Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:24:48 (1571): wrapper (7.7.26015): starting
04:24:48 (1571): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 04:24:48] Arguments: --nthreads 8
[2026-03-13 04:24:48] Threads: 8
[2026-03-13 04:24:48] Checking for CVMFS
[2026-03-13 04:24:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 04:24:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 04:24:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 04:24:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 04:24:52] 2.11.2.0 26228 125591 138168 157225 2 53 19447588 25165824 5084 130560 153 42756098 99.836 29279046 1026 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 04:24:52] CVMFS is ok
[2026-03-13 04:24:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 04:24:52] Checking for apptainer binary...
[2026-03-13 04:24:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 04:24:52] Running /usr/bin/apptainer --version
[2026-03-13 04:24:53] apptainer version 1.3.2-1.el7
[2026-03-13 04:24:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 04:25:05] cg-vwn495.simple-grid.lan
[2026-03-13 04:25:05] apptainer works
[2026-03-13 04:25:05] Set ATHENA_PROC_NUMBER=8
[2026-03-13 04:25:05] Set ATHENA_CORE_NUMBER=8
[2026-03-13 04:25:05] Starting ATLAS job with PandaID=7051693690
[2026-03-13 04:25:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 09:20:14]  *** The last 200 lines of the pilot log: ***
[2026-03-13 09:20:14] 2026-03-13 08:19:29,658 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7051693690/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,659 | INFO     | extracted standard info from prmon json
[2026-03-13 09:20:14] 2026-03-13 08:19:29,659 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 09:20:14] 2026-03-13 08:19:29,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 09:20:14] 2026-03-13 08:19:29,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 09:20:14] 2026-03-13 08:19:29,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 09:20:14] 2026-03-13 08:19:29,665 | INFO     | fitting pss+swap vs Time
[2026-03-13 09:20:14] 2026-03-13 08:19:29,665 | INFO     | sum of square deviations: 6806862510.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,668 | INFO     | sum of deviations: 63411173535.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,668 | INFO     | mean x: 1773381424.5
[2026-03-13 09:20:14] 2026-03-13 08:19:29,668 | INFO     | mean y: 2461549.807142857
[2026-03-13 09:20:14] 2026-03-13 08:19:29,668 | INFO     | intersect: -16517953999.575684
[2026-03-13 09:20:14] 2026-03-13 08:19:29,668 | INFO     | chi2: 6.787812142798092
[2026-03-13 09:20:14] 2026-03-13 08:19:29,669 | INFO     | sum of square deviations: 6448679050.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,671 | INFO     | sum of deviations: 80855441195.99998
[2026-03-13 09:20:14] 2026-03-13 08:19:29,671 | INFO     | mean x: 1773381272.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,672 | INFO     | mean y: 2468862.7163636363
[2026-03-13 09:20:14] 2026-03-13 08:19:29,672 | INFO     | intersect: -22232708922.458675
[2026-03-13 09:20:14] 2026-03-13 08:19:29,672 | INFO     | chi2: 6.0695385947416245
[2026-03-13 09:20:14] 2026-03-13 08:19:29,672 | INFO     | current chi2=6.0695385947416245 (change=10.581812415338572 %)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,672 | INFO     | right removable region: 274
[2026-03-13 09:20:14] 2026-03-13 08:19:29,673 | INFO     | sum of square deviations: 6448679050.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,679 | INFO     | sum of deviations: -32533456594.000008
