Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:26:36 (1295563): wrapper (7.7.26015): starting
06:26:36 (1295563): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 06:26:36] Arguments: --nthreads 8
[2026-03-12 06:26:36] Threads: 8
[2026-03-12 06:26:36] Checking for CVMFS
[2026-03-12 06:26:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 06:26:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 06:26:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 06:26:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 06:26:36] 2.13.0.0 779828 282 52128 157202 2 187 4075294 6144000 10684 130560 0 1277208 99.997 14215 1065 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-12 06:26:36] CVMFS is ok
[2026-03-12 06:26:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 06:26:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-12 06:26:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-12 06:26:36] Further information can be found at the LHC@home message board.
[2026-03-12 06:26:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:26:36] Checking for apptainer binary...
[2026-03-12 06:26:36] apptainer is not installed, using version from CVMFS
[2026-03-12 06:26:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:26:37] mz32
[2026-03-12 06:26:37] apptainer works
[2026-03-12 06:26:37] Set ATHENA_PROC_NUMBER=8
[2026-03-12 06:26:37] Set ATHENA_CORE_NUMBER=8
[2026-03-12 06:26:37] Starting ATLAS job with PandaID=7037479537
[2026-03-12 06:26:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 07:52:12]  *** The last 200 lines of the pilot log: ***
[2026-03-12 07:52:12]  workdir=None
[2026-03-12 07:52:12] ]
[2026-03-12 07:52:12] 2026-03-12 14:51:17,246 | INFO     | transferring file log.48700858._002811.job.log.tgz.1 from /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/log.48700858._002811.job.log.tgz.1 to /var/lib/boin
[2026-03-12 07:52:12] 2026-03-12 14:51:17,246 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/log.48700858._002811.job.log.tgz.1 /var/lib/boinc-client/slots/12/log.4870
[2026-03-12 07:52:12] 2026-03-12 14:51:17,271 | INFO     | adding to output.list: log.48700858._002811.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/66/log.48700858._002811.job.log.tg
[2026-03-12 07:52:12] 2026-03-12 14:51:17,272 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 07:52:12] 2026-03-12 14:51:17,272 | INFO     | summary of transferred files:
[2026-03-12 07:52:12] 2026-03-12 14:51:17,272 | INFO     |  -- lfn=log.48700858._002811.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 07:52:12] 2026-03-12 14:51:17,273 | INFO     | stage-out finished correctly
[2026-03-12 07:52:12] 2026-03-12 14:51:17,394 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 07:52:12] 2026-03-12 14:51:18,562 | INFO     | time since job start (5061s) is within the limit (349056.0s)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,164 | WARNING  | process 1320680 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 07:52:12] 2026-03-12 14:51:19,164 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,165 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,166 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 07:52:12] 2026-03-12 14:51:19,166 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 07:52:12] 2026-03-12 14:51:19,167 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3135117 B
[2026-03-12 07:52:12] 2026-03-12 14:51:19,167 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15606 B
[2026-03-12 07:52:12] 2026-03-12 14:51:19,167 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2026-03-12 07:52:12] 2026-03-12 14:51:19,193 | INFO     | sufficient remaining disk space (362660495360 B)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,194 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,195 | INFO     | size of work directory /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537: 3435888 B (within 5033164800 B limit)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,195 | INFO     | pfn file=/var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/HITS.48700858._002811.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,195 | INFO     | total size of present files: 0 B (workdir size: 3435888 B)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,195 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/HITS.48700858._002811.pool.root.1 since it does not exist
[2026-03-12 07:52:12] 2026-03-12 14:51:19,220 | INFO     | job 7037479537 has state=finished
