Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:57:49 (2239302): wrapper (7.7.26015): starting
07:57:49 (2239302): wrapper: running run_atlas (--nthreads 9)
[2026-03-12 07:57:49] Arguments: --nthreads 9
[2026-03-12 07:57:49] Threads: 9
[2026-03-12 07:57:49] Checking for CVMFS
[2026-03-12 07:57:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 07:57:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 07:57:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 07:57:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 07:57:50] 2.13.3.0 11585 112127 256064 157199 3 430 38158468 40960001 32488 16776704 0 383666403 99.639 357856031 35088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 07:57:50] CVMFS is ok
[2026-03-12 07:57:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 07:57:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 07:57:50] Further information can be found at the LHC@home message board.
[2026-03-12 07:57:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 07:57:50] Checking for apptainer binary...
[2026-03-12 07:57:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 07:57:50] Running /usr/bin/apptainer --version
[2026-03-12 07:57:50] apptainer version 1.4.5-2.el9
[2026-03-12 07:57:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 07:57:50] c-212-9.aglt2.org
[2026-03-12 07:57:50] apptainer works
[2026-03-12 07:57:50] Set ATHENA_PROC_NUMBER=9
[2026-03-12 07:57:50] Set ATHENA_CORE_NUMBER=9
[2026-03-12 07:57:50] Starting ATLAS job with PandaID=7037128954
[2026-03-12 07:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 10:03:47]  *** The last 200 lines of the pilot log: ***
[2026-03-12 10:03:47] 2026-03-12 14:02:49,740 | INFO     | extracted standard info from prmon json
[2026-03-12 10:03:47] 2026-03-12 14:02:49,740 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 10:03:47] 2026-03-12 14:02:49,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 10:03:47] 2026-03-12 14:02:49,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 10:03:47] 2026-03-12 14:02:49,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 10:03:47] 2026-03-12 14:02:49,772 | INFO     | fitting pss+swap vs Time
[2026-03-12 10:03:47] 2026-03-12 14:02:49,773 | INFO     | sum of square deviations: 563077396.6639338
[2026-03-12 10:03:47] 2026-03-12 14:02:49,773 | INFO     | sum of deviations: 18363492231.11476
[2026-03-12 10:03:47] 2026-03-12 14:02:49,796 | INFO     | mean x: 1773320434.1885245
[2026-03-12 10:03:47] 2026-03-12 14:02:49,797 | INFO     | mean y: 2540830.081967213
[2026-03-12 10:03:47] 2026-03-12 14:02:49,797 | INFO     | intersect: -57830283235.370056
[2026-03-12 10:03:47] 2026-03-12 14:02:49,797 | INFO     | chi2: 1.3633790799205185
[2026-03-12 10:03:47] 2026-03-12 14:02:49,797 | INFO     | sum of square deviations: 496636653.65811884
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | sum of deviations: 17508234363.41026
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | mean x: 1773320281.6752136
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | mean y: 2538865.5897435895
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | intersect: -62513400834.526215
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | chi2: 1.3651585908669563
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | current chi2=1.3651585908669563 (change=-0.13052209562593128 %)
[2026-03-12 10:03:47] 2026-03-12 14:02:49,798 | INFO     | right removable region: 116
[2026-03-12 10:03:47] 2026-03-12 14:02:49,799 | INFO     | sum of square deviations: 496622621.6923076
