Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:52:03 (29406): wrapper (7.7.26015): starting
06:52:03 (29406): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 06:52:04] Arguments: --nthreads 8
[2026-03-12 06:52:04] Threads: 8
[2026-03-12 06:52:04] Checking for CVMFS
[2026-03-12 06:52:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 06:52:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 06:52:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 06:52:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 06:52:04] 2.11.2.0 2701 212943 88056 157197 3 51 10816828 20275201 1 130560 0 54817598 99.907 9997815 25444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 06:52:04] CVMFS is ok
[2026-03-12 06:52:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 06:52:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 06:52:04] Further information can be found at the LHC@home message board.
[2026-03-12 06:52:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:52:04] Checking for apptainer binary...
[2026-03-12 06:52:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 06:52:04] Running /usr/bin/apptainer --version
[2026-03-12 06:52:04] apptainer version 1.3.2-1.el7
[2026-03-12 06:52:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:52:06] c-204-1.aglt2.org
[2026-03-12 06:52:06] apptainer works
[2026-03-12 06:52:06] Set ATHENA_PROC_NUMBER=8
[2026-03-12 06:52:06] Set ATHENA_CORE_NUMBER=8
[2026-03-12 06:52:06] Starting ATLAS job with PandaID=7037167561
[2026-03-12 06:52:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:44:45]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:44:45] 2026-03-12 12:43:47,254 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 08:44:45] 2026-03-12 12:43:47,348 | INFO     | job 7037167561 has state=finished
[2026-03-12 08:44:45] 2026-03-12 12:43:47,348 | INFO     | preparing for final server update for job 7037167561 in state='finished'
[2026-03-12 08:44:45] 2026-03-12 12:43:47,349 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037167561/jobReport.json
[2026-03-12 08:44:45] 2026-03-12 12:43:47,354 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 08:44:45] 2026-03-12 12:43:47,354 | INFO     | this job has now completed (state=finished)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,354 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,355 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:44:45] 2026-03-12 12:43:47,355 | INFO     | job 7037167561 has finished - writing final server update
[2026-03-12 08:44:45] 2026-03-12 12:43:47,355 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037167561/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,358 | INFO     | extracted standard info from prmon json
[2026-03-12 08:44:45] 2026-03-12 12:43:47,358 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:44:45] 2026-03-12 12:43:47,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:44:45] 2026-03-12 12:43:47,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:44:45] 2026-03-12 12:43:47,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:44:45] 2026-03-12 12:43:47,361 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:44:45] 2026-03-12 12:43:47,362 | INFO     | sum of square deviations: 401533110.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,362 | INFO     | sum of deviations: 10900625702.000008
[2026-03-12 08:44:45] 2026-03-12 12:43:47,362 | INFO     | mean x: 1773316069.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,362 | INFO     | mean y: 2517279.0642201835
[2026-03-12 08:44:45] 2026-03-12 12:43:47,362 | INFO     | intersect: -48138605428.129265
[2026-03-12 08:44:45] 2026-03-12 12:43:47,363 | INFO     | chi2: 1.6078842463712648
[2026-03-12 08:44:45] 2026-03-12 12:43:47,363 | INFO     | sum of square deviations: 348769330.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | sum of deviations: 10418791307.5
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | mean x: 1773315916.5
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | mean y: 2515886.2596153845
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | intersect: -52971776481.368
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | chi2: 1.6115563867979208
