Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-12 20:57:31 (4020): vboxwrapper version 26210
2026-03-12 20:57:31 (4020): BOINC client version: 7.16.20
2026-03-12 20:57:37 (4020): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2026-03-12 20:57:38 (4020): Successfully copied 'init_data.xml' to the shared directory.
2026-03-12 20:57:38 (4020): Create VM. (boinc_0852d818671027ed, slot#0)
2026-03-12 20:57:39 (4020): Setting Memory Size for VM. (4600MB)
2026-03-12 20:57:39 (4020): Setting CPU Count for VM. (6)
2026-03-12 20:57:39 (4020): Setting Chipset Options for VM.
2026-03-12 20:57:39 (4020): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-12 20:57:40 (4020): Setting Boot Options for VM.
2026-03-12 20:57:40 (4020): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-12 20:57:40 (4020): Enabling VM Network Access.
2026-03-12 20:57:41 (4020): Disabling USB Support for VM.
2026-03-12 20:57:41 (4020): Disabling COM Port Support for VM.
2026-03-12 20:57:41 (4020): Disabling LPT Port Support for VM.
2026-03-12 20:57:41 (4020): Disabling Audio Support for VM.
2026-03-12 20:57:42 (4020): Disabling Clipboard Support for VM.
2026-03-12 20:57:42 (4020): Disabling Drag and Drop Support for VM.
2026-03-12 20:57:42 (4020): Adding storage controller(s) to VM.
2026-03-12 20:57:43 (4020): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-12 20:57:44 (4020): Adding VirtualBox Guest Additions to VM.
2026-03-12 20:57:44 (4020): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-12 20:57:44 (4020): forwarding host port 58557 to guest port 80
2026-03-12 20:57:44 (4020): Enabling remote desktop for VM.
2026-03-12 20:57:45 (4020): Required extension pack not installed, remote desktop not enabled.
2026-03-12 20:57:45 (4020): Enabling shared directory for VM.
2026-03-12 20:57:45 (4020): Starting VM using VBoxManage interface. (boinc_0852d818671027ed, slot#0)
2026-03-12 20:57:53 (4020): Successfully started VM. (PID = '15684')
2026-03-12 20:57:53 (4020): Reporting VM Process ID to BOINC.
2026-03-12 20:57:53 (4020): Guest Log: BIOS: VirtualBox 6.1.40
2026-03-12 20:57:53 (4020): Guest Log: CPUID EDX: 0x178bfbff
2026-03-12 20:57:53 (4020): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-12 20:57:53 (4020): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-12 20:57:53 (4020): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-12 20:57:53 (4020): Detected: Web Application Enabled (http://localhost:58557)
2026-03-12 20:57:53 (4020): Preference change detected
2026-03-12 20:57:53 (4020): Setting CPU throttle for VM. (85%)
2026-03-12 20:57:53 (4020): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-12 20:57:55 (4020): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-12 20:57:55 (4020): Guest Log: BIOS: Booting from Hard Disk...
2026-03-12 20:57:59 (4020): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-12 20:57:59 (4020): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-12 20:57:59 (4020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-12 20:58:09 (4020): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-12 20:58:09 (4020): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-12 20:58:20 (4020): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000198 main     Log opened 2026-03-12T20:58:18.378031000Z
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000329 main     OS Product: Linux
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000377 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000421 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000520 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000522 main     Process ID: 1339
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.000523 main     Package type: LINUX_64BITS_GENERIC
2026-03-12 20:58:20 (4020): Guest Log: 00:00:00.002528 main     5.2.32 r132073 started. Verbose level = 0
2026-03-12 20:58:20 (4020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-12 20:58:20 (4020): Guest Log: [INFO] Mounting shared directory
2026-03-12 20:58:20 (4020): Guest Log: [INFO] Checking for init_data.xml
2026-03-12 20:58:30 (4020): Guest Log: 00:00:10.016450 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 277 003 000ns (GuestNow=1 773 316 710 105 583 000 ns GuestLast=1 773 349 098 382 586 000 ns fSetTimeLastLoop=true )
2026-03-12 20:58:32 (4020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-12 20:58:32 (4020): Guest Log: [INFO] Detected branch: prod
2026-03-12 20:58:33 (4020): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-12 20:58:33 (4020): Guest Log: Copying input files
2026-03-12 20:58:35 (4020): Guest Log: Copied input files into RunAtlas.