[2026-03-12 10:03:47] 2026-03-12 14:02:49,799 | INFO     | sum of deviations: 2333703068.179488
[2026-03-12 10:03:47] 2026-03-12 14:02:49,799 | INFO     | mean x: 1773320586.7179487
[2026-03-12 10:03:47] 2026-03-12 14:02:49,799 | INFO     | mean y: 2576741.581196581
[2026-03-12 10:03:47] 2026-03-12 14:02:49,799 | INFO     | intersect: -8330518678.0099745
[2026-03-12 10:03:47] 2026-03-12 14:02:49,799 | INFO     | chi2: 0.014729823874577124
[2026-03-12 10:03:47] 2026-03-12 14:02:49,800 | INFO     | current chi2=0.014729823874577124 (change=98.91960907340342 %)
[2026-03-12 10:03:47] 2026-03-12 14:02:49,800 | INFO     | sum of square deviations: 435637868.8571427
[2026-03-12 10:03:47] 2026-03-12 14:02:49,800 | INFO     | sum of deviations: 2366671687.2142854
[2026-03-12 10:03:47] 2026-03-12 14:02:49,824 | INFO     | mean x: 1773320739.2142856
[2026-03-12 10:03:47] 2026-03-12 14:02:49,824 | INFO     | mean y: 2576739.8660714286
[2026-03-12 10:03:47] 2026-03-12 14:02:49,825 | INFO     | intersect: -9631268905.505548
[2026-03-12 10:03:47] 2026-03-12 14:02:49,825 | INFO     | chi2: 0.0006458491178406262
[2026-03-12 10:03:47] 2026-03-12 14:02:49,825 | INFO     | current chi2=0.0006458491178406262 (change=95.61536428853486 %)
[2026-03-12 10:03:47] 2026-03-12 14:02:49,825 | INFO     | sum of square deviations: 379842264.6728967
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | sum of deviations: 1902252420.0
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | mean x: 1773320891.7383177
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | mean y: 2578012.0
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | intersect: -8878224024.736782
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | chi2: 0.000548135439716635
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | current chi2=0.000548135439716635 (change=15.129490065836656 %)
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | left removable region: 30
[2026-03-12 10:03:47] 2026-03-12 14:02:49,826 | INFO     | sum of square deviations: 197216526.80232555
[2026-03-12 10:03:47] 2026-03-12 14:02:49,827 | INFO     | sum of deviations: 835931655.8953489
[2026-03-12 10:03:47] 2026-03-12 14:02:49,827 | INFO     | mean x: 1773321166.2209303
[2026-03-12 10:03:47] 2026-03-12 14:02:49,827 | INFO     | mean y: 2580696.0581395347
[2026-03-12 10:03:47] 2026-03-12 14:02:49,827 | INFO     | intersect: -7513905487.674073
[2026-03-12 10:03:47] 2026-03-12 14:02:49,827 | INFO     | chi2: 0.00010519938136015623
[2026-03-12 10:03:47] 2026-03-12 14:02:49,827 | INFO     | current memory leak: 4.24 B/s (using 86 data points, chi2=0.00)
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | could have reported an average CPU frequency of 3143 MHz (8 samples)
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | ..............................
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . Timing measurements:
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . get job = 0 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . initial setup = 13 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . payload setup = 12 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . stage-in = 0 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . payload execution = 7431 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . stage-out = 0 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,828 | INFO     | . log creation = 0 s
[2026-03-12 10:03:47] 2026-03-12 14:02:49,829 | INFO     | ..............................