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | current chi2=1.6115563867979208 (change=-0.22838338238237033 %)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,364 | INFO     | right removable region: 103
[2026-03-12 08:44:45] 2026-03-12 12:43:47,365 | INFO     | sum of square deviations: 348769330.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,365 | INFO     | sum of deviations: -6161438224.000001
[2026-03-12 08:44:45] 2026-03-12 12:43:47,365 | INFO     | mean x: 1773316221.5
[2026-03-12 08:44:45] 2026-03-12 12:43:47,365 | INFO     | mean y: 2565610.480769231
[2026-03-12 08:44:45] 2026-03-12 12:43:47,366 | INFO     | intersect: 31330372876.071903
[2026-03-12 08:44:45] 2026-03-12 12:43:47,366 | INFO     | chi2: 0.08852186158561594
[2026-03-12 08:44:45] 2026-03-12 12:43:47,366 | INFO     | current chi2=0.08852186158561594 (change=94.49451278688777 %)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,366 | INFO     | sum of square deviations: 300842850.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,367 | INFO     | sum of deviations: -5317507432.999998
[2026-03-12 08:44:45] 2026-03-12 12:43:47,367 | INFO     | mean x: 1773316374.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,367 | INFO     | mean y: 2562732.767676768
[2026-03-12 08:44:45] 2026-03-12 12:43:47,367 | INFO     | intersect: 31346578386.806335
[2026-03-12 08:44:45] 2026-03-12 12:43:47,367 | INFO     | chi2: 0.0710077715260534
[2026-03-12 08:44:45] 2026-03-12 12:43:47,367 | INFO     | current chi2=0.0710077715260534 (change=19.785044898342292 %)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,368 | INFO     | left removable region: 20
[2026-03-12 08:44:45] 2026-03-12 12:43:47,368 | INFO     | sum of square deviations: 177275882.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,368 | INFO     | sum of deviations: 973943812.0000004
[2026-03-12 08:44:45] 2026-03-12 12:43:47,368 | INFO     | mean x: 1773316496.0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,368 | INFO     | mean y: 2538610.8192771086
[2026-03-12 08:44:45] 2026-03-12 12:43:47,369 | INFO     | intersect: -9739963350.032473
[2026-03-12 08:44:45] 2026-03-12 12:43:47,369 | INFO     | chi2: 0.000293365016766589
[2026-03-12 08:44:45] 2026-03-12 12:43:47,369 | INFO     | current memory leak: 5.49 B/s (using 83 data points, chi2=0.00)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,369 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | ..............................
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . Timing measurements:
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . get job = 0 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . initial setup = 8 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . payload setup = 8 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . stage-in = 0 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . payload execution = 6651 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . stage-out = 0 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,370 | INFO     | . log creation = 0 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,371 | INFO     | ..............................
[2026-03-12 08:44:45] 2026-03-12 12:43:47,455 | INFO     | 
[2026-03-12 08:44:45] 2026-03-12 12:43:47,455 | INFO     | job summary report
[2026-03-12 08:44:45] 2026-03-12 12:43:47,455 | INFO     | --------------------------------------------------
[2026-03-12 08:44:45] 2026-03-12 12:43:47,456 | INFO     | PanDA job id: 7037167561
[2026-03-12 08:44:45] 2026-03-12 12:43:47,456 | INFO     | task id: 48936143
[2026-03-12 08:44:45] 2026-03-12 12:43:47,456 | INFO     | errors: (none)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,456 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:44:45] 2026-03-12 12:43:47,456 | INFO     | pilot state: finished 
[2026-03-12 08:44:45] 2026-03-12 12:43:47,457 | INFO     | transexitcode: 0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,457 | INFO     | exeerrorcode: 0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,457 | INFO     | exeerrordiag: 
[2026-03-12 08:44:45] 2026-03-12 12:43:47,457 | INFO     | exitcode: 0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,457 | INFO     | exitmsg: OK
[2026-03-12 08:44:45] 2026-03-12 12:43:47,457 | INFO     | cpuconsumptiontime: 48940 s
[2026-03-12 08:44:45] 2026-03-12 12:43:47,458 | INFO     | nevents: 400
