Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:36:20 (11909): wrapper (7.7.26015): starting
07:36:20 (11909): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 07:36:20] Arguments: --nthreads 8
[2026-03-12 07:36:20] Threads: 8
[2026-03-12 07:36:20] Checking for CVMFS
[2026-03-12 07:36:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 07:36:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 07:36:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 07:36:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 07:36:21] 2.11.2.0 2877 211627 79244 157199 3 50 14008515 20275201 1 130560 0 56727954 99.883 12794068 29346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 07:36:21] CVMFS is ok
[2026-03-12 07:36:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 07:36:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 07:36:21] Further information can be found at the LHC@home message board.
[2026-03-12 07:36:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 07:36:21] Checking for apptainer binary...
[2026-03-12 07:36:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 07:36:21] Running /usr/bin/apptainer --version
[2026-03-12 07:36:21] apptainer version 1.3.2-1.el7
[2026-03-12 07:36:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 07:36:23] c-204-32.aglt2.org
[2026-03-12 07:36:23] apptainer works
[2026-03-12 07:36:23] Set ATHENA_PROC_NUMBER=8
[2026-03-12 07:36:23] Set ATHENA_CORE_NUMBER=8
[2026-03-12 07:36:23] Starting ATLAS job with PandaID=7037240686
[2026-03-12 07:36:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 09:33:03]  *** The last 200 lines of the pilot log: ***
[2026-03-12 09:33:03] 2026-03-12 13:31:55,602 | INFO     | time since job start (6908s) is within the limit (349056.0s)
[2026-03-12 09:33:03] 2026-03-12 13:31:56,062 | INFO     | monitor loop #520: job 0:7037240686 is in state 'finished'
[2026-03-12 09:33:03] 2026-03-12 13:31:56,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,182 | INFO     | job 7037240686 has state=finished
[2026-03-12 09:33:03] 2026-03-12 13:31:57,188 | INFO     | preparing for final server update for job 7037240686 in state='finished'
[2026-03-12 09:33:03] 2026-03-12 13:31:57,189 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037240686/jobReport.json
[2026-03-12 09:33:03] 2026-03-12 13:31:57,194 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 09:33:03] 2026-03-12 13:31:57,195 | INFO     | this job has now completed (state=finished)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,195 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,195 | INFO     | log transfer has been attempted: DONE
[2026-03-12 09:33:03] 2026-03-12 13:31:57,195 | INFO     | job 7037240686 has finished - writing final server update
[2026-03-12 09:33:03] 2026-03-12 13:31:57,196 | INFO     | total number of processed events: 400 (read)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,198 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037240686/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,199 | INFO     | extracted standard info from prmon json
[2026-03-12 09:33:03] 2026-03-12 13:31:57,199 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 09:33:03] 2026-03-12 13:31:57,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 09:33:03] 2026-03-12 13:31:57,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 09:33:03] 2026-03-12 13:31:57,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 09:33:03] 2026-03-12 13:31:57,203 | INFO     | fitting pss+swap vs Time
[2026-03-12 09:33:03] 2026-03-12 13:31:57,203 | INFO     | sum of square deviations: 447383272.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,204 | INFO     | sum of deviations: 2971421263.999997
[2026-03-12 09:33:03] 2026-03-12 13:31:57,204 | INFO     | mean x: 1773318849.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,204 | INFO     | mean y: 2546018.017699115
[2026-03-12 09:33:03] 2026-03-12 13:31:57,204 | INFO     | intersect: -11775447629.832863
