Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:21:01 (551292): wrapper (7.7.26015): starting
22:21:01 (551292): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 22:21:01] Arguments: --nthreads 12
[2026-03-12 22:21:01] Threads: 12
[2026-03-12 22:21:01] Checking for CVMFS
[2026-03-12 22:21:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 22:21:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 22:21:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 22:21:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 22:21:02] 2.12.7.0 4877 565 61976 157223 3 50 2137407 4194305 2751 130560 0 1248596 99.997 18005 2217 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-12 22:21:02] CVMFS is ok
[2026-03-12 22:21:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 22:21:02] Checking for apptainer binary...
[2026-03-12 22:21:02] apptainer is not installed, using version from CVMFS
[2026-03-12 22:21:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 22:21:02] Trebeth
[2026-03-12 22:21:02] apptainer works
[2026-03-12 22:21:02] Set ATHENA_PROC_NUMBER=12
[2026-03-12 22:21:02] Set ATHENA_CORE_NUMBER=12
[2026-03-12 22:21:02] Starting ATLAS job with PandaID=7051653228
[2026-03-12 22:21:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 00:20:33]  *** The last 200 lines of the pilot log: ***
[2026-03-13 00:20:33] 2026-03-13 04:19:32,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,246 | INFO     | log transfer has been attempted: DONE
[2026-03-13 00:20:33] 2026-03-13 04:19:32,247 | INFO     | job 7051653228 has finished - writing final server update
[2026-03-13 00:20:33] 2026-03-13 04:19:32,247 | INFO     | total number of processed events: 400 (read)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,275 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7051653228/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,276 | INFO     | extracted standard info from prmon json
[2026-03-13 00:20:33] 2026-03-13 04:19:32,276 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 00:20:33] 2026-03-13 04:19:32,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 00:20:33] 2026-03-13 04:19:32,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 00:20:33] 2026-03-13 04:19:32,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 00:20:33] 2026-03-13 04:19:32,279 | INFO     | fitting pss+swap vs Time
[2026-03-13 00:20:33] 2026-03-13 04:19:32,279 | INFO     | sum of square deviations: 483971865.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,280 | INFO     | sum of deviations: 23350747143.499996
[2026-03-13 00:20:33] 2026-03-13 04:19:32,280 | INFO     | mean x: 1773372004.5
[2026-03-13 00:20:33] 2026-03-13 04:19:32,280 | INFO     | mean y: 2685359.9051724137
[2026-03-13 00:20:33] 2026-03-13 04:19:32,280 | INFO     | intersect: -85559233138.06628
[2026-03-13 00:20:33] 2026-03-13 04:19:32,281 | INFO     | chi2: 2.453205549728802
[2026-03-13 00:20:33] 2026-03-13 04:19:32,281 | INFO     | sum of square deviations: 424045160.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,281 | INFO     | sum of deviations: 22527385400.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,281 | INFO     | mean x: 1773371852.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,282 | INFO     | mean y: 2683263.036036036
[2026-03-13 00:20:33] 2026-03-13 04:19:32,282 | INFO     | intersect: -94207638976.02869
[2026-03-13 00:20:33] 2026-03-13 04:19:32,282 | INFO     | chi2: 2.4571762681995315
[2026-03-13 00:20:33] 2026-03-13 04:19:32,282 | INFO     | current chi2=2.4571762681995315 (change=-0.1618583681733616 %)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,282 | INFO     | right removable region: 110
[2026-03-13 00:20:33] 2026-03-13 04:19:32,282 | INFO     | sum of square deviations: 424045160.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,283 | INFO     | sum of deviations: -5863167683.000004
[2026-03-13 00:20:33] 2026-03-13 04:19:32,283 | INFO     | mean x: 1773372157.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,283 | INFO     | mean y: 2759278.2162162163
[2026-03-13 00:20:33] 2026-03-13 04:19:32,283 | INFO     | intersect: 24522738048.53023
[2026-03-13 00:20:33] 2026-03-13 04:19:32,283 | INFO     | chi2: 0.17431212925156297
