Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:22:06 (32725): wrapper (7.7.26015): starting
06:22:06 (32725): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 06:22:06] Arguments: --nthreads 8
[2026-03-13 06:22:06] Threads: 8
[2026-03-13 06:22:06] Checking for CVMFS
[2026-03-13 06:22:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 06:22:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 06:22:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 06:22:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 06:22:11] 2.11.2.0 25223 23869 105608 157229 3 53 20740061 25165824 4834 130560 152 6877330 99.833 3311906 158 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 06:22:11] CVMFS is ok
[2026-03-13 06:22:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 06:22:11] Checking for apptainer binary...
[2026-03-13 06:22:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 06:22:11] Running /usr/bin/apptainer --version
[2026-03-13 06:22:12] apptainer version 1.3.2-1.el7
[2026-03-13 06:22:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 06:22:27] cg-vwn444.simple-grid.lan
[2026-03-13 06:22:27] apptainer works
[2026-03-13 06:22:27] Set ATHENA_PROC_NUMBER=8
[2026-03-13 06:22:27] Set ATHENA_CORE_NUMBER=8
[2026-03-13 06:22:27] Starting ATLAS job with PandaID=7043234330
[2026-03-13 06:22:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 10:08:09]  *** The last 200 lines of the pilot log: ***
[2026-03-13 10:08:09] 2026-03-13 09:07:26,810 | INFO     | job 7043234330 has finished - writing final server update
[2026-03-13 10:08:09] 2026-03-13 09:07:26,811 | INFO     | total number of processed events: 400 (read)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,817 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7043234330/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,818 | INFO     | extracted standard info from prmon json
[2026-03-13 10:08:09] 2026-03-13 09:07:26,818 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 10:08:09] 2026-03-13 09:07:26,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 10:08:09] 2026-03-13 09:07:26,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 10:08:09] 2026-03-13 09:07:26,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 10:08:09] 2026-03-13 09:07:26,823 | INFO     | fitting pss+swap vs Time
[2026-03-13 10:08:09] 2026-03-13 09:07:26,824 | INFO     | sum of square deviations: 2954447953.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,825 | INFO     | sum of deviations: 43318495835.99999
[2026-03-13 10:08:09] 2026-03-13 09:07:26,826 | INFO     | mean x: 1773386376.5
[2026-03-13 10:08:09] 2026-03-13 09:07:26,826 | INFO     | mean y: 2451004.754716981
[2026-03-13 10:08:09] 2026-03-13 09:07:26,826 | INFO     | intersect: -25999168109.242367
[2026-03-13 10:08:09] 2026-03-13 09:07:26,826 | INFO     | chi2: 6.029486716963921
[2026-03-13 10:08:09] 2026-03-13 09:07:26,827 | INFO     | sum of square deviations: 2750295288.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,829 | INFO     | sum of deviations: 56208030685.999886
[2026-03-13 10:08:09] 2026-03-13 09:07:26,829 | INFO     | mean x: 1773386224.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,829 | INFO     | mean y: 2460432.884057971
[2026-03-13 10:08:09] 2026-03-13 09:07:26,829 | INFO     | intersect: -36240392373.37122
[2026-03-13 10:08:09] 2026-03-13 09:07:26,829 | INFO     | chi2: 5.314963159747892
[2026-03-13 10:08:09] 2026-03-13 09:07:26,830 | INFO     | current chi2=5.314963159747892 (change=11.850487292819162 %)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,830 | INFO     | right removable region: 206
