Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-13 04:54:55 (12688): vboxwrapper version 26210
2026-03-13 04:54:55 (12688): BOINC client version: 7.16.5
2026-03-13 04:54:55 (12688): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-03-13 04:54:56 (12688): Successfully copied 'init_data.xml' to the shared directory.
2026-03-13 04:54:56 (12688): Create VM. (boinc_98765d06fede6741, slot#5)
2026-03-13 04:54:56 (12688): Setting Memory Size for VM. (4400MB)
2026-03-13 04:54:57 (12688): Setting CPU Count for VM. (4)
2026-03-13 04:54:57 (12688): Setting Chipset Options for VM.
2026-03-13 04:54:57 (12688): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-13 04:54:57 (12688): Setting Boot Options for VM.
2026-03-13 04:54:58 (12688): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-13 04:54:58 (12688): Enabling VM Network Access.
2026-03-13 04:54:58 (12688): Disabling USB Support for VM.
2026-03-13 04:54:59 (12688): Disabling COM Port Support for VM.
2026-03-13 04:54:59 (12688): Disabling LPT Port Support for VM.
2026-03-13 04:54:59 (12688): Disabling Audio Support for VM.
2026-03-13 04:54:59 (12688): Disabling Clipboard Support for VM.
2026-03-13 04:55:00 (12688): Disabling Drag and Drop Support for VM.
2026-03-13 04:55:00 (12688): Adding storage controller(s) to VM.
2026-03-13 04:55:00 (12688): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-13 04:55:01 (12688): Adding VirtualBox Guest Additions to VM.
2026-03-13 04:55:01 (12688): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-13 04:55:01 (12688): forwarding host port 56227 to guest port 80
2026-03-13 04:55:02 (12688): Enabling remote desktop for VM.
2026-03-13 04:55:02 (12688): Enabling shared directory for VM.
2026-03-13 04:55:03 (12688): Starting VM using VBoxManage interface. (boinc_98765d06fede6741, slot#5)
2026-03-13 04:55:07 (12688): Successfully started VM. (PID = '7136')
2026-03-13 04:55:07 (12688): Reporting VM Process ID to BOINC.
2026-03-13 04:55:07 (12688): Guest Log: BIOS: VirtualBox 5.2.44
2026-03-13 04:55:07 (12688): Guest Log: CPUID EDX: 0x178bfbff
2026-03-13 04:55:07 (12688): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-13 04:55:07 (12688): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-13 04:55:07 (12688): Detected: Web Application Enabled (http://localhost:56227)
2026-03-13 04:55:07 (12688): Detected: Remote Desktop Enabled (localhost:56228)
2026-03-13 04:55:07 (12688): Preference change detected
2026-03-13 04:55:07 (12688): Setting CPU throttle for VM. (100%)
2026-03-13 04:55:07 (12688): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-13 04:55:09 (12688): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-13 04:55:09 (12688): Guest Log: BIOS: Booting from Hard Disk...
2026-03-13 04:55:12 (12688): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-13 04:55:12 (12688): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-13 04:55:12 (12688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-13 04:55:17 (12688): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-13 04:55:17 (12688): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-13 04:55:23 (12688): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000175 main     Log opened 2026-03-13T04:55:21.028719000Z
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000283 main     OS Product: Linux
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000318 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000345 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000378 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000379 main     Process ID: 1303
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.000379 main     Package type: LINUX_64BITS_GENERIC
2026-03-13 04:55:23 (12688): Guest Log: 00:00:00.001284 main     5.2.32 r132073 started. Verbose level = 0
2026-03-13 04:55:23 (12688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-13 04:55:23 (12688): Guest Log: [INFO] Mounting shared directory
2026-03-13 04:55:23 (12688): Guest Log: [INFO] Checking for init_data.xml
2026-03-13 04:55:28 (12688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-13 04:55:28 (12688): Guest Log: [INFO] Detected branch: prod
2026-03-13 04:55:28 (12688): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-13 04:55:28 (12688): Guest Log: Copying input files
2026-03-13 04:55:30 (12688): Guest Log: Copied input files into RunAtlas.
