Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:25:00 (2589279): wrapper (7.7.26015): starting
18:25:00 (2589279): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 18:25:00] Arguments: --nthreads 4
[2026-03-14 18:25:00] Threads: 4
[2026-03-14 18:25:00] Checking for CVMFS
[2026-03-14 18:25:00] No cvmfs_config command found, will try listing directly
[2026-03-14 18:25:00] CVMFS is ok
[2026-03-14 18:25:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:25:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:25:00] Further information can be found at the LHC@home message board.
[2026-03-14 18:25:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:25:00] Checking for apptainer binary...
[2026-03-14 18:25:00] which: no apptainer in ((null))
[2026-03-14 18:25:00] apptainer is not installed, using version from CVMFS
[2026-03-14 18:25:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:25:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot232/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-14 18:25:00] apptainer works
[2026-03-14 18:25:00] Set ATHENA_PROC_NUMBER=4
[2026-03-14 18:25:00] Set ATHENA_CORE_NUMBER=4
[2026-03-14 18:25:00] Starting ATLAS job with PandaID=7051676997
[2026-03-14 18:25:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot232/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 21:28:40]  *** The last 200 lines of the pilot log: ***
[2026-03-14 21:28:40] 2026-03-14 20:27:54,866 | INFO     | mean y: 2315406.2555555557
[2026-03-14 21:28:40] 2026-03-14 20:27:54,866 | INFO     | intersect: -7236762829.931071
[2026-03-14 21:28:40] 2026-03-14 20:27:54,866 | INFO     | chi2: 1.913299881093985
[2026-03-14 21:28:40] 2026-03-14 20:27:54,866 | INFO     | sum of square deviations: 1661798600.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | sum of deviations: 18338887499.999996
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | mean x: 1773514448.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | mean y: 2326541.285714286
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | intersect: -19569408530.27867
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | chi2: 1.098363970428112
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | current chi2=1.098363970428112 (change=42.593213887616486 %)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,867 | INFO     | sum of square deviations: 1523386702.5
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | sum of deviations: 17660277201.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | mean x: 1773514295.5
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | mean y: 2325793.294117647
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | intersect: -20557623973.2795
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | chi2: 1.099072136615138
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | current chi2=1.099072136615138 (change=-0.06447463737815667 %)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | right removable region: 169
[2026-03-14 21:28:40] 2026-03-14 20:27:54,868 | INFO     | sum of square deviations: 1661798600.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | sum of deviations: -9920519914.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | mean x: 1773514753.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | mean y: 2333086.9485714287
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | intersect: 10589770352.155855
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | chi2: 0.8344957879229081
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | current chi2=0.8344957879229081 (change=56.38447500212247 %)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,869 | INFO     | sum of square deviations: 1523386702.5
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | sum of deviations: -9983382122.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | mean x: 1773514905.5
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | mean y: 2333156.105882353
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | intersect: 11624908679.190586
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | chi2: 0.8347853807380292
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | current chi2=0.8347853807380292 (change=-0.034702729398058976 %)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | left removable region: 20
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | sum of square deviations: 1025693650.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | sum of deviations: 512415066.99999994
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | mean x: 1773514875.0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,870 | INFO     | mean y: 2345419.4966442953
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | intersect: -883665470.3032696
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | chi2: 0.00012098345308139685
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | current memory leak: 0.50 B/s (using 149 data points, chi2=0.00)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | could have reported an average CPU frequency of 3514 MHz (10 samples)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | ..............................
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . Timing measurements:
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . get job = 0 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . initial setup = 5 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . payload setup = 7 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . stage-in = 0 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . payload execution = 10935 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . stage-out = 0 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | . log creation = 0 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,871 | INFO     | ..............................