[2026-03-12 07:52:12] 2026-03-12 14:51:19,220 | INFO     | preparing for final server update for job 7037479537 in state='finished'
[2026-03-12 07:52:12] 2026-03-12 14:51:19,225 | INFO     | reading metadata from: /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/jobReport.json
[2026-03-12 07:52:12] 2026-03-12 14:51:19,233 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/12/workernode_map.json
[2026-03-12 07:52:12] 2026-03-12 14:51:19,233 | INFO     | this job has now completed (state=finished)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,234 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,234 | INFO     | log transfer has been attempted: DONE
[2026-03-12 07:52:12] 2026-03-12 14:51:19,234 | INFO     | job 7037479537 has finished - writing final server update
[2026-03-12 07:52:12] 2026-03-12 14:51:19,237 | INFO     | total number of processed events: 400 (read)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,276 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-7037479537/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,280 | INFO     | extracted standard info from prmon json
[2026-03-12 07:52:12] 2026-03-12 14:51:19,280 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 07:52:12] 2026-03-12 14:51:19,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 07:52:12] 2026-03-12 14:51:19,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 07:52:12] 2026-03-12 14:51:19,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 07:52:12] 2026-03-12 14:51:19,283 | INFO     | fitting pss+swap vs Time
[2026-03-12 07:52:12] 2026-03-12 14:51:19,283 | INFO     | sum of square deviations: 136095575.0
[2026-03-12 07:52:12] 2026-03-12 14:51:19,284 | INFO     | sum of deviations: -1500842322.5000002
[2026-03-12 07:52:12] 2026-03-12 14:51:19,284 | INFO     | mean x: 1773324634.5
[2026-03-12 07:52:12] 2026-03-12 14:51:19,284 | INFO     | mean y: 2516028.7763157897
[2026-03-12 07:52:12] 2026-03-12 14:51:19,285 | INFO     | intersect: 19558483685.986656
[2026-03-12 07:52:12] 2026-03-12 14:51:19,285 | INFO     | chi2: 0.006990369835113967
[2026-03-12 07:52:12] 2026-03-12 14:51:19,285 | INFO     | current memory leak: -11.03 B/s (using 76 data points, chi2=0.01)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,286 | INFO     | could have reported an average CPU frequency of 1937 MHz (6 samples)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,286 | INFO     | ..............................
[2026-03-12 07:52:12] 2026-03-12 14:51:19,286 | INFO     | . Timing measurements:
[2026-03-12 07:52:12] 2026-03-12 14:51:19,286 | INFO     | . get job = 0 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,286 | INFO     | . initial setup = 9 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,287 | INFO     | . payload setup = 7 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,287 | INFO     | . stage-in = 0 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,287 | INFO     | . payload execution = 5036 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,287 | INFO     | . stage-out = 0 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,287 | INFO     | . log creation = 0 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,287 | INFO     | ..............................
[2026-03-12 07:52:12] 2026-03-12 14:51:19,418 | INFO     | 
[2026-03-12 07:52:12] 2026-03-12 14:51:19,418 | INFO     | job summary report
[2026-03-12 07:52:12] 2026-03-12 14:51:19,418 | INFO     | --------------------------------------------------
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | PanDA job id: 7037479537
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | task id: 48700858
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | errors: (none)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | pilot state: finished 
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | transexitcode: 0
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | exeerrorcode: 0
[2026-03-12 07:52:12] 2026-03-12 14:51:19,419 | INFO     | exeerrordiag: 
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | exitcode: 0
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | exitmsg: OK
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | cpuconsumptiontime: 37040 s
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | nevents: 400
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | neventsw: 0
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | pid: 1320680