[2026-03-13 00:20:33] 2026-03-13 04:19:32,284 | INFO     | current chi2=0.17431212925156297 (change=92.89451594177126 %)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,284 | INFO     | sum of square deviations: 369281342.5
[2026-03-13 00:20:33] 2026-03-13 04:19:32,284 | INFO     | sum of deviations: -11093451307.500002
[2026-03-13 00:20:33] 2026-03-13 04:19:32,284 | INFO     | mean x: 1773372309.5
[2026-03-13 00:20:33] 2026-03-13 04:19:32,284 | INFO     | mean y: 2773513.2735849055
[2026-03-13 00:20:33] 2026-03-13 04:19:32,285 | INFO     | intersect: 53276029162.5407
[2026-03-13 00:20:33] 2026-03-13 04:19:32,285 | INFO     | chi2: 0.025830896507493876
[2026-03-13 00:20:33] 2026-03-13 04:19:32,285 | INFO     | current chi2=0.025830896507493876 (change=85.18123975743802 %)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,285 | INFO     | sum of square deviations: 319447850.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | sum of deviations: -9834930204.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | mean x: 1773372462.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | mean y: 2769644.5346534653
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | intersect: 54600083069.76398
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | chi2: 0.02558053849864033
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | current chi2=0.02558053849864033 (change=0.9692192014354337 %)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | left removable region: 30
[2026-03-13 00:20:33] 2026-03-13 04:19:32,286 | INFO     | sum of square deviations: 158737860.0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,287 | INFO     | sum of deviations: -4825136417.000001
[2026-03-13 00:20:33] 2026-03-13 04:19:32,287 | INFO     | mean x: 1773372736.5
[2026-03-13 00:20:33] 2026-03-13 04:19:32,287 | INFO     | mean y: 2753742.15
[2026-03-13 00:20:33] 2026-03-13 04:19:32,287 | INFO     | intersect: 53907760221.392555
[2026-03-13 00:20:33] 2026-03-13 04:19:32,287 | INFO     | chi2: 0.021124211501530606
[2026-03-13 00:20:33] 2026-03-13 04:19:32,287 | INFO     | current memory leak: -30.40 B/s (using 80 data points, chi2=0.02)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | could have reported an average CPU frequency of 2506 MHz (7 samples)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | ..............................
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . Timing measurements:
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . get job = 0 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . initial setup = 6 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . payload setup = 4 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . stage-in = 0 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . payload execution = 7074 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,288 | INFO     | . stage-out = 0 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,289 | INFO     | . log creation = 0 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,289 | INFO     | ..............................
[2026-03-13 00:20:33] 2026-03-13 04:19:32,364 | INFO     | 
[2026-03-13 00:20:33] 2026-03-13 04:19:32,364 | INFO     | job summary report
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | --------------------------------------------------
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | PanDA job id: 7051653228
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | task id: 48967067
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | errors: (none)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | pilot state: finished 
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | transexitcode: 0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | exeerrorcode: 0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | exeerrordiag: 
[2026-03-13 00:20:33] 2026-03-13 04:19:32,365 | INFO     | exitcode: 0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | exitmsg: OK
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | cpuconsumptiontime: 77740 s
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | nevents: 400
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | neventsw: 0