[2026-03-12 08:44:45] 2026-03-12 12:43:47,458 | INFO     | neventsw: 0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,458 | INFO     | pid: 5187
[2026-03-12 08:44:45] 2026-03-12 12:43:47,458 | INFO     | pgrp: 5187
[2026-03-12 08:44:45] 2026-03-12 12:43:47,458 | INFO     | corecount: 8
[2026-03-12 08:44:45] 2026-03-12 12:43:47,459 | INFO     | event service: False
[2026-03-12 08:44:45] 2026-03-12 12:43:47,459 | INFO     | sizes: {0: 2279780, 1: 2280241, 12: 2280241, 6663: 2307347, 6664: 2316345, 6665: 2316401, 6666: 2316723}
[2026-03-12 08:44:45] 2026-03-12 12:43:47,459 | INFO     | --------------------------------------------------
[2026-03-12 08:44:45] 2026-03-12 12:43:47,459 | INFO     | 
[2026-03-12 08:44:45] 2026-03-12 12:43:47,459 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 08:44:45] 2026-03-12 12:43:47,492 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,492 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,492 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,492 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,495 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,495 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:44:45] 2026-03-12 12:43:47,495 | INFO     | job 7037167561 has completed (purged errors)
[2026-03-12 08:44:45] 2026-03-12 12:43:47,496 | INFO     | overall cleanup function is called
[2026-03-12 08:44:45] 2026-03-12 12:43:48,503 | INFO     | --- collectZombieJob: --- 10, [5187]
[2026-03-12 08:44:45] 2026-03-12 12:43:48,503 | INFO     | zombie collector waiting for pid 5187
[2026-03-12 08:44:45] 2026-03-12 12:43:48,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:44:45] 2026-03-12 12:43:48,504 | INFO     | collected zombie processes
[2026-03-12 08:44:45] 2026-03-12 12:43:48,504 | INFO     | will attempt to kill all subprocesses of pid=5187
[2026-03-12 08:44:45] 2026-03-12 12:43:48,571 | INFO     | process IDs to be killed: [5187] (in reverse order)
[2026-03-12 08:44:45] 2026-03-12 12:43:48,624 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:44:45] 2026-03-12 12:43:48,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:44:45] 2026-03-12 12:43:48,627 | INFO     | did not find any defunct processes belonging to 5187
[2026-03-12 08:44:45] 2026-03-12 12:43:48,630 | INFO     | did not find any defunct processes belonging to 5187
[2026-03-12 08:44:45] 2026-03-12 12:43:48,631 | INFO     | ready for new job
[2026-03-12 08:44:45] 2026-03-12 12:43:48,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:44:45] 2026-03-12 12:43:48,634 | INFO     | **************************************
[2026-03-12 08:44:45] 2026-03-12 12:43:48,634 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 08:44:45] 2026-03-12 12:43:48,634 | INFO     | **************************************
[2026-03-12 08:44:45] 2026-03-12 12:43:48,634 | INFO     | 
[2026-03-12 08:44:45] 2026-03-12 12:43:48,635 | INFO     | architecture information:
[2026-03-12 08:44:45] 2026-03-12 12:43:48,635 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:44:45] 2026-03-12 12:43:48,654 | INFO     | cat /etc/os-release:
[2026-03-12 08:44:45] NAME="CentOS Linux"
[2026-03-12 08:44:45] VERSION="7 (Core)"
[2026-03-12 08:44:45] ID="centos"
[2026-03-12 08:44:45] ID_LIKE="rhel fedora"
[2026-03-12 08:44:45] VERSION_ID="7"
[2026-03-12 08:44:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:44:45] ANSI_COLOR="0;31"
[2026-03-12 08:44:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:44:45] HOME_URL="https://www.centos.org/"
[2026-03-12 08:44:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:44:45] 
[2026-03-12 08:44:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:44:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:44:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:44:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:44:45] 
[2026-03-12 08:44:45] 2026-03-12 12:43:48,654 | INFO     | **************************************
[2026-03-12 08:44:45] 2026-03-12 12:43:49,156 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 08:44:45] 2026-03-12 12:43:49,176 | INFO     | sufficient remaining disk space (18471714816 B)
[2026-03-12 08:44:45] 2026-03-12 12:43:49,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:44:45] 2026-03-12 12:43:49,177 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:44:45] 2026-03-12 12:43:49,177 | INFO     | update_server=False