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | 
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | job summary report
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | --------------------------------------------------
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | PanDA job id: 7051676997
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | task id: 48967059
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | errors: (none)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | pilot state: finished 
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | transexitcode: 0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | exeerrorcode: 0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | exeerrordiag: 
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | exitcode: 0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | exitmsg: OK
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | cpuconsumptiontime: 42316 s
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | nevents: 400
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | neventsw: 0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | pid: 2619749
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | pgrp: 2619749
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | corecount: 4
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | event service: False
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | sizes: {0: 2280167, 1: 2280227, 11: 2280255, 10947: 2309436, 10948: 2318458, 10949: 2318836}
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | --------------------------------------------------
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | 
[2026-03-14 21:28:40] 2026-03-14 20:27:54,921 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot232/slots/0
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | job 7051676997 has completed (purged errors)
[2026-03-14 21:28:40] 2026-03-14 20:27:54,939 | INFO     | overall cleanup function is called
[2026-03-14 21:28:40] 2026-03-14 20:27:55,946 | INFO     | --- collectZombieJob: --- 10, [2619749]
[2026-03-14 21:28:40] 2026-03-14 20:27:55,946 | INFO     | zombie collector waiting for pid 2619749
[2026-03-14 21:28:40] 2026-03-14 20:27:55,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 21:28:40] 2026-03-14 20:27:55,947 | INFO     | collected zombie processes
[2026-03-14 21:28:40] 2026-03-14 20:27:55,947 | INFO     | will attempt to kill all subprocesses of pid=2619749
[2026-03-14 21:28:40] 2026-03-14 20:27:56,435 | INFO     | process IDs to be killed: [2619749] (in reverse order)
[2026-03-14 21:28:40] 2026-03-14 20:27:56,673 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 21:28:40] 2026-03-14 20:27:56,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 21:28:40] 2026-03-14 20:27:56,704 | INFO     | did not find any defunct processes belonging to 2619749
[2026-03-14 21:28:40] 2026-03-14 20:27:56,733 | INFO     | did not find any defunct processes belonging to 2619749
[2026-03-14 21:28:40] 2026-03-14 20:27:56,733 | INFO     | ready for new job
[2026-03-14 21:28:40] 2026-03-14 20:27:56,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 21:28:40] 2026-03-14 20:27:56,735 | INFO     | **************************************
[2026-03-14 21:28:40] 2026-03-14 20:27:56,735 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 21:28:40] 2026-03-14 20:27:56,735 | INFO     | **************************************
[2026-03-14 21:28:40] 2026-03-14 20:27:56,735 | INFO     | 
[2026-03-14 21:28:40] 2026-03-14 20:27:56,741 | INFO     | architecture information:
[2026-03-14 21:28:40] 2026-03-14 20:27:56,741 | INFO     | executing command: cat /etc/os-release
[2026-03-14 21:28:40] 2026-03-14 20:27:56,754 | INFO     | cat /etc/os-release:
[2026-03-14 21:28:40] NAME="CentOS Linux"
[2026-03-14 21:28:40] VERSION="7 (Core)"
[2026-03-14 21:28:40] ID="centos"
[2026-03-14 21:28:40] ID_LIKE="rhel fedora"
[2026-03-14 21:28:40] VERSION_ID="7"
[2026-03-14 21:28:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 21:28:40] ANSI_COLOR="0;31"
[2026-03-14 21:28:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 21:28:40] HOME_URL="https://www.centos.org/"
[2026-03-14 21:28:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 21:28:40] 
[2026-03-14 21:28:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 21:28:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 21:28:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 21:28:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 21:28:40] 
[2026-03-14 21:28:40] 2026-03-14 20:27:56,755 | INFO     | **************************************
[2026-03-14 21:28:40] 2026-03-14 20:27:57,257 | INFO     | executing command: df -mP /var/lib/boinc/var/slot232/slots/0
[2026-03-14 21:28:40] 2026-03-14 20:27:57,277 | INFO     | sufficient remaining disk space (20230176768 B)
[2026-03-14 21:28:40] 2026-03-14 20:27:57,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 21:28:40] 2026-03-14 20:27:57,278 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 21:28:40] 2026-03-14 20:27:57,278 | INFO     | update_server=False