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | pid: 560442
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | pgrp: 560442
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | corecount: 12
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | event service: False
[2026-03-13 00:20:33] 2026-03-13 04:19:32,366 | INFO     | sizes: {0: 2280025, 1: 2280287, 11: 2280315, 7082: 2307632, 7083: 2316700, 7084: 2316838}
[2026-03-13 00:20:33] 2026-03-13 04:19:32,367 | INFO     | --------------------------------------------------
[2026-03-13 00:20:33] 2026-03-13 04:19:32,367 | INFO     | 
[2026-03-13 00:20:33] 2026-03-13 04:19:32,367 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-13 00:20:33] 2026-03-13 04:19:32,381 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 00:20:33] 2026-03-13 04:19:32,384 | INFO     | job 7051653228 has completed (purged errors)
[2026-03-13 00:20:33] 2026-03-13 04:19:32,384 | INFO     | overall cleanup function is called
[2026-03-13 00:20:33] 2026-03-13 04:19:33,393 | INFO     | --- collectZombieJob: --- 10, [560442]
[2026-03-13 00:20:33] 2026-03-13 04:19:33,393 | INFO     | zombie collector waiting for pid 560442
[2026-03-13 00:20:33] 2026-03-13 04:19:33,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 00:20:33] 2026-03-13 04:19:33,393 | INFO     | collected zombie processes
[2026-03-13 00:20:33] 2026-03-13 04:19:33,393 | INFO     | will attempt to kill all subprocesses of pid=560442
[2026-03-13 00:20:33] 2026-03-13 04:19:33,583 | INFO     | process IDs to be killed: [560442] (in reverse order)
[2026-03-13 00:20:33] 2026-03-13 04:19:33,647 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 00:20:33] 2026-03-13 04:19:33,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 00:20:33] 2026-03-13 04:19:33,654 | INFO     | did not find any defunct processes belonging to 560442
[2026-03-13 00:20:33] 2026-03-13 04:19:33,657 | INFO     | did not find any defunct processes belonging to 560442
[2026-03-13 00:20:33] 2026-03-13 04:19:33,657 | INFO     | ready for new job
[2026-03-13 00:20:33] 2026-03-13 04:19:33,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 00:20:33] 2026-03-13 04:19:33,659 | INFO     | **************************************
[2026-03-13 00:20:33] 2026-03-13 04:19:33,659 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 00:20:33] 2026-03-13 04:19:33,659 | INFO     | **************************************
[2026-03-13 00:20:33] 2026-03-13 04:19:33,659 | INFO     | 
[2026-03-13 00:20:33] 2026-03-13 04:19:33,682 | INFO     | architecture information:
[2026-03-13 00:20:33] 2026-03-13 04:19:33,683 | INFO     | executing command: cat /etc/os-release
[2026-03-13 00:20:33] 2026-03-13 04:19:33,693 | INFO     | cat /etc/os-release:
[2026-03-13 00:20:33] NAME="CentOS Linux"
[2026-03-13 00:20:33] VERSION="7 (Core)"
[2026-03-13 00:20:33] ID="centos"
[2026-03-13 00:20:33] ID_LIKE="rhel fedora"
[2026-03-13 00:20:33] VERSION_ID="7"
[2026-03-13 00:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 00:20:33] ANSI_COLOR="0;31"
[2026-03-13 00:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 00:20:33] HOME_URL="https://www.centos.org/"
[2026-03-13 00:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 00:20:33] 
[2026-03-13 00:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 00:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 00:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 00:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 00:20:33] 
[2026-03-13 00:20:33] 2026-03-13 04:19:33,693 | INFO     | **************************************
[2026-03-13 00:20:33] 2026-03-13 04:19:34,195 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-13 00:20:33] 2026-03-13 04:19:34,210 | INFO     | sufficient remaining disk space (398513405952 B)
[2026-03-13 00:20:33] 2026-03-13 04:19:34,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 00:20:33] 2026-03-13 04:19:34,211 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 00:20:33] 2026-03-13 04:19:34,211 | INFO     | update_server=False