[2026-03-12 09:33:03] 2026-03-12 13:31:57,204 | INFO     | chi2: 1.6090249382018866
[2026-03-12 09:33:03] 2026-03-12 13:31:57,205 | INFO     | sum of square deviations: 390582207.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,205 | INFO     | sum of deviations: 3050748500.500002
[2026-03-12 09:33:03] 2026-03-12 13:31:57,206 | INFO     | mean x: 1773318696.5
[2026-03-12 09:33:03] 2026-03-12 13:31:57,206 | INFO     | mean y: 2546231.157407407
[2026-03-12 09:33:03] 2026-03-12 13:31:57,206 | INFO     | intersect: -13848441492.551146
[2026-03-12 09:33:03] 2026-03-12 13:31:57,206 | INFO     | chi2: 1.6113718185730979
[2026-03-12 09:33:03] 2026-03-12 13:31:57,206 | INFO     | current chi2=1.6113718185730979 (change=-0.14585730248742468 %)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,206 | INFO     | right removable region: 107
[2026-03-12 09:33:03] 2026-03-12 13:31:57,207 | INFO     | sum of square deviations: 390582207.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,207 | INFO     | sum of deviations: -14437218066.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,207 | INFO     | mean x: 1773319001.5
[2026-03-12 09:33:03] 2026-03-12 13:31:57,207 | INFO     | mean y: 2591817.4814814813
[2026-03-12 09:33:03] 2026-03-12 13:31:57,208 | INFO     | intersect: 65550362981.66276
[2026-03-12 09:33:03] 2026-03-12 13:31:57,208 | INFO     | chi2: 0.09404951032414163
[2026-03-12 09:33:03] 2026-03-12 13:31:57,208 | INFO     | current chi2=0.09404951032414163 (change=94.15487553417017 %)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,208 | INFO     | sum of square deviations: 338804492.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,209 | INFO     | sum of deviations: -11751843614.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,209 | INFO     | mean x: 1773319154.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,209 | INFO     | mean y: 2583870.6213592235
[2026-03-12 09:33:03] 2026-03-12 13:31:57,209 | INFO     | intersect: 61512303687.201546
[2026-03-12 09:33:03] 2026-03-12 13:31:57,209 | INFO     | chi2: 0.0916710210452558
[2026-03-12 09:33:03] 2026-03-12 13:31:57,209 | INFO     | current chi2=0.0916710210452558 (change=2.528975717883448 %)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,210 | INFO     | left removable region: 20
[2026-03-12 09:33:03] 2026-03-12 13:31:57,210 | INFO     | sum of square deviations: 204163828.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,210 | INFO     | sum of deviations: -4554713168.999999
[2026-03-12 09:33:03] 2026-03-12 13:31:57,210 | INFO     | mean x: 1773319276.0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,210 | INFO     | mean y: 2561609.83908046
[2026-03-12 09:33:03] 2026-03-12 13:31:57,211 | INFO     | intersect: 39563735292.56776
[2026-03-12 09:33:03] 2026-03-12 13:31:57,211 | INFO     | chi2: 0.060339134788530605
[2026-03-12 09:33:03] 2026-03-12 13:31:57,211 | INFO     | current memory leak: -22.31 B/s (using 87 data points, chi2=0.06)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,211 | INFO     | could have reported an average CPU frequency of 1779 MHz (7 samples)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | ..............................
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . Timing measurements:
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . get job = 0 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . initial setup = 8 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . payload setup = 8 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . stage-in = 0 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . payload execution = 6879 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,212 | INFO     | . stage-out = 0 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,213 | INFO     | . log creation = 0 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,213 | INFO     | ..............................
