:31:21] 2026-03-12 17:30:34,173 | INFO     | architecture information:
[2026-03-12 13:31:21] 2026-03-12 17:30:34,177 | INFO     | executing command: cat /etc/os-release
[2026-03-12 13:31:21] 2026-03-12 17:30:34,287 | INFO     | cat /etc/os-release:
[2026-03-12 13:31:21] NAME="CentOS Linux"
[2026-03-12 13:31:21] VERSION="7 (Core)"
[2026-03-12 13:31:21] ID="centos"
[2026-03-12 13:31:21] ID_LIKE="rhel fedora"
[2026-03-12 13:31:21] VERSION_ID="7"
[2026-03-12 13:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 13:31:21] ANSI_COLOR="0;31"
[2026-03-12 13:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 13:31:21] HOME_URL="https://www.centos.org/"
[2026-03-12 13:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 13:31:21] 
[2026-03-12 13:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 13:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 13:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 13:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 13:31:21] 
[2026-03-12 13:31:21] 2026-03-12 17:30:34,287 | INFO     | **************************************
[2026-03-12 13:31:21] 2026-03-12 17:30:34,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 13:31:21] 2026-03-12 17:30:34,887 | INFO     | sufficient remaining disk space (127540396032 B)
[2026-03-12 13:31:21] 2026-03-12 17:30:34,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 13:31:21] 2026-03-12 17:30:34,887 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 13:31:21] 2026-03-12 17:30:34,888 | INFO     | update_server=False
[2026-03-12 13:31:21] 2026-03-12 17:30:34,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 13:31:21] 2026-03-12 17:30:34,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 13:31:21] 2026-03-12 17:30:35,162 | INFO     | all job control threads have been joined
[2026-03-12 13:31:21] 2026-03-12 17:30:35,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:31:21] 2026-03-12 17:30:35,177 | INFO     | aborting loop
[2026-03-12 13:31:21] 2026-03-12 17:30:35,452 | INFO     | all data control threads have been joined
[2026-03-12 13:31:21] 2026-03-12 17:30:35,607 | INFO     | all payload control threads have been joined
[2026-03-12 13:31:21] 2026-03-12 17:30:35,896 | INFO     | [job] retrieve thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,165 | INFO     | [data] copytool_in thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,167 | INFO     | [job] control thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,182 | INFO     | [job] job monitor thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,196 | INFO     | [payload] failed_post thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,250 | INFO     | [job] validate thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,291 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,295 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:31:21] 2026-03-12 17:30:36,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 13:31:21] 2026-03-12 17:30:36,468 | INFO     | [data] control thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,613 | INFO     | [payload] control thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,666 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:36,919 | INFO     | [data] copytool_out thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:37,168 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:37,303 | INFO     | [payload] validate_post thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:37,339 | INFO     | [job] queue monitor thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:30:40,419 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 13:31:21] 2026-03-12 17:31:02,183 | INFO     | 10640s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-12 13:31:21] 2026-03-12 17:31:04,082 | INFO     | PID=1316686 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 13:31:21] 2026-03-12 17:31:04,082 | INFO     | .. there are 31 such processes running
[2026-03-12 13:31:21] 2026-03-12 17:31:04,083 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 13:31:21] 2026-03-12 17:31:04,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 13:31:21] 2026-03-12 17:31:04,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 13:31:21] 2026-03-12 17:31:12,678 | INFO     | [monitor] cgroup control has ended
[2026-03-12 13:31:21] 2026-03-12 17:31:14,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021344089920)>', '<ExcThread(monitor, started 140020857939712)>']
[2026-03-12 13:31:21] 2026-03-12 17:31:15,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 13:31:21] 2026-03-12 17:31:15,150 | INFO     | [monitor] control thread has ended
[2026-03-12 13:31:21] 2026-03-12 17:31:19,604 | INFO     | all workflow threads have been joined
[2026-03-12 13:31:21] 2026-03-12 17:31:19,604 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 13:31:21] 2026-03-12 17:31:19,604 | INFO     | traces error code: 0
[2026-03-12 13:31:21] 2026-03-12 17:31:19,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 13:31:21] 2026-03-12 17:31:20,010 [wrapper] ==== pilot stdout END ====
[2026-03-12 13:31:21] 2026-03-12 17:31:20,033 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 13:31:21] 2026-03-12 17:31:20,058 [wrapper] pilotpid: 1316686