[2026-03-13 00:20:33] 2026-03-13 04:19:34,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 00:20:33] 2026-03-13 04:19:34,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 00:20:33] 2026-03-13 04:19:34,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 00:20:33] 2026-03-13 04:19:34,212 | INFO     | aborting loop
[2026-03-13 00:20:33] 2026-03-13 04:19:34,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 00:20:33] 2026-03-13 04:19:35,082 | INFO     | all job control threads have been joined
[2026-03-13 00:20:33] 2026-03-13 04:19:35,140 | INFO     | all data control threads have been joined
[2026-03-13 00:20:33] 2026-03-13 04:19:35,217 | INFO     | [job] retrieve thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:35,217 | INFO     | [job] queue monitor thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:35,218 | INFO     | [job] job monitor thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:35,305 | INFO     | [data] copytool_in thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:35,505 | INFO     | all payload control threads have been joined
[2026-03-13 00:20:33] 2026-03-13 04:19:35,980 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:35,980 | INFO     | [job] validate thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:35,988 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,086 | INFO     | [job] control thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,142 | INFO     | [data] control thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,231 | INFO     | [data] copytool_out thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,356 | INFO     | [payload] validate_post thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,507 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,511 | INFO     | [payload] control thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:36,783 | INFO     | [payload] failed_post thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:19:37,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 00:20:33] 2026-03-13 04:19:41,317 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 00:20:33] 2026-03-13 04:20:05,393 | INFO     | PID=555652 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 00:20:33] 2026-03-13 04:20:05,393 | INFO     | .. there are 4 such processes running
[2026-03-13 00:20:33] 2026-03-13 04:20:05,394 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 00:20:33] 2026-03-13 04:20:05,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 00:20:33] 2026-03-13 04:20:05,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 00:20:33] 2026-03-13 04:20:27,626 | INFO     | [monitor] cgroup control has ended
[2026-03-13 00:20:33] 2026-03-13 04:20:28,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713746556736)>', '<ExcThread(monitor, started 139713306408704)>']
[2026-03-13 00:20:33] 2026-03-13 04:20:28,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 00:20:33] 2026-03-13 04:20:28,506 | INFO     | [monitor] control thread has ended
[2026-03-13 00:20:33] 2026-03-13 04:20:33,254 | INFO     | all workflow threads have been joined
[2026-03-13 00:20:33] 2026-03-13 04:20:33,255 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 00:20:33] 2026-03-13 04:20:33,255 | INFO     | traces error code: 0
[2026-03-13 00:20:33] 2026-03-13 04:20:33,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 00:20:33] 2026-03-13 04:20:33,485 [wrapper] ==== pilot stdout END ====
[2026-03-13 00:20:33] 2026-03-13 04:20:33,488 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 00:20:33] 2026-03-13 04:20:33,491 [wrapper] pilotpid: 555652
[2026-03-13 00:20:33] 2026-03-13 04:20:33,493 [wrapper] Pilot exit status: 0
[2026-03-13 00:20:33] 2026-03-13 04:20:33,501 [wrapper] pandaids: 7051653228
[2026-03-13 00:20:33] 2026-03-13 04:20:33,553 [wrapper] cleanup supervisor_pilot  654458 555653
[2026-03-13 00:20:33] 2026-03-13 04:20:33,556 [wrapper] Test setup, not cleaning
[2026-03-13 00:20:33] 2026-03-13 04:20:33,559 [wrapper] apfmon messages muted
[2026-03-13 00:20:33] 2026-03-13 04:20:33,561 [wrapper] ==== wrapper stdout END ====
[2026-03-13 00:20:33] 2026-03-13 04:20:33,563 [wrapper] ==== wrapper stderr END ====
[2026-03-13 00:20:33]  *** Error codes and diagnostics ***
[2026-03-13 00:20:33]     "exeErrorCode": 0,
[2026-03-13 00:20:33]     "exeErrorDiag": "",
[2026-03-13 00:20:33]     "pilotErrorCode": 0,