[2026-03-12 08:44:45] 2026-03-12 12:43:49,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:44:45] 2026-03-12 12:43:49,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:44:45] 2026-03-12 12:43:49,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:44:45] 2026-03-12 12:43:49,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:44:45] 2026-03-12 12:43:49,622 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 08:44:45] 2026-03-12 12:43:49,623 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 08:44:45] 2026-03-12 12:43:49,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:44:45] 2026-03-12 12:43:49,624 | INFO     | will abort loop
[2026-03-12 08:44:45] 2026-03-12 12:43:49,847 | INFO     | all payload control threads have been joined
[2026-03-12 08:44:45] 2026-03-12 12:43:50,005 | INFO     | all data control threads have been joined
[2026-03-12 08:44:45] 2026-03-12 12:43:50,183 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,184 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,223 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,237 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,401 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,555 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,571 | INFO     | all job control threads have been joined
[2026-03-12 08:44:45] 2026-03-12 12:43:50,625 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:50,853 | INFO     | [payload] control thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,011 | INFO     | [data] control thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,147 | INFO     | [job] validate thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,180 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,452 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,462 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,467 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:51,574 | INFO     | [job] control thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:43:53,184 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:44:45] 2026-03-12 12:44:18,892 | INFO     | PID=641 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-12 08:44:45] 2026-03-12 12:44:18,892 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:44:45] 2026-03-12 12:44:18,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:44:45] 2026-03-12 12:44:18,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:44:45] 2026-03-12 12:44:40,222 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:44:45] 2026-03-12 12:44:40,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298057668416)>', '<ExcThread(monitor, started 140297304528640)>']
[2026-03-12 08:44:45] 2026-03-12 12:44:41,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:44:45] 2026-03-12 12:44:41,004 | INFO     | [monitor] control thread has ended
[2026-03-12 08:44:45] 2026-03-12 12:44:45,294 | INFO     | all workflow threads have been joined
[2026-03-12 08:44:45] 2026-03-12 12:44:45,294 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:44:45] 2026-03-12 12:44:45,307 | INFO     | traces error code: 0
[2026-03-12 08:44:45] 2026-03-12 12:44:45,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:44:45] 2026-03-12 12:44:45,431 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:44:45] 2026-03-12 12:44:45,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:44:45] 2026-03-12 12:44:45,441 [wrapper] pilotpid: 641
[2026-03-12 08:44:45] 2026-03-12 12:44:45,446 [wrapper] Pilot exit status: 0
[2026-03-12 08:44:45] 2026-03-12 12:44:45,463 [wrapper] pandaids: 7037167561
[2026-03-12 08:44:45] 2026-03-12 12:44:45,504 [wrapper] cleanup supervisor_pilot 11995 642
[2026-03-12 08:44:45] 2026-03-12 12:44:45,508 [wrapper] Test setup, not cleaning
[2026-03-12 08:44:45] 2026-03-12 12:44:45,512 [wrapper] apfmon messages muted
[2026-03-12 08:44:45] 2026-03-12 12:44:45,517 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:44:45] 2026-03-12 12:44:45,521 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:44:45]  *** Error codes and diagnostics ***
[2026-03-12 08:44:45]     "exeErrorCode": 0,
[2026-03-12 08:44:45]     "exeErrorDiag": "",
[2026-03-12 08:44:45]     "pilotErrorCode": 0,