[2026-03-13 10:08:09] 2026-03-13 09:07:26,830 | INFO     | sum of square deviations: 2750295288.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,832 | INFO     | sum of deviations: -26424673020.999992
[2026-03-13 10:08:09] 2026-03-13 09:07:26,832 | INFO     | mean x: 1773386529.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,832 | INFO     | mean y: 2503035.3236714974
[2026-03-13 10:08:09] 2026-03-13 09:07:26,832 | INFO     | intersect: 17041094990.570885
[2026-03-13 10:08:09] 2026-03-13 09:07:26,833 | INFO     | chi2: 1.7012841990324548
[2026-03-13 10:08:09] 2026-03-13 09:07:26,833 | INFO     | current chi2=1.7012841990324548 (change=71.78392989496265 %)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,833 | INFO     | sum of square deviations: 2555770710.5
[2026-03-13 10:08:09] 2026-03-13 09:07:26,835 | INFO     | sum of deviations: -49414177585.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,835 | INFO     | mean x: 1773386681.5
[2026-03-13 10:08:09] 2026-03-13 09:07:26,835 | INFO     | mean y: 2520879.425742574
[2026-03-13 10:08:09] 2026-03-13 09:07:26,835 | INFO     | intersect: 34289808094.393158
[2026-03-13 10:08:09] 2026-03-13 09:07:26,835 | INFO     | chi2: 0.9772059284934087
[2026-03-13 10:08:09] 2026-03-13 09:07:26,836 | INFO     | current chi2=0.9772059284934087 (change=42.560688622796825 %)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,836 | INFO     | sum of square deviations: 2370641658.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,838 | INFO     | sum of deviations: -45424752270.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,838 | INFO     | mean x: 1773386834.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,838 | INFO     | mean y: 2517560.076142132
[2026-03-13 10:08:09] 2026-03-13 09:07:26,838 | INFO     | intersect: 33983046562.20743
[2026-03-13 10:08:09] 2026-03-13 09:07:26,838 | INFO     | chi2: 0.9664935853304287
[2026-03-13 10:08:09] 2026-03-13 09:07:26,839 | INFO     | current chi2=0.9664935853304287 (change=1.0962216714644328 %)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,839 | INFO     | left removable region: 30
[2026-03-13 10:08:09] 2026-03-13 09:07:26,839 | INFO     | sum of square deviations: 1690450300.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,840 | INFO     | sum of deviations: -11868119069.0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,841 | INFO     | mean x: 1773387108.5
[2026-03-13 10:08:09] 2026-03-13 09:07:26,841 | INFO     | mean y: 2510625.5795454546
[2026-03-13 10:08:09] 2026-03-13 09:07:26,841 | INFO     | intersect: 12452902902.18633
[2026-03-13 10:08:09] 2026-03-13 09:07:26,841 | INFO     | chi2: 0.10971113620422988
[2026-03-13 10:08:09] 2026-03-13 09:07:26,841 | INFO     | current memory leak: -7.02 B/s (using 176 data points, chi2=0.11)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,842 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,842 | INFO     | ..............................
[2026-03-13 10:08:09] 2026-03-13 09:07:26,842 | INFO     | . Timing measurements:
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . get job = 0 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . initial setup = 101 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . payload setup = 145 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . stage-in = 0 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . payload execution = 13019 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . stage-out = 3 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | . log creation = 1 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,847 | INFO     | ..............................