[2026-03-12 10:03:47] 2026-03-12 14:02:50,216 | INFO     | 
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | job summary report
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | --------------------------------------------------
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | PanDA job id: 7037128954
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | task id: 48838586
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | errors: (none)
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | pilot state: finished 
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | transexitcode: 0
[2026-03-12 10:03:47] 2026-03-12 14:02:50,217 | INFO     | exeerrorcode: 0
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | exeerrordiag: 
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | exitcode: 0
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | exitmsg: OK
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | cpuconsumptiontime: 37534 s
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | nevents: 400
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | neventsw: 0
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | pid: 2249348
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | pgrp: 2249348
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | corecount: 9
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | event service: False
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | sizes: {0: 2269612, 1: 2280185, 11: 2280213, 7448: 2307749, 7450: 2316747, 7451: 2317125}
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | --------------------------------------------------
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | 
[2026-03-12 10:03:47] 2026-03-12 14:02:50,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 10:03:47] 2026-03-12 14:02:50,387 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,387 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,389 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 10:03:47] 2026-03-12 14:02:50,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,389 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 10:03:47] 2026-03-12 14:02:50,389 | INFO     | job 7037128954 has completed (purged errors)
[2026-03-12 10:03:47] 2026-03-12 14:02:50,389 | INFO     | overall cleanup function is called
[2026-03-12 10:03:47] 2026-03-12 14:02:51,420 | INFO     | --- collectZombieJob: --- 10, [2249348]
[2026-03-12 10:03:47] 2026-03-12 14:02:51,421 | INFO     | zombie collector waiting for pid 2249348
[2026-03-12 10:03:47] 2026-03-12 14:02:51,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 10:03:47] 2026-03-12 14:02:51,421 | INFO     | collected zombie processes
[2026-03-12 10:03:47] 2026-03-12 14:02:51,421 | INFO     | will attempt to kill all subprocesses of pid=2249348
[2026-03-12 10:03:47] 2026-03-12 14:02:52,199 | INFO     | process IDs to be killed: [2249348] (in reverse order)
[2026-03-12 10:03:47] 2026-03-12 14:02:52,379 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 10:03:47] 2026-03-12 14:02:52,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 10:03:47] 2026-03-12 14:02:52,416 | INFO     | did not find any defunct processes belonging to 2249348
[2026-03-12 10:03:47] 2026-03-12 14:02:52,487 | INFO     | did not find any defunct processes belonging to 2249348
[2026-03-12 10:03:47] 2026-03-12 14:02:52,487 | INFO     | ready for new job
[2026-03-12 10:03:47] 2026-03-12 14:02:52,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 10:03:47] 2026-03-12 14:02:52,490 | INFO     | **************************************
[2026-03-12 10:03:47] 2026-03-12 14:02:52,490 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 10:03:47] 2026-03-12 14:02:52,490 | INFO     | **************************************
[2026-03-12 10:03:47] 2026-03-12 14:02:52,491 | INFO     | 
[2026-03-12 10:03:47] 2026-03-12 14:02:52,528 | INFO     | architecture information:
[2026-03-12 10:03:47] 2026-03-12 14:02:52,531 | INFO     | executing command: cat /etc/os-release
[2026-03-12 10:03:47] 2026-03-12 14:02:52,633 | INFO     | cat /etc/os-release:
[2026-03-12 10:03:47] NAME="CentOS Linux"
[2026-03-12 10:03:47] VERSION="7 (Core)"
[2026-03-12 10:03:47] ID="centos"
[2026-03-12 10:03:47] ID_LIKE="rhel fedora"
[2026-03-12 10:03:47] VERSION_ID="7"
[2026-03-12 10:03:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 10:03:47] ANSI_COLOR="0;31"
[2026-03-12 10:03:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 10:03:47] HOME_URL="https://www.centos.org/"
[2026-03-12 10:03:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 10:03:47] 
[2026-03-12 10:03:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 10:03:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 10:03:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 10:03:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 10:03:47] 