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | pgrp: 1320680
[2026-03-12 07:52:12] 2026-03-12 14:51:19,420 | INFO     | corecount: 8
[2026-03-12 07:52:12] 2026-03-12 14:51:19,421 | INFO     | event service: False
[2026-03-12 07:52:12] 2026-03-12 14:51:19,421 | INFO     | sizes: {0: 2280084, 11: 2280084, 5047: 2306769, 5048: 2315839, 5050: 2316005}
[2026-03-12 07:52:12] 2026-03-12 14:51:19,421 | INFO     | --------------------------------------------------
[2026-03-12 07:52:12] 2026-03-12 14:51:19,421 | INFO     | 
[2026-03-12 07:52:12] 2026-03-12 14:51:19,421 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2026-03-12 07:52:12] 2026-03-12 14:51:19,451 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,451 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,451 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,451 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,453 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 07:52:12] 2026-03-12 14:51:19,454 | INFO     | job 7037479537 has completed (purged errors)
[2026-03-12 07:52:12] 2026-03-12 14:51:19,454 | INFO     | overall cleanup function is called
[2026-03-12 07:52:12] 2026-03-12 14:51:20,469 | INFO     | --- collectZombieJob: --- 10, [1320680]
[2026-03-12 07:52:12] 2026-03-12 14:51:20,470 | INFO     | zombie collector waiting for pid 1320680
[2026-03-12 07:52:12] 2026-03-12 14:51:20,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 07:52:12] 2026-03-12 14:51:20,470 | INFO     | collected zombie processes
[2026-03-12 07:52:12] 2026-03-12 14:51:20,470 | INFO     | will attempt to kill all subprocesses of pid=1320680
[2026-03-12 07:52:12] 2026-03-12 14:51:20,588 | INFO     | number of running child processes to parent process 1320680: 1
[2026-03-12 07:52:12] 2026-03-12 14:51:20,588 | INFO     | maximum number of monitored processes: 6
[2026-03-12 07:52:12] 2026-03-12 14:51:20,589 | INFO     | aborting job monitoring since job object (job id=7037479537) has expired
[2026-03-12 07:52:12] 2026-03-12 14:51:20,976 | INFO     | PID=1303121 has CPU usage=23.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 07:52:12] 2026-03-12 14:51:20,976 | INFO     | .. there are 15 such processes running
[2026-03-12 07:52:12] 2026-03-12 14:51:21,294 | INFO     | process IDs to be killed: [1320680] (in reverse order)
[2026-03-12 07:52:12] 2026-03-12 14:51:21,495 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 07:52:12] 2026-03-12 14:51:21,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 07:52:12] 2026-03-12 14:51:21,517 | INFO     | did not find any defunct processes belonging to 1320680
[2026-03-12 07:52:12] 2026-03-12 14:51:21,533 | INFO     | did not find any defunct processes belonging to 1320680
[2026-03-12 07:52:12] 2026-03-12 14:51:21,533 | INFO     | ready for new job
[2026-03-12 07:52:12] 2026-03-12 14:51:21,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 07:52:12] 2026-03-12 14:51:21,535 | INFO     | **************************************
[2026-03-12 07:52:12] 2026-03-12 14:51:21,535 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 07:52:12] 2026-03-12 14:51:21,535 | INFO     | **************************************
[2026-03-12 07:52:12] 2026-03-12 14:51:21,535 | INFO     | 
[2026-03-12 07:52:12] 2026-03-12 14:51:21,544 | INFO     | architecture information:
[2026-03-12 07:52:12] 2026-03-12 14:51:21,545 | INFO     | executing command: cat /etc/os-release
[2026-03-12 07:52:12] 2026-03-12 14:51:21,569 | INFO     | cat /etc/os-release:
[2026-03-12 07:52:12] NAME="CentOS Linux"
[2026-03-12 07:52:12] VERSION="7 (Core)"
[2026-03-12 07:52:12] ID="centos"
[2026-03-12 07:52:12] ID_LIKE="rhel fedora"
[2026-03-12 07:52:12] VERSION_ID="7"
[2026-03-12 07:52:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 07:52:12] ANSI_COLOR="0;31"
[2026-03-12 07:52:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 07:52:12] HOME_URL="https://www.centos.org/"
[2026-03-12 07:52:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 07:52:12] 
[2026-03-12 07:52:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 07:52:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 07:52:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 07:52:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 07:52:12] 
[2026-03-12 07:52:12] 2026-03-12 14:51:21,569 | INFO     | **************************************
[2026-03-12 07:52:12] 2026-03-12 14:51:22,072 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2026-03-12 07:52:12] 2026-03-12 14:51:22,101 | INFO     | sufficient remaining disk space (362657349632 B)
