Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:58:57 (7792): wrapper (7.7.26015): starting
06:58:57 (7792): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 06:58:57] Arguments: --nthreads 12
[2026-03-12 06:58:57] Threads: 12
[2026-03-12 06:58:57] Checking for CVMFS
[2026-03-12 06:58:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 06:58:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 06:58:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 06:58:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 06:58:58] 2.11.2.0 28623 432856 98308 157197 3 52 13529619 20275200 1 130560 4 189394497 99.952 24181111 16951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 06:58:58] CVMFS is ok
[2026-03-12 06:58:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 06:58:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 06:58:58] Further information can be found at the LHC@home message board.
[2026-03-12 06:58:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:58:58] Checking for apptainer binary...
[2026-03-12 06:58:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 06:58:58] Running /usr/bin/apptainer --version
[2026-03-12 06:58:58] apptainer version 1.3.2-1.el7
[2026-03-12 06:58:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:58:59] c-205-20.aglt2.org
[2026-03-12 06:58:59] apptainer works
[2026-03-12 06:58:59] Set ATHENA_PROC_NUMBER=12
[2026-03-12 06:58:59] Set ATHENA_CORE_NUMBER=12
[2026-03-12 06:58:59] Starting ATLAS job with PandaID=7037261016
[2026-03-12 06:58:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:02:31]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:02:31]  direct_access_wan=False
[2026-03-12 08:02:31]  domain=
[2026-03-12 08:02:31]  filesize=372562
[2026-03-12 08:02:31]  filetype=log
[2026-03-12 08:02:31]  guid=495bfc5e-5112-4af8-9bac-c633bca9de0a
[2026-03-12 08:02:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 08:02:31]  is_altstaged=None
[2026-03-12 08:02:31]  is_tar=False
[2026-03-12 08:02:31]  lfn=log.48937827._000162.job.log.tgz.1
[2026-03-12 08:02:31]  mtime=0
[2026-03-12 08:02:31]  protocol_id=None
[2026-03-12 08:02:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 08:02:31]  replicas=None
[2026-03-12 08:02:31]  scope=mc23_13p6TeV
[2026-03-12 08:02:31]  status=None
[2026-03-12 08:02:31]  status_code=0
[2026-03-12 08:02:31]  storage_token=
[2026-03-12 08:02:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7037261016/log.48937827._000162.job.log.tgz.1
[2026-03-12 08:02:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/4b/log.48937827._000162.job.log.tgz.1
[2026-03-12 08:02:31]  workdir=None
[2026-03-12 08:02:31] ]
[2026-03-12 08:02:31] 2026-03-12 12:01:44,517 | INFO     | transferring file log.48937827._000162.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7037261016/log.48937827._000162.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-12 08:02:31] 2026-03-12 12:01:44,517 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7037261016/log.48937827._000162.job.log.tgz.1 /tmp/boinchome/slots/0/log.48937827._000162.job
[2026-03-12 08:02:31] 2026-03-12 12:01:44,586 | INFO     | adding to output.list: log.48937827._000162.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/4b/log.48937827._000162.job.log.tg
[2026-03-12 08:02:31] 2026-03-12 12:01:44,587 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 08:02:31] 2026-03-12 12:01:44,587 | INFO     | summary of transferred files:
[2026-03-12 08:02:31] 2026-03-12 12:01:44,588 | INFO     |  -- lfn=log.48937827._000162.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 08:02:31] 2026-03-12 12:01:44,588 | INFO     | stage-out finished correctly
[2026-03-12 08:02:31] 2026-03-12 12:01:45,222 | INFO     | time since job start (3745s) is within the limit (349056.0s)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 08:02:31] 2026-03-12 12:01:45,530 | INFO     | job 7037261016 has state=finished
[2026-03-12 08:02:31] 2026-03-12 12:01:45,530 | INFO     | preparing for final server update for job 7037261016 in state='finished'
[2026-03-12 08:02:31] 2026-03-12 12:01:45,530 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037261016/jobReport.json
[2026-03-12 08:02:31] 2026-03-12 12:01:45,533 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 08:02:31] 2026-03-12 12:01:45,534 | INFO     | this job has now completed (state=finished)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,534 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,534 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:02:31] 2026-03-12 12:01:45,534 | INFO     | job 7037261016 has finished - writing final server update
[2026-03-12 08:02:31] 2026-03-12 12:01:45,535 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,537 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037261016/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,538 | INFO     | extracted standard info from prmon json
[2026-03-12 08:02:31] 2026-03-12 12:01:45,538 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:02:31] 2026-03-12 12:01:45,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:02:31] 2026-03-12 12:01:45,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:02:31] 2026-03-12 12:01:45,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:02:31] 2026-03-12 12:01:45,540 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:02:31] 2026-03-12 12:01:45,540 | INFO     | sum of square deviations: 48810217.5
[2026-03-12 08:02:31] 2026-03-12 12:01:45,540 | INFO     | sum of deviations: -1640369910.0
[2026-03-12 08:02:31] 2026-03-12 12:01:45,540 | INFO     | mean x: 1773315104.5
[2026-03-12 08:02:31] 2026-03-12 12:01:45,540 | INFO     | mean y: 2737954.925925926
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | intersect: 59598717800.1357
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | chi2: 0.03555234444716365
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | current memory leak: -33.61 B/s (using 54 data points, chi2=0.04)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | could have reported an average CPU frequency of 1762 MHz (6 samples)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | ..............................