2026-03-12 20:58:36 (4020): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-12 20:58:36 (4020): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-12 20:58:36 (4020): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-12 20:58:36 (4020): Guest Log: Further information can be found at the LHC@home message board.
2026-03-12 20:59:07 (4020): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-12 20:59:08 (4020): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-12 20:59:08 (4020): Guest Log: 2.6.3.0 1618 0 32164 157199 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-12 20:59:09 (4020): Guest Log: copied the webapp to /var/www
2026-03-12 20:59:10 (4020): Guest Log: ATHENA_PROC_NUMBER=6
2026-03-12 20:59:10 (4020): Guest Log: ATHENA_CORE_NUMBER=6
2026-03-12 20:59:10 (4020): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-12 20:59:10 (4020): Guest Log:  *** Starting ATLAS job. (PandaID=7037292794 taskID=48700874) ***
2026-03-12 22:37:58 (4020): Status Report: Elapsed Time: '6000.000000'
2026-03-12 22:37:58 (4020): Status Report: CPU Time: '21976.984375'
2026-03-13 00:18:02 (4020): Status Report: Elapsed Time: '12000.000000'
2026-03-13 00:18:02 (4020): Status Report: CPU Time: '50624.187500'
2026-03-13 01:58:07 (4020): Status Report: Elapsed Time: '18000.000000'
2026-03-13 01:58:07 (4020): Status Report: CPU Time: '79248.015625'
2026-03-13 02:15:21 (4020): Guest Log:  *** Job finished ***
2026-03-13 02:15:21 (4020): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:02,446 | INFO     | all workflow threads have been joined
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:02,446 | INFO     | end of generic workflow (traces error code: 0)
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:02,447 | INFO     | traces error code: 0
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:02,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,153 | INFO     | PID=6076 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,155 | INFO     | found 0 job(s) in 20 queues
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,156 | INFO     | [monitor] control thread has ended
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,299 [wrapper] ==== pilot stdout END ====
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,307 [wrapper] ==== wrapper stdout RESUME ====
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,315 [wrapper] pilotpid: 6076
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,323 [wrapper] Pilot exit status: 0
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,744 [wrapper] pandaids: 7037292794
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,833 [wrapper] cleanup supervisor_pilot 28935 6077
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,846 [wrapper] Test setup, not cleaning
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,855 [wrapper] apfmon messages muted
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,863 [wrapper] ==== wrapper stdout END ====
2026-03-13 02:15:21 (4020): Guest Log: 2026-03-12 17:15:19,872 [wrapper] ==== wrapper stderr END ====
2026-03-13 02:15:21 (4020): Guest Log:  *** Error codes and diagnostics ***
2026-03-13 02:15:21 (4020): Guest Log:     "exeErrorCode": 0,
2026-03-13 02:15:21 (4020): Guest Log:     "exeErrorDiag": "",
2026-03-13 02:15:21 (4020): Guest Log:     "pilotErrorCode": 0,
2026-03-13 02:15:21 (4020): Guest Log:     "pilotErrorDiag": "",
2026-03-13 02:15:21 (4020): Guest Log:  *** Listing of results directory ***
2026-03-13 02:15:21 (4020): Guest Log: total 153056
2026-03-13 02:15:21 (4020): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  4 07:36 pilot3.tar.gz
2026-03-13 02:15:21 (4020): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  4 07:38 queuedata.json
2026-03-13 02:15:21 (4020): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  4 07:39 runpilot2-wrapper.sh
2026-03-13 02:15:21 (4020): Guest Log: -rwxr-xr-x. 1 atlas atlas      5943 Mar 12 11:58 init_data.xml