[2026-03-13 09:20:14] 2026-03-13 08:19:29,684 | INFO     | mean x: 1773381577.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,684 | INFO     | mean y: 2502368.0872727274
[2026-03-13 09:20:14] 2026-03-13 08:19:29,684 | INFO     | intersect: 8949176890.511951
[2026-03-13 09:20:14] 2026-03-13 08:19:29,684 | INFO     | chi2: 2.1873705887546335
[2026-03-13 09:20:14] 2026-03-13 08:19:29,685 | INFO     | current chi2=2.1873705887546335 (change=67.77502761216739 %)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,685 | INFO     | sum of square deviations: 6103286527.5
[2026-03-13 09:20:14] 2026-03-13 08:19:29,687 | INFO     | sum of deviations: -73471832622.5
[2026-03-13 09:20:14] 2026-03-13 08:19:29,688 | INFO     | mean x: 1773381729.5
[2026-03-13 09:20:14] 2026-03-13 08:19:29,688 | INFO     | mean y: 2520320.5814814814
[2026-03-13 09:20:14] 2026-03-13 08:19:29,688 | INFO     | intersect: 21350625971.291252
[2026-03-13 09:20:14] 2026-03-13 08:19:29,688 | INFO     | chi2: 1.0043083676191815
[2026-03-13 09:20:14] 2026-03-13 08:19:29,688 | INFO     | current chi2=1.0043083676191815 (change=54.08604409411125 %)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,689 | INFO     | sum of square deviations: 5770452380.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,691 | INFO     | sum of deviations: -68663266275.99999
[2026-03-13 09:20:14] 2026-03-13 08:19:29,691 | INFO     | mean x: 1773381882.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,691 | INFO     | mean y: 2518100.1358490568
[2026-03-13 09:20:14] 2026-03-13 08:19:29,691 | INFO     | intersect: 21104189919.633648
[2026-03-13 09:20:14] 2026-03-13 08:19:29,692 | INFO     | chi2: 0.9944136167586792
[2026-03-13 09:20:14] 2026-03-13 08:19:29,692 | INFO     | current chi2=0.9944136167586792 (change=0.985230351506364 %)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,692 | INFO     | left removable region: 30
[2026-03-13 09:20:14] 2026-03-13 08:19:29,692 | INFO     | sum of square deviations: 4504437945.0
[2026-03-13 09:20:14] 2026-03-13 08:19:29,694 | INFO     | sum of deviations: -22965892195.999985
[2026-03-13 09:20:14] 2026-03-13 08:19:29,694 | INFO     | mean x: 1773382156.5
[2026-03-13 09:20:14] 2026-03-13 08:19:29,695 | INFO     | mean y: 2513132.204918033
[2026-03-13 09:20:14] 2026-03-13 08:19:29,695 | INFO     | intersect: 9044108093.835358
[2026-03-13 09:20:14] 2026-03-13 08:19:29,695 | INFO     | chi2: 0.1380865827243068
[2026-03-13 09:20:14] 2026-03-13 08:19:29,695 | INFO     | current memory leak: -5.10 B/s (using 244 data points, chi2=0.14)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,696 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-13 09:20:14] 2026-03-13 08:19:29,696 | INFO     | ..............................
[2026-03-13 09:20:14] 2026-03-13 08:19:29,696 | INFO     | . Timing measurements:
[2026-03-13 09:20:14] 2026-03-13 08:19:29,696 | INFO     | . get job = 0 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,696 | INFO     | . initial setup = 103 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,696 | INFO     | . payload setup = 136 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,697 | INFO     | . stage-in = 0 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,697 | INFO     | . payload execution = 17171 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,697 | INFO     | . stage-out = 4 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,697 | INFO     | . log creation = 1 s
[2026-03-13 09:20:14] 2026-03-13 08:19:29,697 | INFO     | ..............................