2026-03-13 04:55:30 (12688): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-13 04:55:30 (12688): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-13 04:55:30 (12688): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-13 04:55:30 (12688): Guest Log: Further information can be found at the LHC@home message board.
2026-03-13 04:55:33 (12688): Guest Log: 00:00:10.003672 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 550 060 000ns (GuestNow=1 773 370 532 481 058 000 ns GuestLast=1 773 377 721 031 118 000 ns fSetTimeLastLoop=true )
2026-03-13 04:55:38 (12688): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-13 04:55:38 (12688): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-13 04:55:38 (12688): Guest Log: 2.6.3.0 1580 0 32184 157223 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-13 04:55:39 (12688): Guest Log: copied the webapp to /var/www
2026-03-13 04:55:39 (12688): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-13 04:55:39 (12688): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-13 04:55:39 (12688): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-13 04:55:39 (12688): Guest Log:  *** Starting ATLAS job. (PandaID=7051652786 taskID=48967067) ***
2026-03-13 06:35:10 (12688): Status Report: Elapsed Time: '6000.000000'
2026-03-13 06:35:10 (12688): Status Report: CPU Time: '21847.921875'
2026-03-13 08:15:13 (12688): Status Report: Elapsed Time: '12000.000000'
2026-03-13 08:15:13 (12688): Status Report: CPU Time: '45318.343750'
2026-03-13 09:55:15 (12688): Status Report: Elapsed Time: '18000.000000'
2026-03-13 09:55:15 (12688): Status Report: CPU Time: '68728.093750'
2026-03-13 11:35:18 (12688): Status Report: Elapsed Time: '24000.000000'
2026-03-13 11:35:18 (12688): Status Report: CPU Time: '92532.359375'
2026-03-13 12:11:07 (12688): Guest Log:  *** Job finished ***
2026-03-13 12:11:07 (12688): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:10:55,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:10:59,048 | INFO     | [data] queue_monitor thread has finished
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:01,047 | INFO     | [monitor] cgroup control has ended
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:01,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586990442304)>', '<ExcThread(monitor, started 140586409514752)>']
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:01,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:01,906 | INFO     | [monitor] control thread has ended
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,151 | INFO     | all workflow threads have been joined
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,152 | INFO     | end of generic workflow (traces error code: 0)
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,152 | INFO     | traces error code: 0
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,275 [wrapper] ==== pilot stdout END ====
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,280 [wrapper] ==== wrapper stdout RESUME ====
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,284 [wrapper] pilotpid: 5985
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,289 [wrapper] Pilot exit status: 0
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,336 [wrapper] pandaids: 7051652786
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,374 [wrapper] cleanup supervisor_pilot 31481 5986
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,379 [wrapper] Test setup, not cleaning
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,383 [wrapper] apfmon messages muted
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,389 [wrapper] ==== wrapper stdout END ====
2026-03-13 12:11:07 (12688): Guest Log: 2026-03-13 10:11:06,393 [wrapper] ==== wrapper stderr END ====
2026-03-13 12:11:07 (12688): Guest Log:  *** Error codes and diagnostics ***
2026-03-13 12:11:07 (12688): Guest Log:     "exeErrorCode": 0,
2026-03-13 12:11:07 (12688): Guest Log:     "exeErrorDiag": "",
2026-03-13 12:11:07 (12688): Guest Log:     "pilotErrorCode": 0,
2026-03-13 12:11:07 (12688): Guest Log:     "pilotErrorDiag": "",
2026-03-13 12:11:07 (12688): Guest Log:  *** Listing of results directory ***
2026-03-13 12:11:07 (12688): Guest Log: total 286224
2026-03-13 12:11:07 (12688): Guest Log: -rw-r--r--. 1 atlas atlas    602624 Mar 10 16:47 pilot3.tar.gz