[2026-03-12 09:33:03] 2026-03-12 13:31:57,313 | INFO     | 
[2026-03-12 09:33:03] 2026-03-12 13:31:57,314 | INFO     | job summary report
[2026-03-12 09:33:03] 2026-03-12 13:31:57,314 | INFO     | --------------------------------------------------
[2026-03-12 09:33:03] 2026-03-12 13:31:57,314 | INFO     | PanDA job id: 7037240686
[2026-03-12 09:33:03] 2026-03-12 13:31:57,314 | INFO     | task id: 48937795
[2026-03-12 09:33:03] 2026-03-12 13:31:57,315 | INFO     | errors: (none)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 09:33:03] 2026-03-12 13:31:57,315 | INFO     | pilot state: finished 
[2026-03-12 09:33:03] 2026-03-12 13:31:57,315 | INFO     | transexitcode: 0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,315 | INFO     | exeerrorcode: 0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,315 | INFO     | exeerrordiag: 
[2026-03-12 09:33:03] 2026-03-12 13:31:57,316 | INFO     | exitcode: 0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,316 | INFO     | exitmsg: OK
[2026-03-12 09:33:03] 2026-03-12 13:31:57,316 | INFO     | cpuconsumptiontime: 51183 s
[2026-03-12 09:33:03] 2026-03-12 13:31:57,316 | INFO     | nevents: 400
[2026-03-12 09:33:03] 2026-03-12 13:31:57,316 | INFO     | neventsw: 0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,316 | INFO     | pid: 20090
[2026-03-12 09:33:03] 2026-03-12 13:31:57,317 | INFO     | pgrp: 20090
[2026-03-12 09:33:03] 2026-03-12 13:31:57,317 | INFO     | corecount: 8
[2026-03-12 09:33:03] 2026-03-12 13:31:57,317 | INFO     | event service: False
[2026-03-12 09:33:03] 2026-03-12 13:31:57,317 | INFO     | sizes: {0: 2280198, 11: 2280198, 6892: 2307355, 6893: 2316353, 6896: 2316409, 6898: 2316603}
[2026-03-12 09:33:03] 2026-03-12 13:31:57,317 | INFO     | --------------------------------------------------
[2026-03-12 09:33:03] 2026-03-12 13:31:57,317 | INFO     | 
[2026-03-12 09:33:03] 2026-03-12 13:31:57,318 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 09:33:03] 2026-03-12 13:31:57,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,353 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 09:33:03] 2026-03-12 13:31:57,357 | INFO     | job 7037240686 has completed (purged errors)
[2026-03-12 09:33:03] 2026-03-12 13:31:57,357 | INFO     | overall cleanup function is called
[2026-03-12 09:33:03] 2026-03-12 13:31:58,366 | INFO     | --- collectZombieJob: --- 10, [20090]
[2026-03-12 09:33:03] 2026-03-12 13:31:58,366 | INFO     | zombie collector waiting for pid 20090
[2026-03-12 09:33:03] 2026-03-12 13:31:58,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 09:33:03] 2026-03-12 13:31:58,366 | INFO     | collected zombie processes
[2026-03-12 09:33:03] 2026-03-12 13:31:58,366 | INFO     | will attempt to kill all subprocesses of pid=20090
[2026-03-12 09:33:03] 2026-03-12 13:31:58,454 | INFO     | process IDs to be killed: [20090] (in reverse order)
[2026-03-12 09:33:03] 2026-03-12 13:31:58,513 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 09:33:03] 2026-03-12 13:31:58,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 09:33:03] 2026-03-12 13:31:58,519 | INFO     | did not find any defunct processes belonging to 20090
[2026-03-12 09:33:03] 2026-03-12 13:31:58,522 | INFO     | did not find any defunct processes belonging to 20090
[2026-03-12 09:33:03] 2026-03-12 13:31:58,523 | INFO     | ready for new job
[2026-03-12 09:33:03] 2026-03-12 13:31:58,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 09:33:03] 2026-03-12 13:31:58,525 | INFO     | **************************************
[2026-03-12 09:33:03] 2026-03-12 13:31:58,525 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 09:33:03] 2026-03-12 13:31:58,526 | INFO     | **************************************
[2026-03-12 09:33:03] 2026-03-12 13:31:58,526 | INFO     | 
[2026-03-12 09:33:03] 2026-03-12 13:31:58,526 | INFO     | architecture information:
[2026-03-12 09:33:03] 2026-03-12 13:31:58,527 | INFO     | executing command: cat /etc/os-release
[2026-03-12 09:33:03] 2026-03-12 13:31:58,546 | INFO     | cat /etc/os-release:
[2026-03-12 09:33:03] NAME="CentOS Linux"
[2026-03-12 09:33:03] VERSION="7 (Core)"
[2026-03-12 09:33:03] ID="centos"
[2026-03-12 09:33:03] ID_LIKE="rhel fedora"
[2026-03-12 09:33:03] VERSION_ID="7"
[2026-03-12 09:33:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 09:33:03] ANSI_COLOR="0;31"
[2026-03-12 09:33:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 09:33:03] HOME_URL="https://www.centos.org/"
[2026-03-12 09:33:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 09:33:03] 