[2026-03-13 09:20:14] 2026-03-13 08:19:30,301 | INFO     | 
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | job summary report
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | --------------------------------------------------
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | PanDA job id: 7051693690
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | task id: 48967094
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | errors: (none)
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | pilot state: finished 
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | transexitcode: 0
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | exeerrorcode: 0
[2026-03-13 09:20:14] 2026-03-13 08:19:30,302 | INFO     | exeerrordiag: 
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | exitcode: 0
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | exitmsg: OK
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | cpuconsumptiontime: 67130 s
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | nevents: 400
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | neventsw: 0
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | pid: 10159
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | pgrp: 10159
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | corecount: 8
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | event service: False
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | sizes: {0: 2279686, 1: 2279770, 2: 2280231, 12: 2280231, 17312: 2312155, 17317: 2321155, 17320: 2321533}
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | --------------------------------------------------
[2026-03-13 09:20:14] 2026-03-13 08:19:30,303 | INFO     | 
[2026-03-13 09:20:14] 2026-03-13 08:19:30,304 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-13 09:20:14] 2026-03-13 08:19:30,826 | INFO     | time since job start (17333s) is within the limit (345600.0s)
[2026-03-13 09:20:14] 2026-03-13 08:19:30,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,829 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,829 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,829 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 09:20:14] 2026-03-13 08:19:30,831 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,831 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 09:20:14] 2026-03-13 08:19:30,831 | INFO     | job 7051693690 has completed (purged errors)
[2026-03-13 09:20:14] 2026-03-13 08:19:30,831 | INFO     | overall cleanup function is called
[2026-03-13 09:20:14] 2026-03-13 08:19:31,839 | INFO     | --- collectZombieJob: --- 10, [10159]
[2026-03-13 09:20:14] 2026-03-13 08:19:31,840 | INFO     | zombie collector waiting for pid 10159
[2026-03-13 09:20:14] 2026-03-13 08:19:31,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 09:20:14] 2026-03-13 08:19:31,840 | INFO     | collected zombie processes
[2026-03-13 09:20:14] 2026-03-13 08:19:31,840 | INFO     | will attempt to kill all subprocesses of pid=10159
[2026-03-13 09:20:14] 2026-03-13 08:19:31,959 | INFO     | process IDs to be killed: [10159] (in reverse order)
[2026-03-13 09:20:14] 2026-03-13 08:19:32,635 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 09:20:14] 2026-03-13 08:19:32,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 09:20:14] 2026-03-13 08:19:32,639 | INFO     | did not find any defunct processes belonging to 10159
[2026-03-13 09:20:14] 2026-03-13 08:19:32,641 | INFO     | did not find any defunct processes belonging to 10159
[2026-03-13 09:20:14] 2026-03-13 08:19:32,641 | INFO     | ready for new job
[2026-03-13 09:20:14] 2026-03-13 08:19:32,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 09:20:14] 2026-03-13 08:19:32,644 | INFO     | **************************************
[2026-03-13 09:20:14] 2026-03-13 08:19:32,644 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 09:20:14] 2026-03-13 08:19:32,644 | INFO     | **************************************
[2026-03-13 09:20:14] 2026-03-13 08:19:32,644 | INFO     | 
[2026-03-13 09:20:14] 2026-03-13 08:19:32,645 | INFO     | pilot is running in a VM
[2026-03-13 09:20:14] 2026-03-13 08:19:32,645 | INFO     | architecture information:
[2026-03-13 09:20:14] 2026-03-13 08:19:32,645 | INFO     | executing command: cat /etc/os-release
[2026-03-13 09:20:14] 2026-03-13 08:19:32,664 | INFO     | cat /etc/os-release:
[2026-03-13 09:20:14] NAME="CentOS Linux"
[2026-03-13 09:20:14] VERSION="7 (Core)"
[2026-03-13 09:20:14] ID="centos"
[2026-03-13 09:20:14] ID_LIKE="rhel fedora"
[2026-03-13 09:20:14] VERSION_ID="7"
[2026-03-13 09:20:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 09:20:14] ANSI_COLOR="0;31"
[2026-03-13 09:20:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 09:20:14] HOME_URL="https://www.centos.org/"