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | 
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | job summary report
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | --------------------------------------------------
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | PanDA job id: 7043234330
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | task id: 48955010
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | errors: (none)
[2026-03-13 10:08:09] 2026-03-13 09:07:26,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | pilot state: finished 
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | transexitcode: 0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | exeerrorcode: 0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | exeerrordiag: 
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | exitcode: 0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | exitmsg: OK
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | cpuconsumptiontime: 50071 s
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | nevents: 400
[2026-03-13 10:08:09] 2026-03-13 09:07:26,996 | INFO     | neventsw: 0
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | pid: 8976
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | pgrp: 8976
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | corecount: 8
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | event service: False
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | sizes: {0: 2279744, 1: 2280205, 12: 2280205, 13168: 2310317, 13169: 2310316, 13173: 2319554, 13176: 2319692}
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | --------------------------------------------------
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | 
[2026-03-13 10:08:09] 2026-03-13 09:07:26,997 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-13 10:08:09] 2026-03-13 09:07:27,073 | INFO     | time since job start (13189s) is within the limit (345600.0s)
[2026-03-13 10:08:09] 2026-03-13 09:07:27,333 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,333 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,333 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,335 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 10:08:09] 2026-03-13 09:07:27,336 | INFO     | job 7043234330 has completed (purged errors)
[2026-03-13 10:08:09] 2026-03-13 09:07:27,336 | INFO     | overall cleanup function is called
[2026-03-13 10:08:09] 2026-03-13 09:07:28,345 | INFO     | --- collectZombieJob: --- 10, [8976]
[2026-03-13 10:08:09] 2026-03-13 09:07:28,345 | INFO     | zombie collector waiting for pid 8976
[2026-03-13 10:08:09] 2026-03-13 09:07:28,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 10:08:09] 2026-03-13 09:07:28,345 | INFO     | collected zombie processes
[2026-03-13 10:08:09] 2026-03-13 09:07:28,345 | INFO     | will attempt to kill all subprocesses of pid=8976
[2026-03-13 10:08:09] 2026-03-13 09:07:28,467 | INFO     | process IDs to be killed: [8976] (in reverse order)
[2026-03-13 10:08:09] 2026-03-13 09:07:28,873 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 10:08:09] 2026-03-13 09:07:28,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 10:08:09] 2026-03-13 09:07:28,877 | INFO     | did not find any defunct processes belonging to 8976
[2026-03-13 10:08:09] 2026-03-13 09:07:28,880 | INFO     | did not find any defunct processes belonging to 8976
[2026-03-13 10:08:09] 2026-03-13 09:07:28,880 | INFO     | ready for new job
[2026-03-13 10:08:09] 2026-03-13 09:07:28,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 10:08:09] 2026-03-13 09:07:28,883 | INFO     | **************************************
[2026-03-13 10:08:09] 2026-03-13 09:07:28,883 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 10:08:09] 2026-03-13 09:07:28,883 | INFO     | **************************************
[2026-03-13 10:08:09] 2026-03-13 09:07:28,883 | INFO     | 
[2026-03-13 10:08:09] 2026-03-13 09:07:28,884 | INFO     | pilot is running in a VM
[2026-03-13 10:08:09] 2026-03-13 09:07:28,884 | INFO     | architecture information:
[2026-03-13 10:08:09] 2026-03-13 09:07:28,884 | INFO     | executing command: cat /etc/os-release
[2026-03-13 10:08:09] 2026-03-13 09:07:28,990 | INFO     | cat /etc/os-release:
[2026-03-13 10:08:09] NAME="CentOS Linux"
[2026-03-13 10:08:09] VERSION="7 (Core)"
[2026-03-13 10:08:09] ID="centos"
[2026-03-13 10:08:09] ID_LIKE="rhel fedora"
[2026-03-13 10:08:09] VERSION_ID="7"
[2026-03-13 10:08:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 10:08:09] ANSI_COLOR="0;31"
[2026-03-13 10:08:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 10:08:09] HOME_URL="https://www.centos.org/"
[2026-03-13 10:08:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 10:08:09] 