[2026-03-12 10:03:47] 2026-03-12 14:02:52,633 | INFO     | **************************************
[2026-03-12 10:03:47] 2026-03-12 14:02:52,825 | WARNING  | process 2249348 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 10:03:47] 2026-03-12 14:02:53,139 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 10:03:47] 2026-03-12 14:02:53,162 | INFO     | sufficient remaining disk space (127252037632 B)
[2026-03-12 10:03:47] 2026-03-12 14:02:53,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 10:03:47] 2026-03-12 14:02:53,163 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 10:03:47] 2026-03-12 14:02:53,163 | INFO     | update_server=False
[2026-03-12 10:03:47] 2026-03-12 14:02:53,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 10:03:47] 2026-03-12 14:02:53,217 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 10:03:47] 2026-03-12 14:02:53,254 | INFO     | all payload control threads have been joined
[2026-03-12 10:03:47] 2026-03-12 14:02:53,381 | INFO     | all data control threads have been joined
[2026-03-12 10:03:47] 2026-03-12 14:02:53,698 | INFO     | number of running child processes to parent process 2249348: 1
[2026-03-12 10:03:47] 2026-03-12 14:02:53,699 | INFO     | maximum number of monitored processes: 6
[2026-03-12 10:03:47] 2026-03-12 14:02:53,699 | INFO     | aborting job monitoring since job object (job id=7037128954) has expired
[2026-03-12 10:03:47] 2026-03-12 14:02:53,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:03:47] 2026-03-12 14:02:53,699 | INFO     | will abort loop
[2026-03-12 10:03:47] 2026-03-12 14:02:54,170 | INFO     | [job] retrieve thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,209 | INFO     | [job] validate thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,259 | INFO     | [payload] control thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,389 | INFO     | [data] control thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 10:03:47] 2026-03-12 14:02:54,555 | INFO     | [data] copytool_in thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,610 | INFO     | all job control threads have been joined
[2026-03-12 10:03:47] 2026-03-12 14:02:54,705 | INFO     | [job] job monitor thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,706 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,850 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,886 | INFO     | [payload] failed_post thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:54,900 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:55,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:03:47] 2026-03-12 14:02:55,327 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:55,615 | INFO     | [job] control thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:55,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 10:03:47] 2026-03-12 14:02:55,688 | INFO     | [payload] validate_post thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:56,243 | INFO     | [job] queue monitor thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:56,430 | INFO     | [data] copytool_out thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:02:59,693 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 10:03:47] 2026-03-12 14:03:22,739 | INFO     | PID=2243560 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 10:03:47] 2026-03-12 14:03:22,739 | INFO     | .. there are 36 such processes running
[2026-03-12 10:03:47] 2026-03-12 14:03:22,740 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 10:03:47] 2026-03-12 14:03:22,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 10:03:47] 2026-03-12 14:03:22,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 10:03:47] 2026-03-12 14:03:39,735 | INFO     | [monitor] cgroup control has ended
[2026-03-12 10:03:47] 2026-03-12 14:03:41,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058387216192)>', '<ExcThread(monitor, started 140058036250368)>']
[2026-03-12 10:03:47] 2026-03-12 14:03:41,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 10:03:47] 2026-03-12 14:03:41,888 | INFO     | [monitor] control thread has ended
[2026-03-12 10:03:47] 2026-03-12 14:03:46,645 | INFO     | all workflow threads have been joined
[2026-03-12 10:03:47] 2026-03-12 14:03:46,646 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 10:03:47] 2026-03-12 14:03:46,646 | INFO     | traces error code: 0
[2026-03-12 10:03:47] 2026-03-12 14:03:46,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 10:03:47] 2026-03-12 14:03:46,930 [wrapper] ==== pilot stdout END ====
[2026-03-12 10:03:47] 2026-03-12 14:03:46,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 10:03:47] 2026-03-12 14:03:46,970 [wrapper] pilotpid: 2243560
[2026-03-12 10:03:47] 2026-03-12 14:03:46,985 [wrapper] Pilot exit status: 0
[2026-03-12 10:03:47] 2026-03-12 14:03:47,102 [wrapper] pandaids: 7037128954
[2026-03-12 10:03:47] 2026-03-12 14:03:47,428 [wrapper] cleanup supervisor_pilot 2702206 2243561