[2026-03-12 09:33:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 09:33:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 09:33:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 09:33:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 09:33:03] 
[2026-03-12 09:33:03] 2026-03-12 13:31:58,546 | INFO     | **************************************
[2026-03-12 09:33:03] 2026-03-12 13:31:59,050 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 09:33:03] 2026-03-12 13:31:59,072 | INFO     | sufficient remaining disk space (18454937600 B)
[2026-03-12 09:33:03] 2026-03-12 13:31:59,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 09:33:03] 2026-03-12 13:31:59,073 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 09:33:03] 2026-03-12 13:31:59,073 | INFO     | update_server=False
[2026-03-12 09:33:03] 2026-03-12 13:31:59,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 09:33:03] 2026-03-12 13:31:59,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 09:33:03] 2026-03-12 13:31:59,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 09:33:03] 2026-03-12 13:31:59,573 | INFO     | aborting loop
[2026-03-12 09:33:03] 2026-03-12 13:31:59,723 | INFO     | all payload control threads have been joined
[2026-03-12 09:33:03] 2026-03-12 13:32:00,036 | INFO     | all data control threads have been joined
[2026-03-12 09:33:03] 2026-03-12 13:32:00,078 | INFO     | [job] queue monitor thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,079 | INFO     | [job] retrieve thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 09:33:03] 2026-03-12 13:32:00,148 | INFO     | [payload] validate_post thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,251 | INFO     | all job control threads have been joined
[2026-03-12 09:33:03] 2026-03-12 13:32:00,578 | INFO     | [job] job monitor thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,648 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,723 | INFO     | [payload] control thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:00,788 | INFO     | [job] validate thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:01,042 | INFO     | [data] control thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:01,131 | INFO     | [payload] failed_post thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:01,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 09:33:03] 2026-03-12 13:32:01,256 | INFO     | [job] control thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:01,336 | INFO     | [data] copytool_in thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:01,485 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:01,487 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:02,136 | INFO     | [data] copytool_out thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:05,184 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 09:33:03] 2026-03-12 13:32:28,810 | INFO     | PID=15666 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 09:33:03] 2026-03-12 13:32:28,811 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 09:33:03] 2026-03-12 13:32:28,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 09:33:03] 2026-03-12 13:32:28,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 09:33:03] 2026-03-12 13:32:58,087 | INFO     | [monitor] cgroup control has ended
[2026-03-12 09:33:03] 2026-03-12 13:32:58,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625623979840)>', '<ExcThread(monitor, started 139624773031680)>']
[2026-03-12 09:33:03] 2026-03-12 13:32:58,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 09:33:03] 2026-03-12 13:32:58,954 | INFO     | [monitor] control thread has ended
[2026-03-12 09:33:03] 2026-03-12 13:33:03,150 | INFO     | all workflow threads have been joined
[2026-03-12 09:33:03] 2026-03-12 13:33:03,150 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 09:33:03] 2026-03-12 13:33:03,159 | INFO     | traces error code: 0
[2026-03-12 09:33:03] 2026-03-12 13:33:03,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 09:33:03] 2026-03-12 13:33:03,293 [wrapper] ==== pilot stdout END ====
[2026-03-12 09:33:03] 2026-03-12 13:33:03,298 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 09:33:03] 2026-03-12 13:33:03,303 [wrapper] pilotpid: 15666
[2026-03-12 09:33:03] 2026-03-12 13:33:03,308 [wrapper] Pilot exit status: 0
[2026-03-12 09:33:03] 2026-03-12 13:33:03,326 [wrapper] pandaids: 7037240686
[2026-03-12 09:33:03] 2026-03-12 13:33:03,375 [wrapper] cleanup supervisor_pilot 27755 15667
[2026-03-12 09:33:03] 2026-03-12 13:33:03,379 [wrapper] Test setup, not cleaning
[2026-03-12 09:33:03] 2026-03-12 13:33:03,383 [wrapper] apfmon messages muted
[2026-03-12 09:33:03] 2026-03-12 13:33:03,388 [wrapper] ==== wrapper stdout END ====