[2026-03-13 09:20:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 09:20:14] 
[2026-03-13 09:20:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 09:20:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 09:20:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 09:20:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 09:20:14] 
[2026-03-13 09:20:14] 2026-03-13 08:19:32,664 | INFO     | **************************************
[2026-03-13 09:20:14] 2026-03-13 08:19:33,168 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-13 09:20:14] 2026-03-13 08:19:33,339 | INFO     | sufficient remaining disk space (495024340992 B)
[2026-03-13 09:20:14] 2026-03-13 08:19:33,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 09:20:14] 2026-03-13 08:19:33,340 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 09:20:14] 2026-03-13 08:19:33,340 | INFO     | update_server=False
[2026-03-13 09:20:14] 2026-03-13 08:19:33,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 09:20:14] 2026-03-13 08:19:33,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 09:20:14] 2026-03-13 08:19:33,383 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 09:20:14] 2026-03-13 08:19:33,384 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 09:20:14] 2026-03-13 08:19:33,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:20:14] 2026-03-13 08:19:33,384 | INFO     | will abort loop
[2026-03-13 09:20:14] 2026-03-13 08:19:33,708 | INFO     | all payload control threads have been joined
[2026-03-13 09:20:14] 2026-03-13 08:19:34,336 | INFO     | all data control threads have been joined
[2026-03-13 09:20:14] 2026-03-13 08:19:34,346 | INFO     | [job] retrieve thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:34,391 | INFO     | [job] job monitor thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:34,527 | INFO     | all job control threads have been joined
[2026-03-13 09:20:14] 2026-03-13 08:19:34,615 | INFO     | [payload] failed_post thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:34,715 | INFO     | [payload] control thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:34,878 | INFO     | [data] copytool_in thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:34,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:20:14] 2026-03-13 08:19:34,928 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,015 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,101 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,343 | INFO     | [data] control thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,348 | INFO     | [data] copytool_out thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,381 | INFO     | [job] validate thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,533 | INFO     | [job] control thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 09:20:14] 2026-03-13 08:19:35,687 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,891 | INFO     | [payload] validate_post thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:35,894 | INFO     | [job] queue monitor thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:19:39,550 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 09:20:14] 2026-03-13 08:20:03,982 | INFO     | PID=5661 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 09:20:14] 2026-03-13 08:20:03,983 | INFO     | .. there are 9 such processes running
[2026-03-13 09:20:14] 2026-03-13 08:20:03,984 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 09:20:14] 2026-03-13 08:20:03,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 09:20:14] 2026-03-13 08:20:03,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 09:20:14] 2026-03-13 08:20:06,731 | INFO     | [monitor] cgroup control has ended
[2026-03-13 09:20:14] 2026-03-13 08:20:07,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557684782912)>', '<ExcThread(monitor, started 140557166835456)>']
[2026-03-13 09:20:14] 2026-03-13 08:20:08,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 09:20:14] 2026-03-13 08:20:08,008 | INFO     | [monitor] control thread has ended
[2026-03-13 09:20:14] 2026-03-13 08:20:12,705 | INFO     | all workflow threads have been joined
[2026-03-13 09:20:14] 2026-03-13 08:20:12,706 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 09:20:14] 2026-03-13 08:20:12,706 | INFO     | traces error code: 0
[2026-03-13 09:20:14] 2026-03-13 08:20:12,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 09:20:14] 2026-03-13 08:20:12,879 [wrapper] ==== pilot stdout END ====
[2026-03-13 09:20:14] 2026-03-13 08:20:12,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 09:20:14] 2026-03-13 08:20:12,891 [wrapper] pilotpid: 5661
[2026-03-13 09:20:14] 2026-03-13 08:20:12,895 [wrapper] Pilot exit status: 0
[2026-03-13 09:20:14] 2026-03-13 08:20:12,929 [wrapper] pandaids: 7051693690