[2026-03-12 13:31:21] 2026-03-12 17:31:20,082 [wrapper] Pilot exit status: 0
[2026-03-12 13:31:21] 2026-03-12 17:31:20,172 [wrapper] pandaids: 7037294613
[2026-03-12 13:31:21] 2026-03-12 17:31:20,490 [wrapper] cleanup supervisor_pilot 1760139 1316687
[2026-03-12 13:31:21] 2026-03-12 17:31:20,505 [wrapper] Test setup, not cleaning
[2026-03-12 13:31:21] 2026-03-12 17:31:20,539 [wrapper] apfmon messages muted
[2026-03-12 13:31:21] 2026-03-12 17:31:20,557 [wrapper] ==== wrapper stdout END ====
[2026-03-12 13:31:21] 2026-03-12 17:31:20,584 [wrapper] ==== wrapper stderr END ====
[2026-03-12 13:31:21]  *** Error codes and diagnostics ***
[2026-03-12 13:31:21]     "exeErrorCode": 0,
[2026-03-12 13:31:21]     "exeErrorDiag": "",
[2026-03-12 13:31:21]     "pilotErrorCode": 0,
[2026-03-12 13:31:21]     "pilotErrorDiag": "",
[2026-03-12 13:31:21]  *** Listing of results directory ***
[2026-03-12 13:31:21] total 333100
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 02:36 pilot3.tar.gz
[2026-03-12 13:31:21] -rwx------. 1 boincer umatlas     36322 Mar  4 02:39 runpilot2-wrapper.sh
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 02:42 queuedata.json
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas       100 Mar 12 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 13:31:21] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 10:31 run_atlas
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas       105 Mar 12 10:31 job.xml
[2026-03-12 13:31:21] -rw-r--r--. 2 boincer umatlas 188989428 Mar 12 10:31 EVNT.48700872._000069.pool.root.1
[2026-03-12 13:31:21] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 10:31 start_atlas.sh
[2026-03-12 13:31:21] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 10:31 shared
[2026-03-12 13:31:21] -rw-r--r--. 2 boincer umatlas    597954 Mar 12 10:31 input.tar.gz
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas         0 Mar 12 10:31 boinc_lockfile
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas      2550 Mar 12 10:31 pandaJob.out
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas        57 Mar 12 10:31 setup.sh.local
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas   1006554 Mar 12 10:33 agis_schedconf.cvmfs.json
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas   1511578 Mar 12 10:33 agis_ddmendpoints.agis.ALL.json
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas       443 Mar 12 10:33 workernode_map.json
[2026-03-12 13:31:21] drwx------. 5 boincer umatlas      4096 Mar 12 10:33 pilot3
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas 144656867 Mar 12 13:29 HITS.48700874._001768.pool.root.1
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas       531 Mar 12 13:29 boinc_task_state.xml
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas      6861 Mar 12 13:29 init_data.xml
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas      1045 Mar 12 13:30 memory_monitor_summary.json
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas    399415 Mar 12 13:30 log.48700874._001768.job.log.tgz.1
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas      6401 Mar 12 13:30 heartbeat.json
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas        95 Mar 12 13:31 pilot_heartbeat.json
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas      4937 Mar 12 13:31 pilotlog.txt
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas        28 Mar 12 13:31 wrapper_checkpoint.txt
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 13:31 boinc_mmap_file
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas   1355801 Mar 12 13:31 log.48700874._001768.job.log.1
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas       357 Mar 12 13:31 output.list
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas       620 Mar 12 13:31 runtime_log
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas   1771520 Mar 12 13:31 result.tar.gz
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas      9352 Mar 12 13:31 runtime_log.err
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas       657 Mar 12 13:31 pNILDmv0vH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6jJLDmFMF1Xm.diag
[2026-03-12 13:31:21] -rw-r--r--. 1 boincer umatlas     21381 Mar 12 13:31 stderr.txt
[2026-03-12 13:31:21] HITS file was successfully produced:
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas 144656867 Mar 12 13:29 shared/HITS.pool.root.1
[2026-03-12 13:31:21]  *** Contents of shared directory: ***
[2026-03-12 13:31:21] total 328164
[2026-03-12 13:31:21] -rw-r--r--. 2 boincer umatlas 188989428 Mar 12 10:31 ATLAS.root_0
[2026-03-12 13:31:21] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 10:31 start_atlas.sh
[2026-03-12 13:31:21] -rw-r--r--. 2 boincer umatlas    597954 Mar 12 10:31 input.tar.gz
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas 144656867 Mar 12 13:29 HITS.pool.root.1
[2026-03-12 13:31:21] -rw-------. 1 boincer umatlas   1771520 Mar 12 13:31 result.tar.gz
13:31:22 (1312073): run_atlas exited; CPU time 30991.988658
13:31:22 (1312073): called boinc_finish(0)

</stderr_txt>
]]>

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