2026-03-13 02:15:21 (4020): Guest Log: -rwxr-xr-x. 1 atlas atlas    597959 Mar 12 11:58 input.tar.gz
2026-03-13 02:15:21 (4020): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 12 11:58 start_atlas.sh
2026-03-13 02:15:21 (4020): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 12 11:58 EVNT.48700872._000054.pool.root.1 -> /data/./ATLAS.root_0
2026-03-13 02:15:21 (4020): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Mar 12 11:59 pandaJob.out
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas   1006241 Mar 12 12:01 agis_schedconf.cvmfs.json
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas       437 Mar 12 12:02 workernode_map.json
2026-03-13 02:15:21 (4020): Guest Log: drwx------. 5 atlas atlas      4096 Mar 12 12:02 pilot3
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas 146761965 Mar 12 17:13 HITS.48700874._001398.pool.root.1
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas      1031 Mar 12 17:14 memory_monitor_summary.json
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 12 17:14 agis_ddmendpoints.agis.ALL.json
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas    498984 Mar 12 17:14 log.48700874._001398.job.log.tgz.1
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas      6383 Mar 12 17:14 heartbeat.json
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas        95 Mar 12 17:15 pilot_heartbeat.json
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas       744 Mar 12 17:15 pilotlog.txt
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas   2556082 Mar 12 17:15 log.48700874._001398.job.log.1
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas       357 Mar 12 17:15 output.list
2026-03-13 02:15:21 (4020): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 12 17:15 runtime_log
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas   3072000 Mar 12 17:15 result.tar.gz
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas       671 Mar 12 17:15 v4TMDms0vH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5kHLDmp9Zc8m.diag
2026-03-13 02:15:21 (4020): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Mar 12 17:15 runtime_log.err
2026-03-13 02:15:21 (4020): Guest Log: Looking for outputfile HITS.48700874._001398.pool.root.1
2026-03-13 02:15:21 (4020): Guest Log: HITS file was successfully produced
2026-03-13 02:15:21 (4020): Guest Log: -rw-------. 1 atlas atlas 146761965 Mar 12 17:13 /home/atlas/RunAtlas/HITS.48700874._001398.pool.root.1
2026-03-13 02:15:22 (4020): Guest Log: Successfully finished the ATLAS job!
2026-03-13 02:15:22 (4020): Guest Log: Copying the results back to the shared directory!
2026-03-13 02:15:23 (4020): Guest Log:  *** Contents of shared directory: ***
2026-03-13 02:15:23 (4020): Guest Log: total 334996
2026-03-13 02:15:23 (4020): Guest Log: -rwxrwxrwx. 1 root root 192577265 Mar 12 11:57 ATLAS.root_0
2026-03-13 02:15:23 (4020): Guest Log: -rwxrwxrwx. 1 root root 146761965 Mar 12 17:15 HITS.pool.root.1
2026-03-13 02:15:23 (4020): Guest Log: -rwxrwxrwx. 1 root root      5943 Mar 12 11:57 init_data.xml
2026-03-13 02:15:23 (4020): Guest Log: -rwxrwxrwx. 1 root root    597959 Mar 12 11:37 input.tar.gz
2026-03-13 02:15:23 (4020): Guest Log: -rwxrwxrwx. 1 root root   3072000 Mar 12 17:15 result.tar.gz
2026-03-13 02:15:23 (4020): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 12 11:37 start_atlas.sh
2026-03-13 02:15:23 (4020): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-13 02:15:23 (4020): VM Completion File Detected.
2026-03-13 02:15:23 (4020): Powering off VM.
2026-03-13 02:15:24 (4020): Successfully stopped VM.
2026-03-13 02:15:24 (4020): Deregistering VM. (boinc_0852d818671027ed, slot#0)
2026-03-13 02:15:25 (4020): Removing network bandwidth throttle group from VM.
2026-03-13 02:15:25 (4020): Removing VM from VirtualBox.
2026-03-13 02:15:30 (4020): called boinc_finish(0)

</stderr_txt>
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