[2026-03-12 09:33:03] 2026-03-12 13:33:03,392 [wrapper] ==== wrapper stderr END ====
[2026-03-12 09:33:03]  *** Error codes and diagnostics ***
[2026-03-12 09:33:03]     "exeErrorCode": 0,
[2026-03-12 09:33:03]     "exeErrorDiag": "",
[2026-03-12 09:33:03]     "pilotErrorCode": 0,
[2026-03-12 09:33:03]     "pilotErrorDiag": "",
[2026-03-12 09:33:03]  *** Listing of results directory ***
[2026-03-12 09:33:03] total 438984
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 23:50 queuedata.json
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 23:50 pilot3.tar.gz
[2026-03-12 09:33:03] -rwx------ 1 boincer umatlas     36322 Mar  3 23:51 runpilot2-wrapper.sh
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas       100 Mar 12 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 09:33:03] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 07:36 run_atlas
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas       105 Mar 12 07:36 job.xml
[2026-03-12 09:33:03] -rw-r--r-- 2 boincer umatlas 260646248 Mar 12 07:36 EVNT.48564734._000007.pool.root.1
[2026-03-12 09:33:03] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 07:36 start_atlas.sh
[2026-03-12 09:33:03] drwxrwx--x 2 boincer umatlas      4096 Mar 12 07:36 shared
[2026-03-12 09:33:03] -rw-r--r-- 2 boincer umatlas    597942 Mar 12 07:36 input.tar.gz
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas         0 Mar 12 07:36 boinc_lockfile
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas      2541 Mar 12 07:36 pandaJob.out
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas        57 Mar 12 07:36 setup.sh.local
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas   1006241 Mar 12 07:36 agis_schedconf.cvmfs.json
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas   1511578 Mar 12 07:36 agis_ddmendpoints.agis.ALL.json
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas       433 Mar 12 07:36 workernode_map.json
[2026-03-12 09:33:03] drwx------ 5 boincer umatlas      4096 Mar 12 07:36 pilot3
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas      5909 Mar 12 09:30 init_data.xml
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas 182265043 Mar 12 09:31 HITS.48937795._000161.pool.root.1
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas       529 Mar 12 09:31 boinc_task_state.xml
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas      1048 Mar 12 09:31 memory_monitor_summary.json
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas    354834 Mar 12 09:31 log.48937795._000161.job.log.tgz.1
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas      6397 Mar 12 09:31 heartbeat.json
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas        95 Mar 12 09:32 pilot_heartbeat.json
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 09:32 boinc_mmap_file
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas        27 Mar 12 09:32 wrapper_checkpoint.txt
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas      4742 Mar 12 09:33 pilotlog.txt
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas    977877 Mar 12 09:33 log.48937795._000161.job.log.1
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas       357 Mar 12 09:33 output.list
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas       620 Mar 12 09:33 runtime_log
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas   1351680 Mar 12 09:33 result.tar.gz
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas       658 Mar 12 09:33 ZEcLDmjNtH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzMJLDma1EAkn.diag
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas      9341 Mar 12 09:33 runtime_log.err
[2026-03-12 09:33:03] -rw-r--r-- 1 boincer umatlas     21253 Mar 12 09:33 stderr.txt
[2026-03-12 09:33:03] HITS file was successfully produced:
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas 182265043 Mar 12 09:31 shared/HITS.pool.root.1
[2026-03-12 09:33:03]  *** Contents of shared directory: ***
[2026-03-12 09:33:03] total 434464
[2026-03-12 09:33:03] -rw-r--r-- 2 boincer umatlas 260646248 Mar 12 07:36 ATLAS.root_0
[2026-03-12 09:33:03] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 07:36 start_atlas.sh
[2026-03-12 09:33:03] -rw-r--r-- 2 boincer umatlas    597942 Mar 12 07:36 input.tar.gz
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas 182265043 Mar 12 09:31 HITS.pool.root.1
[2026-03-12 09:33:03] -rw------- 1 boincer umatlas   1351680 Mar 12 09:33 result.tar.gz
09:33:05 (11909): run_atlas exited; CPU time 51128.681813
09:33:05 (11909): called boinc_finish(0)

</stderr_txt>
]]>

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