[2026-03-12 08:44:45]     "pilotErrorDiag": "",
[2026-03-12 08:44:45]  *** Listing of results directory ***
[2026-03-12 08:44:45] total 449444
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer    584627 Mar  3 23:50 pilot3.tar.gz
[2026-03-12 08:44:45] -rwx------ 1 boincer boincer     36322 Mar  3 23:53 runpilot2-wrapper.sh
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer      5111 Mar  3 23:53 queuedata.json
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer       100 Mar 12 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:44:45] -rwxr-xr-x 1 boincer boincer      7986 Mar 12 06:52 run_atlas
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer       105 Mar 12 06:52 job.xml
[2026-03-12 08:44:45] -rw-r--r-- 2 boincer boincer 266664435 Mar 12 06:52 EVNT.48564694._000014.pool.root.1
[2026-03-12 08:44:45] -rw-r--r-- 2 boincer boincer     15845 Mar 12 06:52 start_atlas.sh
[2026-03-12 08:44:45] drwxrwx--x 2 boincer boincer      4096 Mar 12 06:52 shared
[2026-03-12 08:44:45] -rw-r--r-- 2 boincer boincer    597940 Mar 12 06:52 input.tar.gz
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer         0 Mar 12 06:52 boinc_lockfile
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer      2550 Mar 12 06:52 pandaJob.out
[2026-03-12 08:44:45] -rw------- 1 boincer boincer        57 Mar 12 06:52 setup.sh.local
[2026-03-12 08:44:45] -rw------- 1 boincer boincer   1006241 Mar 12 06:52 agis_schedconf.cvmfs.json
[2026-03-12 08:44:45] -rw------- 1 boincer boincer   1511578 Mar 12 06:52 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:44:45] -rw------- 1 boincer boincer       432 Mar 12 06:52 workernode_map.json
[2026-03-12 08:44:45] drwx------ 5 boincer boincer      4096 Mar 12 06:52 pilot3
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer      5907 Mar 12 08:37 init_data.xml
[2026-03-12 08:44:45] -rw------- 1 boincer boincer 186979681 Mar 12 08:43 HITS.48936143._000124.pool.root.1
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer       529 Mar 12 08:43 boinc_task_state.xml
[2026-03-12 08:44:45] -rw------- 1 boincer boincer      1052 Mar 12 08:43 memory_monitor_summary.json
[2026-03-12 08:44:45] -rw------- 1 boincer boincer        95 Mar 12 08:43 pilot_heartbeat.json
[2026-03-12 08:44:45] -rw------- 1 boincer boincer    372283 Mar 12 08:43 log.48936143._000124.job.log.tgz.1
[2026-03-12 08:44:45] -rw------- 1 boincer boincer      6394 Mar 12 08:43 heartbeat.json
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer      8192 Mar 12 08:44 boinc_mmap_file
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer        27 Mar 12 08:44 wrapper_checkpoint.txt
[2026-03-12 08:44:45] -rw------- 1 boincer boincer      4926 Mar 12 08:44 pilotlog.txt
[2026-03-12 08:44:45] -rw------- 1 boincer boincer    950849 Mar 12 08:44 log.48936143._000124.job.log.1
[2026-03-12 08:44:45] -rw------- 1 boincer boincer       357 Mar 12 08:44 output.list
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer       620 Mar 12 08:44 runtime_log
[2026-03-12 08:44:45] -rw------- 1 boincer boincer   1341440 Mar 12 08:44 result.tar.gz
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer      9336 Mar 12 08:44 runtime_log.err
[2026-03-12 08:44:45] -rw------- 1 boincer boincer       657 Mar 12 08:44 BG9LDmbPtH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXUHLDmXMBF2m.diag
[2026-03-12 08:44:45] -rw-r--r-- 1 boincer boincer     21242 Mar 12 08:44 stderr.txt
[2026-03-12 08:44:45] HITS file was successfully produced:
[2026-03-12 08:44:45] -rw------- 1 boincer boincer 186979681 Mar 12 08:43 shared/HITS.pool.root.1
[2026-03-12 08:44:45]  *** Contents of shared directory: ***
[2026-03-12 08:44:45] total 444932
[2026-03-12 08:44:45] -rw-r--r-- 2 boincer boincer 266664435 Mar 12 06:52 ATLAS.root_0
[2026-03-12 08:44:45] -rw-r--r-- 2 boincer boincer     15845 Mar 12 06:52 start_atlas.sh
[2026-03-12 08:44:45] -rw-r--r-- 2 boincer boincer    597940 Mar 12 06:52 input.tar.gz
[2026-03-12 08:44:45] -rw------- 1 boincer boincer 186979681 Mar 12 08:43 HITS.pool.root.1
[2026-03-12 08:44:45] -rw------- 1 boincer boincer   1341440 Mar 12 08:44 result.tar.gz
08:44:47 (29406): run_atlas exited; CPU time 48874.655054
08:44:47 (29406): called boinc_finish(0)

</stderr_txt>
]]>

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