[2026-03-13 10:08:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 10:08:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 10:08:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 10:08:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 10:08:09] 
[2026-03-13 10:08:09] 2026-03-13 09:07:28,990 | INFO     | **************************************
[2026-03-13 10:08:09] 2026-03-13 09:07:29,494 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-13 10:08:09] 2026-03-13 09:07:29,715 | INFO     | sufficient remaining disk space (494984495104 B)
[2026-03-13 10:08:09] 2026-03-13 09:07:29,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 10:08:09] 2026-03-13 09:07:29,716 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 10:08:09] 2026-03-13 09:07:29,716 | INFO     | update_server=False
[2026-03-13 10:08:09] 2026-03-13 09:07:29,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 10:08:09] 2026-03-13 09:07:29,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:08:09] 2026-03-13 09:07:29,719 | INFO     | aborting loop
[2026-03-13 10:08:09] 2026-03-13 09:07:29,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 10:08:09] 2026-03-13 09:07:30,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 10:08:09] 2026-03-13 09:07:30,668 | INFO     | all payload control threads have been joined
[2026-03-13 10:08:09] 2026-03-13 09:07:30,675 | INFO     | all data control threads have been joined
[2026-03-13 10:08:09] 2026-03-13 09:07:30,722 | INFO     | [job] retrieve thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:30,725 | INFO     | [job] job monitor thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:30,984 | INFO     | [job] validate thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,094 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,199 | INFO     | all job control threads have been joined
[2026-03-13 10:08:09] 2026-03-13 09:07:31,296 | INFO     | [payload] failed_post thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,648 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,673 | INFO     | [payload] control thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,681 | INFO     | [data] control thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,702 | INFO     | [data] copytool_in thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,728 | INFO     | [data] copytool_out thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:31,904 | INFO     | [payload] validate_post thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:32,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:08:09] 2026-03-13 09:07:32,012 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:32,110 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:32,205 | INFO     | [job] control thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:33,015 | INFO     | [job] queue monitor thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:07:34,178 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 10:08:09] 2026-03-13 09:08:00,239 | INFO     | [monitor] cgroup control has ended
[2026-03-13 10:08:09] 2026-03-13 09:08:00,253 | INFO     | PID=4459 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 10:08:09] 2026-03-13 09:08:00,253 | INFO     | .. there are 9 such processes running
[2026-03-13 10:08:09] 2026-03-13 09:08:00,254 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 10:08:09] 2026-03-13 09:08:00,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 10:08:09] 2026-03-13 09:08:00,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 10:08:09] 2026-03-13 09:08:00,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176841828160)>', '<ExcThread(monitor, started 140176164636416)>']
[2026-03-13 10:08:09] 2026-03-13 09:08:01,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 10:08:09] 2026-03-13 09:08:01,261 | INFO     | [monitor] control thread has ended
[2026-03-13 10:08:09] 2026-03-13 09:08:05,833 | INFO     | all workflow threads have been joined
[2026-03-13 10:08:09] 2026-03-13 09:08:05,833 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 10:08:09] 2026-03-13 09:08:05,833 | INFO     | traces error code: 0
[2026-03-13 10:08:09] 2026-03-13 09:08:05,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 10:08:09] 2026-03-13 09:08:06,056 [wrapper] ==== pilot stdout END ====
[2026-03-13 10:08:09] 2026-03-13 09:08:06,060 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 10:08:09] 2026-03-13 09:08:06,063 [wrapper] pilotpid: 4459
[2026-03-13 10:08:09] 2026-03-13 09:08:06,101 [wrapper] Pilot exit status: 0
[2026-03-13 10:08:09] 2026-03-13 09:08:06,603 [wrapper] pandaids: 7043234330
[2026-03-13 10:08:09] 2026-03-13 09:08:07,126 [wrapper] cleanup supervisor_pilot 16704 4460