[2026-03-14 21:28:40] 2026-03-14 20:27:57,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 21:28:40] 2026-03-14 20:27:57,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 21:28:40] 2026-03-14 20:27:57,444 | INFO     | all data control threads have been joined
[2026-03-14 21:28:40] 2026-03-14 20:27:57,750 | INFO     | all job control threads have been joined
[2026-03-14 21:28:40] 2026-03-14 20:27:57,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 21:28:40] 2026-03-14 20:27:57,796 | WARNING  | process 2619749 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 21:28:40] 2026-03-14 20:27:58,110 | INFO     | using path: /var/lib/boinc/var/slot232/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 21:28:40] 2026-03-14 20:27:58,110 | INFO     | using path: /var/lib/boinc/var/slot232/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 21:28:40] 2026-03-14 20:27:58,110 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 21:28:40] 2026-03-14 20:27:58,110 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 21:28:40] 2026-03-14 20:27:58,110 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7051676997/payload.stdout) since it has not been created yet
[2026-03-14 21:28:40] 2026-03-14 20:27:58,111 | INFO     | executing command: df -mP /var/lib/boinc/var/slot232/slots/0
[2026-03-14 21:28:40] 2026-03-14 20:27:58,124 | INFO     | sufficient remaining disk space (20230176768 B)
[2026-03-14 21:28:40] 2026-03-14 20:27:58,124 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 21:28:40] 2026-03-14 20:27:58,124 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7051676997/HITS.48967059._002846.pool.root.1 since it does not exist
[2026-03-14 21:28:40] 2026-03-14 20:27:58,283 | INFO     | [job] retrieve thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:58,450 | INFO     | [data] control thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:58,470 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:58,620 | INFO     | number of running child processes to parent process 2619749: 1
[2026-03-14 21:28:40] 2026-03-14 20:27:58,621 | INFO     | maximum number of monitored processes: 6
[2026-03-14 21:28:40] 2026-03-14 20:27:58,621 | INFO     | aborting job monitoring since job object (job id=7051676997) has expired
[2026-03-14 21:28:40] 2026-03-14 20:27:58,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:28:40] 2026-03-14 20:27:58,621 | INFO     | will abort loop
[2026-03-14 21:28:40] 2026-03-14 20:27:58,678 | INFO     | [payload] failed_post thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:58,735 | INFO     | all payload control threads have been joined
[2026-03-14 21:28:40] 2026-03-14 20:27:58,755 | INFO     | [job] control thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,211 | INFO     | [payload] validate_post thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,528 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,530 | INFO     | [job] validate thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,622 | INFO     | job.realtimelogging is not enabled
[2026-03-14 21:28:40] 2026-03-14 20:27:59,626 | INFO     | [job] job monitor thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,740 | INFO     | [payload] control thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,754 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,760 | INFO     | [data] copytool_in thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,802 | INFO     | [data] copytool_out thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:27:59,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:28:40] 2026-03-14 20:28:00,627 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:28:00,935 | INFO     | [job] queue monitor thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:28:01,284 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 21:28:40] 2026-03-14 20:28:26,978 | INFO     | PID=2598118 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 21:28:40] 2026-03-14 20:28:26,978 | INFO     | .. there are 50 such processes running
[2026-03-14 21:28:40] 2026-03-14 20:28:26,978 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 21:28:40] 2026-03-14 20:28:26,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 21:28:40] 2026-03-14 20:28:26,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 21:28:40] 2026-03-14 20:28:33,237 | INFO     | [monitor] cgroup control has ended
[2026-03-14 21:28:40] 2026-03-14 20:28:34,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22851588384576)>', '<ExcThread(monitor, started 22851349657344)>']
[2026-03-14 21:28:40] 2026-03-14 20:28:35,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 21:28:40] 2026-03-14 20:28:35,021 | INFO     | [monitor] control thread has ended
[2026-03-14 21:28:40] 2026-03-14 20:28:39,800 | INFO     | all workflow threads have been joined
[2026-03-14 21:28:40] 2026-03-14 20:28:39,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 21:28:40] 2026-03-14 20:28:39,800 | INFO     | traces error code: 0
[2026-03-14 21:28:40] 2026-03-14 20:28:39,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 21:28:40] 2026-03-14 20:28:39,988 [wrapper] ==== pilot stdout END ====