[2026-03-12 07:52:12] 2026-03-12 14:51:22,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 07:52:12] 2026-03-12 14:51:22,102 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 07:52:12] 2026-03-12 14:51:22,102 | INFO     | update_server=False
[2026-03-12 07:52:12] 2026-03-12 14:51:22,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 07:52:12] 2026-03-12 14:51:22,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:52:12] 2026-03-12 14:51:22,103 | INFO     | aborting loop
[2026-03-12 07:52:12] 2026-03-12 14:51:22,218 | INFO     | all data control threads have been joined
[2026-03-12 07:52:12] 2026-03-12 14:51:22,399 | INFO     | all job control threads have been joined
[2026-03-12 07:52:12] 2026-03-12 14:51:22,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 07:52:12] 2026-03-12 14:51:23,033 | INFO     | all payload control threads have been joined
[2026-03-12 07:52:12] 2026-03-12 14:51:23,107 | INFO     | [job] retrieve thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,108 | INFO     | [job] job monitor thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,224 | INFO     | [data] control thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,324 | INFO     | [payload] validate_post thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,373 | INFO     | [job] validate thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,404 | INFO     | [job] control thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 07:52:12] 2026-03-12 14:51:23,557 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:23,666 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:24,038 | INFO     | [payload] control thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:24,167 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:24,170 | INFO     | [data] copytool_in thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:24,309 | INFO     | [payload] failed_post thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:24,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:52:12] 2026-03-12 14:51:24,908 | INFO     | [data] copytool_out thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:25,434 | INFO     | [job] queue monitor thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:27,531 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:32,694 | INFO     | job.realtimelogging is not enabled
[2026-03-12 07:52:12] 2026-03-12 14:51:33,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 07:52:12] 2026-03-12 14:51:53,836 | INFO     | PID=1303121 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 07:52:12] 2026-03-12 14:51:53,836 | INFO     | .. there are 15 such processes running
[2026-03-12 07:52:12] 2026-03-12 14:51:53,837 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 07:52:12] 2026-03-12 14:51:53,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 07:52:12] 2026-03-12 14:51:53,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 07:52:12] 2026-03-12 14:52:05,365 | INFO     | [monitor] cgroup control has ended
[2026-03-12 07:52:12] 2026-03-12 14:52:07,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130680953952064)>', '<ExcThread(monitor, started 130680260380416)>']
[2026-03-12 07:52:12] 2026-03-12 14:52:07,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 07:52:12] 2026-03-12 14:52:07,904 | INFO     | [monitor] control thread has ended
[2026-03-12 07:52:12] 2026-03-12 14:52:12,155 | INFO     | all workflow threads have been joined
[2026-03-12 07:52:12] 2026-03-12 14:52:12,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 07:52:12] 2026-03-12 14:52:12,156 | INFO     | traces error code: 0
[2026-03-12 07:52:12] 2026-03-12 14:52:12,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 07:52:12] 2026-03-12 14:52:12,300 [wrapper] ==== pilot stdout END ====
[2026-03-12 07:52:12] 2026-03-12 14:52:12,303 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 07:52:12] 2026-03-12 14:52:12,307 [wrapper] pilotpid: 1303121
[2026-03-12 07:52:12] 2026-03-12 14:52:12,310 [wrapper] Pilot exit status: 0
[2026-03-12 07:52:12] 2026-03-12 14:52:12,326 [wrapper] pandaids: 7037479537
[2026-03-12 07:52:12] 2026-03-12 14:52:12,462 [wrapper] cleanup supervisor_pilot 1409616 1303122
[2026-03-12 07:52:12] 2026-03-12 14:52:12,466 [wrapper] Test setup, not cleaning
[2026-03-12 07:52:12] 2026-03-12 14:52:12,469 [wrapper] apfmon messages muted
[2026-03-12 07:52:12] 2026-03-12 14:52:12,473 [wrapper] ==== wrapper stdout END ====