[2026-03-13 10:08:09] 2026-03-13 09:08:07,183 [wrapper] Test setup, not cleaning
[2026-03-13 10:08:09] 2026-03-13 09:08:07,263 [wrapper] apfmon messages muted
[2026-03-13 10:08:09] 2026-03-13 09:08:07,342 [wrapper] ==== wrapper stdout END ====
[2026-03-13 10:08:09] 2026-03-13 09:08:07,450 [wrapper] ==== wrapper stderr END ====
[2026-03-13 10:08:09]  *** Error codes and diagnostics ***
[2026-03-13 10:08:09]     "exeErrorCode": 0,
[2026-03-13 10:08:09]     "exeErrorDiag": "",
[2026-03-13 10:08:09]     "pilotErrorCode": 0,
[2026-03-13 10:08:09]     "pilotErrorDiag": "",
[2026-03-13 10:08:09]  *** Listing of results directory ***
[2026-03-13 10:08:09] total 617480
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc    585013 Mar 12 11:55 pilot3.tar.gz
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc      5111 Mar 12 12:24 queuedata.json
[2026-03-13 10:08:09] -rwx------. 1 boinc boinc     36322 Mar 12 12:24 runpilot2-wrapper.sh
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc       100 Mar 13 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 10:08:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 06:22 run_atlas
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc       105 Mar 13 06:22 job.xml
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc      6391 Mar 13 06:22 init_data.xml
[2026-03-13 10:08:09] -rw-r--r--. 2 boinc boinc 445119465 Mar 13 06:22 EVNT.46701403._001472.pool.root.1
[2026-03-13 10:08:09] -rw-r--r--. 2 boinc boinc     15845 Mar 13 06:22 start_atlas.sh
[2026-03-13 10:08:09] drwxrwx--x. 2 boinc boinc        68 Mar 13 06:22 shared
[2026-03-13 10:08:09] -rw-r--r--. 2 boinc boinc    597527 Mar 13 06:22 input.tar.gz
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc         0 Mar 13 06:22 boinc_lockfile
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc      2562 Mar 13 06:22 pandaJob.out
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc       415 Mar 13 06:27 workernode_map.json
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc   1006514 Mar 13 06:27 agis_schedconf.cvmfs.json
[2026-03-13 10:08:09] drwx------. 5 boinc boinc      4096 Mar 13 06:27 pilot3
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc 178683818 Mar 13 10:06 HITS.48955010._023871.pool.root.1
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc       532 Mar 13 10:06 boinc_task_state.xml
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc      1011 Mar 13 10:07 memory_monitor_summary.json
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc   1511578 Mar 13 10:07 agis_ddmendpoints.agis.ALL.json
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc    449072 Mar 13 10:07 log.48955010._023871.job.log.tgz.1
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc      6316 Mar 13 10:07 heartbeat.json
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc      8192 Mar 13 10:07 boinc_mmap_file
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc        28 Mar 13 10:07 wrapper_checkpoint.txt
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc        95 Mar 13 10:08 pilot_heartbeat.json
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc      4879 Mar 13 10:08 pilotlog.txt
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc   1841285 Mar 13 10:08 log.48955010._023871.job.log.1
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc       357 Mar 13 10:08 output.list
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc       620 Mar 13 10:08 runtime_log
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc   2304000 Mar 13 10:08 result.tar.gz
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc      8816 Mar 13 10:08 runtime_log.err
[2026-03-13 10:08:09] -rw-------. 1 boinc boinc       655 Mar 13 10:08 cqeMDmrKtK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNgmLDmv6rBVo.diag
[2026-03-13 10:08:09] -rw-r--r--. 1 boinc boinc     20707 Mar 13 10:08 stderr.txt
[2026-03-13 10:08:10] HITS file was successfully produced:
[2026-03-13 10:08:10] -rw-------. 1 boinc boinc 178683818 Mar 13 10:06 shared/HITS.pool.root.1
[2026-03-13 10:08:10]  *** Contents of shared directory: ***
[2026-03-13 10:08:10] total 612036
[2026-03-13 10:08:10] -rw-r--r--. 2 boinc boinc 445119465 Mar 13 06:22 ATLAS.root_0
[2026-03-13 10:08:10] -rw-r--r--. 2 boinc boinc     15845 Mar 13 06:22 start_atlas.sh
[2026-03-13 10:08:10] -rw-r--r--. 2 boinc boinc    597527 Mar 13 06:22 input.tar.gz
[2026-03-13 10:08:10] -rw-------. 1 boinc boinc 178683818 Mar 13 10:06 HITS.pool.root.1
[2026-03-13 10:08:10] -rw-------. 1 boinc boinc   2304000 Mar 13 10:08 result.tar.gz
10:08:11 (32725): run_atlas exited; CPU time 50272.767548
10:08:11 (32725): called boinc_finish(0)

</stderr_txt>
]]>

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