[2026-03-14 21:28:40] 2026-03-14 20:28:39,991 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 21:28:40] 2026-03-14 20:28:39,993 [wrapper] pilotpid: 2598118
[2026-03-14 21:28:40] 2026-03-14 20:28:39,995 [wrapper] Pilot exit status: 0
[2026-03-14 21:28:40] 2026-03-14 20:28:40,004 [wrapper] pandaids: 7051676997
[2026-03-14 21:28:40] 2026-03-14 20:28:40,123 [wrapper] cleanup supervisor_pilot  141262 2598119
[2026-03-14 21:28:40] 2026-03-14 20:28:40,125 [wrapper] Test setup, not cleaning
[2026-03-14 21:28:40] 2026-03-14 20:28:40,127 [wrapper] apfmon messages muted
[2026-03-14 21:28:40] 2026-03-14 20:28:40,130 [wrapper] ==== wrapper stdout END ====
[2026-03-14 21:28:40] 2026-03-14 20:28:40,132 [wrapper] ==== wrapper stderr END ====
[2026-03-14 21:28:40]  *** Error codes and diagnostics ***
[2026-03-14 21:28:40]     "exeErrorCode": 0,
[2026-03-14 21:28:40]     "exeErrorDiag": "",
[2026-03-14 21:28:40]     "pilotErrorCode": 0,
[2026-03-14 21:28:40]     "pilotErrorDiag": "",
[2026-03-14 21:28:40]  *** Listing of results directory ***
[2026-03-14 21:28:40] total 483416
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc    585013 Mar 12 11:55 pilot3.tar.gz
[2026-03-14 21:28:40] -rwx------. 1 boinc boinc     36322 Mar 12 12:27 runpilot2-wrapper.sh
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc      5111 Mar 12 12:27 queuedata.json
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc       100 Mar 14 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 21:28:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 18:24 run_atlas
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc       105 Mar 14 18:24 job.xml
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc      6708 Mar 14 18:25 init_data.xml
[2026-03-14 21:28:40] -rw-r--r--. 2 boinc boinc 226378746 Mar 14 18:25 EVNT.48967057._000109.pool.root.1
[2026-03-14 21:28:40] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:25 start_atlas.sh
[2026-03-14 21:28:40] drwxrwx--x. 2 boinc boinc      4096 Mar 14 18:25 shared
[2026-03-14 21:28:40] -rw-r--r--. 2 boinc boinc    597520 Mar 14 18:25 input.tar.gz
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc         0 Mar 14 18:25 boinc_lockfile
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc      2548 Mar 14 18:25 pandaJob.out
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc   1005897 Mar 14 18:25 agis_schedconf.cvmfs.json
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc       438 Mar 14 18:25 workernode_map.json
[2026-03-14 21:28:40] drwx------. 5 boinc boinc      4096 Mar 14 18:25 pilot3
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc 260900347 Mar 14 21:27 HITS.48967059._002846.pool.root.1
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc       531 Mar 14 21:27 boinc_task_state.xml
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc      1032 Mar 14 21:27 memory_monitor_summary.json
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc   1511579 Mar 14 21:27 agis_ddmendpoints.agis.ALL.json
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc    354499 Mar 14 21:27 log.48967059._002846.job.log.tgz.1
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc      6349 Mar 14 21:27 heartbeat.json
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc        95 Mar 14 21:28 pilot_heartbeat.json
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc      8192 Mar 14 21:28 boinc_mmap_file
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc        28 Mar 14 21:28 wrapper_checkpoint.txt
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc      6447 Mar 14 21:28 pilotlog.txt
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc   1547131 Mar 14 21:28 log.48967059._002846.job.log.1
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc       357 Mar 14 21:28 output.list
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc       620 Mar 14 21:28 runtime_log
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc   1914880 Mar 14 21:28 result.tar.gz
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc      9222 Mar 14 21:28 runtime_log.err
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc       665 Mar 14 21:28 6pNODmeNtK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmD0jLDm9NQOGo.diag
[2026-03-14 21:28:40] -rw-r--r--. 1 boinc boinc     21272 Mar 14 21:28 stderr.txt
[2026-03-14 21:28:40] HITS file was successfully produced:
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc 260900347 Mar 14 21:27 shared/HITS.pool.root.1
[2026-03-14 21:28:40]  *** Contents of shared directory: ***
[2026-03-14 21:28:40] total 478344
[2026-03-14 21:28:40] -rw-r--r--. 2 boinc boinc 226378746 Mar 14 18:25 ATLAS.root_0
[2026-03-14 21:28:40] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:25 start_atlas.sh
[2026-03-14 21:28:40] -rw-r--r--. 2 boinc boinc    597520 Mar 14 18:25 input.tar.gz
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc 260900347 Mar 14 21:27 HITS.pool.root.1
[2026-03-14 21:28:40] -rw-------. 1 boinc boinc   1914880 Mar 14 21:28 result.tar.gz
21:28:41 (2589279): run_atlas exited; CPU time 42818.065251
21:28:41 (2589279): called boinc_finish(0)

</stderr_txt>
]]>

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