[2026-03-12 07:52:12] 2026-03-12 14:52:12,476 [wrapper] ==== wrapper stderr END ====
[2026-03-12 07:52:12]  *** Error codes and diagnostics ***
[2026-03-12 07:52:12]     "exeErrorCode": 0,
[2026-03-12 07:52:12]     "exeErrorDiag": "",
[2026-03-12 07:52:12]     "pilotErrorCode": 0,
[2026-03-12 07:52:12]     "pilotErrorDiag": "",
[2026-03-12 07:52:12]  *** Listing of results directory ***
[2026-03-12 07:52:12] total 335068
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc    584627 Mar  3 23:36 pilot3.tar.gz
[2026-03-12 07:52:12] -rwx------ 1 boinc boinc     36322 Mar  3 23:37 runpilot2-wrapper.sh
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc      5111 Mar  3 23:38 queuedata.json
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc       100 Mar 12 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 07:52:12] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 06:26 run_atlas
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc       105 Mar 12 06:26 job.xml
[2026-03-12 07:52:12] -rw-r--r-- 2 boinc boinc 191284650 Mar 12 06:26 EVNT.48700856._000084.pool.root.1
[2026-03-12 07:52:12] drwxrwx--x 2 boinc boinc      4096 Mar 12 06:26 shared
[2026-03-12 07:52:12] -rw-r--r-- 2 boinc boinc    597944 Mar 12 06:26 input.tar.gz
[2026-03-12 07:52:12] -rw-r--r-- 2 boinc boinc     15845 Mar 12 06:26 start_atlas.sh
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc         0 Mar 12 06:26 boinc_setup_complete
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc      9894 Mar 12 06:26 init_data.xml
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc         0 Mar 12 06:26 boinc_lockfile
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc      2520 Mar 12 06:26 pandaJob.out
[2026-03-12 07:52:12] -rw------- 1 boinc boinc   1006268 Mar 12 06:26 agis_schedconf.cvmfs.json
[2026-03-12 07:52:12] -rw------- 1 boinc boinc   1511578 Mar 12 06:26 agis_ddmendpoints.agis.ALL.json
[2026-03-12 07:52:12] -rw------- 1 boinc boinc       414 Mar 12 06:26 workernode_map.json
[2026-03-12 07:52:12] drwx------ 5 boinc boinc      4096 Mar 12 06:26 pilot3
[2026-03-12 07:52:12] -rw------- 1 boinc boinc 145761435 Mar 12 07:50 HITS.48700858._002811.pool.root.1
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc       529 Mar 12 07:50 boinc_task_state.xml
[2026-03-12 07:52:12] -rw------- 1 boinc boinc        95 Mar 12 07:51 pilot_heartbeat.json
[2026-03-12 07:52:12] -rw------- 1 boinc boinc      1023 Mar 12 07:51 memory_monitor_summary.json
[2026-03-12 07:52:12] -rw------- 1 boinc boinc    325144 Mar 12 07:51 log.48700858._002811.job.log.tgz.1
[2026-03-12 07:52:12] -rw------- 1 boinc boinc      6256 Mar 12 07:51 heartbeat.json
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc        27 Mar 12 07:51 wrapper_checkpoint.txt
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc      8192 Mar 12 07:51 boinc_mmap_file
[2026-03-12 07:52:12] -rw------- 1 boinc boinc      4901 Mar 12 07:52 pilotlog.txt
[2026-03-12 07:52:12] -rw------- 1 boinc boinc    735716 Mar 12 07:52 log.48700858._002811.job.log.1
[2026-03-12 07:52:12] -rw------- 1 boinc boinc       357 Mar 12 07:52 output.list
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc       620 Mar 12 07:52 runtime_log
[2026-03-12 07:52:12] -rw------- 1 boinc boinc   1075200 Mar 12 07:52 result.tar.gz
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc      8913 Mar 12 07:52 runtime_log.err
[2026-03-12 07:52:12] -rw------- 1 boinc boinc       647 Mar 12 07:52 5uuMDmpyvH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDiHLDmekYlWn.diag
[2026-03-12 07:52:12] -rw-r--r-- 1 boinc boinc     22804 Mar 12 07:52 stderr.txt
[2026-03-12 07:52:12] HITS file was successfully produced:
[2026-03-12 07:52:12] -rw------- 1 boinc boinc 145761435 Mar 12 07:50 shared/HITS.pool.root.1
[2026-03-12 07:52:12]  *** Contents of shared directory: ***
[2026-03-12 07:52:12] total 330812
[2026-03-12 07:52:12] -rw-r--r-- 2 boinc boinc 191284650 Mar 12 06:26 ATLAS.root_0
[2026-03-12 07:52:12] -rw-r--r-- 2 boinc boinc    597944 Mar 12 06:26 input.tar.gz
[2026-03-12 07:52:12] -rw-r--r-- 2 boinc boinc     15845 Mar 12 06:26 start_atlas.sh
[2026-03-12 07:52:12] -rw------- 1 boinc boinc 145761435 Mar 12 07:50 HITS.pool.root.1
[2026-03-12 07:52:12] -rw------- 1 boinc boinc   1075200 Mar 12 07:52 result.tar.gz
07:52:14 (1295563): run_atlas exited; CPU time 37326.535905
07:52:14 (1295563): called boinc_finish(0)

</stderr_txt>
]]>

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