[2026-03-13 00:20:33]     "pilotErrorDiag": "",
[2026-03-13 00:20:33]  *** Listing of results directory ***
[2026-03-13 00:20:33] total 514820
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc    585013 Mar 12 06:21 pilot3.tar.gz
[2026-03-13 00:20:33] -rwx------ 1 boinc boinc     36322 Mar 12 06:24 runpilot2-wrapper.sh
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc      5111 Mar 12 06:26 queuedata.json
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc       100 Mar 12 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 00:20:33] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 22:21 run_atlas
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc       105 Mar 12 22:21 job.xml
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc      7579 Mar 12 22:21 init_data.xml
[2026-03-13 00:20:33] -rw-r--r-- 2 boinc boinc 236363157 Mar 12 22:21 EVNT.48967065._000088.pool.root.1
[2026-03-13 00:20:33] -rw-r--r-- 2 boinc boinc     15845 Mar 12 22:21 start_atlas.sh
[2026-03-13 00:20:33] drwxrwx--x 2 boinc boinc      4096 Mar 12 22:21 shared
[2026-03-13 00:20:33] -rw-r--r-- 2 boinc boinc    597545 Mar 12 22:21 input.tar.gz
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc         0 Mar 12 22:21 boinc_lockfile
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc      2614 Mar 12 22:21 pandaJob.out
[2026-03-13 00:20:33] -rw------- 1 boinc boinc        50 Mar 12 22:21 setup.sh.local
[2026-03-13 00:20:33] -rw------- 1 boinc boinc   1006522 Mar 12 22:21 agis_schedconf.cvmfs.json
[2026-03-13 00:20:33] -rw------- 1 boinc boinc   1511578 Mar 12 22:21 agis_ddmendpoints.agis.ALL.json
[2026-03-13 00:20:33] -rw------- 1 boinc boinc       423 Mar 12 22:21 workernode_map.json
[2026-03-13 00:20:33] drwx------ 5 boinc boinc      4096 Mar 12 22:21 pilot3
[2026-03-13 00:20:33] -rw------- 1 boinc boinc 283974052 Mar 13 00:18 HITS.48967067._002238.pool.root.1
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc       529 Mar 13 00:19 boinc_task_state.xml
[2026-03-13 00:20:33] -rw------- 1 boinc boinc      1043 Mar 13 00:19 memory_monitor_summary.json
[2026-03-13 00:20:33] -rw------- 1 boinc boinc    418518 Mar 13 00:19 log.48967067._002238.job.log.tgz.1
[2026-03-13 00:20:33] -rw------- 1 boinc boinc      6328 Mar 13 00:19 heartbeat.json
[2026-03-13 00:20:33] -rw------- 1 boinc boinc        95 Mar 13 00:20 pilot_heartbeat.json
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc      8192 Mar 13 00:20 boinc_mmap_file
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc        27 Mar 13 00:20 wrapper_checkpoint.txt
[2026-03-13 00:20:33] -rw------- 1 boinc boinc      4826 Mar 13 00:20 pilotlog.txt
[2026-03-13 00:20:33] -rw------- 1 boinc boinc   1029631 Mar 13 00:20 log.48967067._002238.job.log.1
[2026-03-13 00:20:33] -rw------- 1 boinc boinc       357 Mar 13 00:20 output.list
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc       620 Mar 13 00:20 runtime_log
[2026-03-13 00:20:33] -rw------- 1 boinc boinc   1464320 Mar 13 00:20 result.tar.gz
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc      9403 Mar 13 00:20 runtime_log.err
[2026-03-13 00:20:33] -rw------- 1 boinc boinc       651 Mar 13 00:20 JG9MDmWOsK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaujLDmDmTNDo.diag
[2026-03-13 00:20:33] -rw-r--r-- 1 boinc boinc     20757 Mar 13 00:20 stderr.txt
[2026-03-13 00:20:33] HITS file was successfully produced:
[2026-03-13 00:20:33] -rw------- 1 boinc boinc 283974052 Mar 13 00:18 shared/HITS.pool.root.1
[2026-03-13 00:20:33]  *** Contents of shared directory: ***
[2026-03-13 00:20:33] total 510184
[2026-03-13 00:20:33] -rw-r--r-- 2 boinc boinc 236363157 Mar 12 22:21 ATLAS.root_0
[2026-03-13 00:20:33] -rw-r--r-- 2 boinc boinc     15845 Mar 12 22:21 start_atlas.sh
[2026-03-13 00:20:33] -rw-r--r-- 2 boinc boinc    597545 Mar 12 22:21 input.tar.gz
[2026-03-13 00:20:33] -rw------- 1 boinc boinc 283974052 Mar 13 00:18 HITS.pool.root.1
[2026-03-13 00:20:33] -rw------- 1 boinc boinc   1464320 Mar 13 00:20 result.tar.gz
00:20:35 (551292): run_atlas exited; CPU time 77895.687926
00:20:35 (551292): called boinc_finish(0)

</stderr_txt>
]]>

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