2026-03-13 12:11:07 (12688): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 12 10:21 queuedata.json
2026-03-13 12:11:07 (12688): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 12 10:21 runpilot2-wrapper.sh
2026-03-13 12:11:07 (12688): Guest Log: -rwxr-xr-x. 1 atlas atlas      8898 Mar 13 02:55 init_data.xml
2026-03-13 12:11:07 (12688): Guest Log: -rwxr-xr-x. 1 atlas atlas    616320 Mar 13 02:55 input.tar.gz
2026-03-13 12:11:07 (12688): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 13 02:55 start_atlas.sh
2026-03-13 12:11:07 (12688): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 13 02:55 EVNT.48967065._000077.pool.root.1 -> /data/./ATLAS.root_0
2026-03-13 12:11:07 (12688): Guest Log: -rw-r--r--. 1 atlas atlas      2614 Mar 13 02:55 pandaJob.out
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas   1006522 Mar 13 02:56 agis_schedconf.cvmfs.json
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas       426 Mar 13 02:56 workernode_map.json
2026-03-13 12:11:07 (12688): Guest Log: drwx------. 7 atlas atlas      4096 Mar 13 02:56 pilot3
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas 280826942 Mar 13 10:10 HITS.48967067._001975.pool.root.1
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas      1045 Mar 13 10:10 memory_monitor_summary.json
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas        95 Mar 13 10:10 pilot_heartbeat.json
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 13 10:10 agis_ddmendpoints.agis.ALL.json
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas    571278 Mar 13 10:10 log.48967067._001975.job.log.tgz.1
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas      6377 Mar 13 10:10 heartbeat.json
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas      4794 Mar 13 10:11 pilotlog.txt
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas   3608461 Mar 13 10:11 log.48967067._001975.job.log.1
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas       357 Mar 13 10:11 output.list
2026-03-13 12:11:07 (12688): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 13 10:11 runtime_log
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas   4198400 Mar 13 10:11 result.tar.gz
2026-03-13 12:11:07 (12688): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Mar 13 10:11 runtime_log.err
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas       671 Mar 13 10:11 1PbKDmcLsK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbojLDmV82d1m.diag
2026-03-13 12:11:07 (12688): Guest Log: Looking for outputfile HITS.48967067._001975.pool.root.1
2026-03-13 12:11:07 (12688): Guest Log: HITS file was successfully produced
2026-03-13 12:11:07 (12688): Guest Log: -rw-------. 1 atlas atlas 280826942 Mar 13 10:10 /home/atlas/RunAtlas/HITS.48967067._001975.pool.root.1
2026-03-13 12:11:08 (12688): Guest Log: Successfully finished the ATLAS job!
2026-03-13 12:11:08 (12688): Guest Log: Copying the results back to the shared directory!
2026-03-13 12:11:08 (12688): Guest Log:  *** Contents of shared directory: ***
2026-03-13 12:11:08 (12688): Guest Log: total 511132
2026-03-13 12:11:08 (12688): Guest Log: -rwxrwxrwx. 1 root root 237722821 Mar 13 02:54 ATLAS.root_0
2026-03-13 12:11:08 (12688): Guest Log: -rwxrwxrwx. 1 root root 280826942 Mar 13 10:11 HITS.pool.root.1
2026-03-13 12:11:08 (12688): Guest Log: -rwxrwxrwx. 1 root root      8898 Mar 13 02:54 init_data.xml
2026-03-13 12:11:08 (12688): Guest Log: -rwxrwxrwx. 1 root root    616320 Mar 12 15:11 input.tar.gz
2026-03-13 12:11:08 (12688): Guest Log: -rwxrwxrwx. 1 root root   4198400 Mar 13 10:11 result.tar.gz
2026-03-13 12:11:08 (12688): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 12 15:11 start_atlas.sh
2026-03-13 12:11:08 (12688): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-13 12:11:08 (12688): VM Completion File Detected.
2026-03-13 12:11:08 (12688): Powering off VM.
2026-03-13 12:11:09 (12688): Successfully stopped VM.
2026-03-13 12:11:09 (12688): Deregistering VM. (boinc_98765d06fede6741, slot#5)
2026-03-13 12:11:09 (12688): Removing network bandwidth throttle group from VM.
2026-03-13 12:11:09 (12688): Removing VM from VirtualBox.
2026-03-13 12:11:15 (12688): called boinc_finish(0)

</stderr_txt>
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