[2026-03-13 09:20:14] 2026-03-13 08:20:12,969 [wrapper] cleanup supervisor_pilot 19113 5662
[2026-03-13 09:20:14] 2026-03-13 08:20:12,988 [wrapper] Test setup, not cleaning
[2026-03-13 09:20:14] 2026-03-13 08:20:12,996 [wrapper] apfmon messages muted
[2026-03-13 09:20:14] 2026-03-13 08:20:13,002 [wrapper] ==== wrapper stdout END ====
[2026-03-13 09:20:14] 2026-03-13 08:20:13,009 [wrapper] ==== wrapper stderr END ====
[2026-03-13 09:20:14]  *** Error codes and diagnostics ***
[2026-03-13 09:20:14]     "exeErrorCode": 0,
[2026-03-13 09:20:14]     "exeErrorDiag": "",
[2026-03-13 09:20:14]     "pilotErrorCode": 0,
[2026-03-13 09:20:14]     "pilotErrorDiag": "",
[2026-03-13 09:20:14]  *** Listing of results directory ***
[2026-03-13 09:20:14] total 425372
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc    585013 Mar 12 11:55 pilot3.tar.gz
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc      5111 Mar 12 12:24 queuedata.json
[2026-03-13 09:20:14] -rwx------. 1 boinc boinc     36322 Mar 12 12:24 runpilot2-wrapper.sh
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc       100 Mar 13 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 09:20:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 04:24 run_atlas
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc       105 Mar 13 04:24 job.xml
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc      6391 Mar 13 04:24 init_data.xml
[2026-03-13 09:20:14] -rw-r--r--. 2 boinc boinc 218111942 Mar 13 04:24 EVNT.48967092._000185.pool.root.1
[2026-03-13 09:20:14] -rw-r--r--. 2 boinc boinc     15845 Mar 13 04:24 start_atlas.sh
[2026-03-13 09:20:14] drwxrwx--x. 2 boinc boinc        68 Mar 13 04:24 shared
[2026-03-13 09:20:14] -rw-r--r--. 2 boinc boinc    597536 Mar 13 04:24 input.tar.gz
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc         0 Mar 13 04:24 boinc_lockfile
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc      2597 Mar 13 04:25 pandaJob.out
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc       415 Mar 13 04:30 workernode_map.json
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc   1006514 Mar 13 04:30 agis_schedconf.cvmfs.json
[2026-03-13 09:20:14] drwx------. 5 boinc boinc      4096 Mar 13 04:30 pilot3
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc 207701341 Mar 13 09:18 HITS.48967094._007214.pool.root.1
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc       530 Mar 13 09:18 boinc_task_state.xml
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc      1014 Mar 13 09:19 memory_monitor_summary.json
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc   1511578 Mar 13 09:19 agis_ddmendpoints.agis.ALL.json
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc    514519 Mar 13 09:19 log.48967094._007214.job.log.tgz.1
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc      6315 Mar 13 09:19 heartbeat.json
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc      8192 Mar 13 09:19 boinc_mmap_file
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc        28 Mar 13 09:19 wrapper_checkpoint.txt
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc        95 Mar 13 09:20 pilot_heartbeat.json
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc      5066 Mar 13 09:20 pilotlog.txt
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc   2410733 Mar 13 09:20 log.48967094._007214.job.log.1
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc       357 Mar 13 09:20 output.list
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc       620 Mar 13 09:20 runtime_log
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc   2938880 Mar 13 09:20 result.tar.gz
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc      8832 Mar 13 09:20 runtime_log.err
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc       655 Mar 13 09:20 LvXLDmrKtK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3fmLDminmUFn.diag
[2026-03-13 09:20:14] -rw-r--r--. 1 boinc boinc     20732 Mar 13 09:20 stderr.txt
[2026-03-13 09:20:14] HITS file was successfully produced:
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc 207701341 Mar 13 09:18 shared/HITS.pool.root.1
[2026-03-13 09:20:14]  *** Contents of shared directory: ***
[2026-03-13 09:20:14] total 419308
[2026-03-13 09:20:14] -rw-r--r--. 2 boinc boinc 218111942 Mar 13 04:24 ATLAS.root_0
[2026-03-13 09:20:14] -rw-r--r--. 2 boinc boinc     15845 Mar 13 04:24 start_atlas.sh
[2026-03-13 09:20:14] -rw-r--r--. 2 boinc boinc    597536 Mar 13 04:24 input.tar.gz
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc 207701341 Mar 13 09:18 HITS.pool.root.1
[2026-03-13 09:20:14] -rw-------. 1 boinc boinc   2938880 Mar 13 09:20 result.tar.gz
09:20:15 (1571): run_atlas exited; CPU time 67385.312908
09:20:15 (1571): called boinc_finish(0)

</stderr_txt>
]]>

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