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | . Timing measurements:
[2026-03-12 08:02:31] 2026-03-12 12:01:45,541 | INFO     | . get job = 0 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | . initial setup = 7 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | . payload setup = 7 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | . stage-in = 0 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | . payload execution = 3720 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | . stage-out = 0 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | . log creation = 0 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,542 | INFO     | ..............................
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | 
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | job summary report
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | --------------------------------------------------
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | PanDA job id: 7037261016
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | task id: 48937827
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | errors: (none)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:02:31] 2026-03-12 12:01:45,619 | INFO     | pilot state: finished 
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | transexitcode: 0
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | exeerrorcode: 0
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | exeerrordiag: 
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | exitcode: 0
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | exitmsg: OK
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | cpuconsumptiontime: 40816 s
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | nevents: 400
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | neventsw: 0
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | pid: 16182
[2026-03-12 08:02:31] 2026-03-12 12:01:45,620 | INFO     | pgrp: 16182
[2026-03-12 08:02:31] 2026-03-12 12:01:45,621 | INFO     | corecount: 12
[2026-03-12 08:02:31] 2026-03-12 12:01:45,621 | INFO     | event service: False
[2026-03-12 08:02:31] 2026-03-12 12:01:45,621 | INFO     | sizes: {0: 2279769, 1: 2280230, 11: 2280230, 3731: 2305981, 3732: 2305980, 3734: 2315034, 3735: 2315412}
[2026-03-12 08:02:31] 2026-03-12 12:01:45,621 | INFO     | --------------------------------------------------
[2026-03-12 08:02:31] 2026-03-12 12:01:45,621 | INFO     | 
[2026-03-12 08:02:31] 2026-03-12 12:01:45,621 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 08:02:31] 2026-03-12 12:01:45,644 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,645 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,645 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,645 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,646 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,647 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,648 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:02:31] 2026-03-12 12:01:45,648 | INFO     | job 7037261016 has completed (purged errors)
[2026-03-12 08:02:31] 2026-03-12 12:01:45,648 | INFO     | overall cleanup function is called
[2026-03-12 08:02:31] 2026-03-12 12:01:46,342 | INFO     | PID=11806 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 08:02:31] 2026-03-12 12:01:46,656 | INFO     | --- collectZombieJob: --- 10, [16182]
[2026-03-12 08:02:31] 2026-03-12 12:01:46,656 | INFO     | zombie collector waiting for pid 16182
[2026-03-12 08:02:31] 2026-03-12 12:01:46,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:02:31] 2026-03-12 12:01:46,657 | INFO     | collected zombie processes
[2026-03-12 08:02:31] 2026-03-12 12:01:46,657 | INFO     | will attempt to kill all subprocesses of pid=16182
[2026-03-12 08:02:31] 2026-03-12 12:01:46,745 | INFO     | process IDs to be killed: [16182] (in reverse order)
[2026-03-12 08:02:31] 2026-03-12 12:01:46,797 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:02:31] 2026-03-12 12:01:46,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:02:31] 2026-03-12 12:01:46,801 | INFO     | did not find any defunct processes belonging to 16182
[2026-03-12 08:02:31] 2026-03-12 12:01:46,803 | INFO     | did not find any defunct processes belonging to 16182
[2026-03-12 08:02:31] 2026-03-12 12:01:46,803 | INFO     | ready for new job
[2026-03-12 08:02:31] 2026-03-12 12:01:46,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:02:31] 2026-03-12 12:01:46,804 | INFO     | **************************************
[2026-03-12 08:02:31] 2026-03-12 12:01:46,804 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 08:02:31] 2026-03-12 12:01:46,805 | INFO     | **************************************
[2026-03-12 08:02:31] 2026-03-12 12:01:46,805 | INFO     | 
[2026-03-12 08:02:31] 2026-03-12 12:01:46,805 | INFO     | architecture information:
[2026-03-12 08:02:31] 2026-03-12 12:01:46,806 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:02:31] 2026-03-12 12:01:46,821 | INFO     | cat /etc/os-release:
[2026-03-12 08:02:31] NAME="CentOS Linux"
[2026-03-12 08:02:31] VERSION="7 (Core)"
[2026-03-12 08:02:31] ID="centos"
[2026-03-12 08:02:31] ID_LIKE="rhel fedora"
[2026-03-12 08:02:31] VERSION_ID="7"
[2026-03-12 08:02:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:02:31] ANSI_COLOR="0;31"
[2026-03-12 08:02:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:02:31] HOME_URL="https://www.centos.org/"
[2026-03-12 08:02:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:02:31] 
[2026-03-12 08:02:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:02:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:02:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:02:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:02:31] 
[2026-03-12 08:02:31] 2026-03-12 12:01:46,821 | INFO     | **************************************
[2026-03-12 08:02:31] 2026-03-12 12:01:47,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 08:02:31] 2026-03-12 12:01:47,361 | INFO     | sufficient remaining disk space (29256318976 B)
[2026-03-12 08:02:31] 2026-03-12 12:01:47,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:02:31] 2026-03-12 12:01:47,362 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:02:31] 2026-03-12 12:01:47,362 | INFO     | update_server=False
[2026-03-12 08:02:31] 2026-03-12 12:01:47,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:02:31] 2026-03-12 12:01:47,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:02:31] 2026-03-12 12:01:47,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:02:31] 2026-03-12 12:01:47,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:02:31] 2026-03-12 12:01:47,364 | INFO     | aborting loop
[2026-03-12 08:02:31] 2026-03-12 12:01:47,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:02:31] 2026-03-12 12:01:47,732 | INFO     | all data control threads have been joined
[2026-03-12 08:02:31] 2026-03-12 12:01:48,092 | INFO     | all job control threads have been joined
[2026-03-12 08:02:31] 2026-03-12 12:01:48,367 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:48,368 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:48,369 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:48,381 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:48,517 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:48,723 | INFO     | all payload control threads have been joined
[2026-03-12 08:02:31] 2026-03-12 12:01:48,737 | INFO     | [data] control thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,097 | INFO     | [job] control thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,187 | INFO     | [job] validate thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,288 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,291 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,470 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,472 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,679 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:49,728 | INFO     | [payload] control thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:51,369 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:01:57,757 | INFO     | job.realtimelogging is not enabled
[2026-03-12 08:02:31] 2026-03-12 12:01:58,760 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:02:31] 2026-03-12 12:02:18,539 | INFO     | PID=11806 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 08:02:31] 2026-03-12 12:02:18,540 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:02:31] 2026-03-12 12:02:18,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:02:31] 2026-03-12 12:02:18,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:02:31] 2026-03-12 12:02:25,552 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:02:31] 2026-03-12 12:02:26,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128962033472)>', '<ExcThread(monitor, started 140127938541312)>']
[2026-03-12 08:02:31] 2026-03-12 12:02:26,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:02:31] 2026-03-12 12:02:26,581 | INFO     | [monitor] control thread has ended
[2026-03-12 08:02:31] 2026-03-12 12:02:31,110 | INFO     | all workflow threads have been joined
[2026-03-12 08:02:31] 2026-03-12 12:02:31,110 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:02:31] 2026-03-12 12:02:31,111 | INFO     | traces error code: 0
[2026-03-12 08:02:31] 2026-03-12 12:02:31,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:02:31] 2026-03-12 12:02:31,194 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:02:31] 2026-03-12 12:02:31,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:02:31] 2026-03-12 12:02:31,201 [wrapper] pilotpid: 11806
[2026-03-12 08:02:31] 2026-03-12 12:02:31,204 [wrapper] Pilot exit status: 0
[2026-03-12 08:02:31] 2026-03-12 12:02:31,220 [wrapper] pandaids: 7037261016