[2026-03-12 10:03:47] 2026-03-12 14:03:47,458 [wrapper] Test setup, not cleaning
[2026-03-12 10:03:47] 2026-03-12 14:03:47,475 [wrapper] apfmon messages muted
[2026-03-12 10:03:47] 2026-03-12 14:03:47,491 [wrapper] ==== wrapper stdout END ====
[2026-03-12 10:03:47] 2026-03-12 14:03:47,523 [wrapper] ==== wrapper stderr END ====
[2026-03-12 10:03:47]  *** Error codes and diagnostics ***
[2026-03-12 10:03:47]     "exeErrorCode": 0,
[2026-03-12 10:03:47]     "exeErrorDiag": "",
[2026-03-12 10:03:47]     "pilotErrorCode": 0,
[2026-03-12 10:03:47]     "pilotErrorDiag": "",
[2026-03-12 10:03:47]  *** Listing of results directory ***
[2026-03-12 10:03:47] total 485212
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 22:50 pilot3.tar.gz
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 22:50 queuedata.json
[2026-03-12 10:03:47] -rwx------. 1 boincer umatlas     36322 Mar  3 22:51 runpilot2-wrapper.sh
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas       100 Mar 12 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 10:03:47] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 07:57 run_atlas
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas       105 Mar 12 07:57 job.xml
[2026-03-12 10:03:47] -rw-r--r--. 2 boincer umatlas 275742094 Mar 12 07:57 EVNT.48220221._000222.pool.root.1
[2026-03-12 10:03:47] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 07:57 start_atlas.sh
[2026-03-12 10:03:47] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 07:57 shared
[2026-03-12 10:03:47] -rw-r--r--. 2 boincer umatlas    597957 Mar 12 07:57 input.tar.gz
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas         0 Mar 12 07:57 boinc_lockfile
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas      2562 Mar 12 07:57 pandaJob.out
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas        57 Mar 12 07:57 setup.sh.local
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas   1006241 Mar 12 07:58 agis_schedconf.cvmfs.json
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas   1511578 Mar 12 07:58 agis_ddmendpoints.agis.ALL.json
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas       429 Mar 12 07:58 workernode_map.json
[2026-03-12 10:03:47] drwx------. 5 boincer umatlas      4096 Mar 12 07:58 pilot3
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas 214465015 Mar 12 10:02 HITS.48838586._005510.pool.root.1
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas       529 Mar 12 10:02 boinc_task_state.xml
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas        95 Mar 12 10:02 pilot_heartbeat.json
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas      1045 Mar 12 10:02 memory_monitor_summary.json
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas    376377 Mar 12 10:02 log.48838586._005510.job.log.tgz.1
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas      6342 Mar 12 10:02 heartbeat.json
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas      6957 Mar 12 10:03 init_data.xml
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 10:03 boinc_mmap_file
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas        27 Mar 12 10:03 wrapper_checkpoint.txt
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas      5342 Mar 12 10:03 pilotlog.txt
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas    980926 Mar 12 10:03 log.48838586._005510.job.log.1
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas       357 Mar 12 10:03 output.list
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas       620 Mar 12 10:03 runtime_log
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas   1372160 Mar 12 10:03 result.tar.gz
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas      9336 Mar 12 10:03 runtime_log.err
[2026-03-12 10:03:47] -rw-------. 1 boincer umatlas       655 Mar 12 10:03 98oKDmfRsH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTLHLDmeFkV7m.diag
[2026-03-12 10:03:47] -rw-r--r--. 1 boincer umatlas     21153 Mar 12 10:03 stderr.txt
[2026-03-12 10:03:48] HITS file was successfully produced:
[2026-03-12 10:03:48] -rw-------. 1 boincer umatlas 214465015 Mar 12 10:02 shared/HITS.pool.root.1
[2026-03-12 10:03:48]  *** Contents of shared directory: ***
[2026-03-12 10:03:48] total 480668
[2026-03-12 10:03:48] -rw-r--r--. 2 boincer umatlas 275742094 Mar 12 07:57 ATLAS.root_0
[2026-03-12 10:03:48] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 07:57 start_atlas.sh
[2026-03-12 10:03:48] -rw-r--r--. 2 boincer umatlas    597957 Mar 12 07:57 input.tar.gz
[2026-03-12 10:03:48] -rw-------. 1 boincer umatlas 214465015 Mar 12 10:02 HITS.pool.root.1
[2026-03-12 10:03:48] -rw-------. 1 boincer umatlas   1372160 Mar 12 10:03 result.tar.gz
10:03:49 (2239302): run_atlas exited; CPU time 37765.260463
10:03:49 (2239302): called boinc_finish(0)

</stderr_txt>
]]>

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