[2026-03-12 08:02:31] 2026-03-12 12:02:31,258 [wrapper] cleanup supervisor_pilot  3981 11807
[2026-03-12 08:02:31] 2026-03-12 12:02:31,262 [wrapper] Test setup, not cleaning
[2026-03-12 08:02:31] 2026-03-12 12:02:31,266 [wrapper] apfmon messages muted
[2026-03-12 08:02:31] 2026-03-12 12:02:31,270 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:02:31] 2026-03-12 12:02:31,274 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:02:31]  *** Error codes and diagnostics ***
[2026-03-12 08:02:31]     "exeErrorCode": 0,
[2026-03-12 08:02:31]     "exeErrorDiag": "",
[2026-03-12 08:02:31]     "pilotErrorCode": 0,
[2026-03-12 08:02:31]     "pilotErrorDiag": "",
[2026-03-12 08:02:31]  *** Listing of results directory ***
[2026-03-12 08:02:31] total 444228
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 01:10 pilot3.tar.gz
[2026-03-12 08:02:31] -rwx------ 1 boincer umatlas     36322 Mar  4 01:13 runpilot2-wrapper.sh
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 01:14 queuedata.json
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas       100 Mar 12 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:02:31] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 06:58 run_atlas
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas       105 Mar 12 06:58 job.xml
[2026-03-12 08:02:31] -rw-r--r-- 2 boincer umatlas 264133612 Mar 12 06:58 EVNT.48564783._000007.pool.root.1
[2026-03-12 08:02:31] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 06:58 start_atlas.sh
[2026-03-12 08:02:31] drwxrwx--x 2 boincer umatlas      4096 Mar 12 06:58 shared
[2026-03-12 08:02:31] -rw-r--r-- 2 boincer umatlas    597942 Mar 12 06:58 input.tar.gz
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas         0 Mar 12 06:58 boinc_lockfile
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas      2541 Mar 12 06:58 pandaJob.out
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas        57 Mar 12 06:59 setup.sh.local
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas   1006241 Mar 12 06:59 agis_schedconf.cvmfs.json
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas   1511578 Mar 12 06:59 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas       434 Mar 12 06:59 workernode_map.json
[2026-03-12 08:02:31] drwx------ 5 boincer umatlas      4096 Mar 12 06:59 pilot3
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas 184971712 Mar 12 08:01 HITS.48937827._000162.pool.root.1
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas       529 Mar 12 08:01 boinc_task_state.xml
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas      1044 Mar 12 08:01 memory_monitor_summary.json
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas    372562 Mar 12 08:01 log.48937827._000162.job.log.tgz.1
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas      6394 Mar 12 08:01 heartbeat.json
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas      5953 Mar 12 08:01 init_data.xml
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas        95 Mar 12 08:02 pilot_heartbeat.json
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 08:02 boinc_mmap_file
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas        27 Mar 12 08:02 wrapper_checkpoint.txt
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas      4814 Mar 12 08:02 pilotlog.txt
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas    555209 Mar 12 08:02 log.48937827._000162.job.log.1
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas       357 Mar 12 08:02 output.list
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas       620 Mar 12 08:02 runtime_log
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas    942080 Mar 12 08:02 result.tar.gz
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas      9343 Mar 12 08:02 runtime_log.err
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas       659 Mar 12 08:02 GMOLDmdfuH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWdHLDmpPW2lm.diag
[2026-03-12 08:02:31] -rw-r--r-- 1 boincer umatlas     21114 Mar 12 08:02 stderr.txt
[2026-03-12 08:02:31] HITS file was successfully produced:
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas 184971712 Mar 12 08:01 shared/HITS.pool.root.1
[2026-03-12 08:02:31]  *** Contents of shared directory: ***
[2026-03-12 08:02:31] total 440104
[2026-03-12 08:02:31] -rw-r--r-- 2 boincer umatlas 264133612 Mar 12 06:58 ATLAS.root_0
[2026-03-12 08:02:31] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 06:58 start_atlas.sh
[2026-03-12 08:02:31] -rw-r--r-- 2 boincer umatlas    597942 Mar 12 06:58 input.tar.gz
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas 184971712 Mar 12 08:01 HITS.pool.root.1
[2026-03-12 08:02:31] -rw------- 1 boincer umatlas    942080 Mar 12 08:02 result.tar.gz
08:02:32 (7792): run_atlas exited; CPU time 40780.043527
08:02:32 (7792): called boinc_finish(0)

</stderr_txt>
]]>

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