Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:29:34 (994951): wrapper (7.7.26015): starting
06:29:34 (994951): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 06:29:34] Arguments: --nthreads 4
[2026-03-12 06:29:34] Threads: 4
[2026-03-12 06:29:34] Checking for CVMFS
[2026-03-12 06:29:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 06:29:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 06:29:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 06:29:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 06:29:36] 2.13.3.0 8639 2778 50408 157197 0 50 2798274 4096001 2748 130560 0 2351887 99.991 101417 1052 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-12 06:29:36] CVMFS is ok
[2026-03-12 06:29:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 06:29:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-12 06:29:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-12 06:29:36] Further information can be found at the LHC@home message board.
[2026-03-12 06:29:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:29:36] Checking for apptainer binary...
[2026-03-12 06:29:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 06:29:36] Running /usr/bin/apptainer --version
[2026-03-12 06:29:36] apptainer version 1.4.5
[2026-03-12 06:29:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:29:37] SETI64-Ubuntu
[2026-03-12 06:29:37] apptainer works
[2026-03-12 06:29:37] Set ATHENA_PROC_NUMBER=4
[2026-03-12 06:29:37] Set ATHENA_CORE_NUMBER=4
[2026-03-12 06:29:37] Starting ATLAS job with PandaID=7037166959
[2026-03-12 06:29:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/53 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:43:15]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:43:15] 2026-03-12 12:42:28,668 | INFO     | this job has now completed (state=finished)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,668 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:43:15] 2026-03-12 12:42:28,668 | INFO     | job 7037166959 has finished - writing final server update
[2026-03-12 08:43:15] 2026-03-12 12:42:28,668 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,693 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/53/PanDA_Pilot-7037166959/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,694 | INFO     | extracted standard info from prmon json
[2026-03-12 08:43:15] 2026-03-12 12:42:28,694 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:43:15] 2026-03-12 12:42:28,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:43:15] 2026-03-12 12:42:28,694 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:43:15] 2026-03-12 12:42:28,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:43:15] 2026-03-12 12:42:28,697 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:43:15] 2026-03-12 12:42:28,697 | INFO     | sum of square deviations: 681212772.5
[2026-03-12 08:43:15] 2026-03-12 12:42:28,698 | INFO     | sum of deviations: -19819991229.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,698 | INFO     | mean x: 1773315355.5
[2026-03-12 08:43:15] 2026-03-12 12:42:28,698 | INFO     | mean y: 2406016.8307692306
[2026-03-12 08:43:15] 2026-03-12 12:42:28,699 | INFO     | intersect: 51597291214.408325
[2026-03-12 08:43:15] 2026-03-12 12:42:28,699 | INFO     | chi2: 1.6440691569152448
[2026-03-12 08:43:15] 2026-03-12 12:42:28,699 | INFO     | sum of square deviations: 605592750.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,700 | INFO     | sum of deviations: -18486629377.999996
[2026-03-12 08:43:15] 2026-03-12 12:42:28,700 | INFO     | mean x: 1773315203.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,700 | INFO     | mean y: 2408707.096
[2026-03-12 08:43:15] 2026-03-12 12:42:28,700 | INFO     | intersect: 54135521972.13068
[2026-03-12 08:43:15] 2026-03-12 12:42:28,700 | INFO     | chi2: 1.6378547777739176
[2026-03-12 08:43:15] 2026-03-12 12:42:28,701 | INFO     | current chi2=1.6378547777739176 (change=0.3779876968793186 %)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,701 | INFO     | right removable region: 124
[2026-03-12 08:43:15] 2026-03-12 12:42:28,701 | INFO     | sum of square deviations: 605592750.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,702 | INFO     | sum of deviations: -34929107702.99999
[2026-03-12 08:43:15] 2026-03-12 12:42:28,702 | INFO     | mean x: 1773315508.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,702 | INFO     | mean y: 2435749.096
[2026-03-12 08:43:15] 2026-03-12 12:42:28,702 | INFO     | intersect: 102282934269.48308
[2026-03-12 08:43:15] 2026-03-12 12:42:28,702 | INFO     | chi2: 0.2757695365726255
[2026-03-12 08:43:15] 2026-03-12 12:42:28,702 | INFO     | current chi2=0.2757695365726255 (change=83.22640289110163 %)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,703 | INFO     | sum of square deviations: 535786790.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,703 | INFO     | sum of deviations: -29912875396.500004
[2026-03-12 08:43:15] 2026-03-12 12:42:28,703 | INFO     | mean x: 1773315660.5
[2026-03-12 08:43:15] 2026-03-12 12:42:28,703 | INFO     | mean y: 2424774.908333333
[2026-03-12 08:43:15] 2026-03-12 12:42:28,704 | INFO     | intersect: 99006303521.52432
[2026-03-12 08:43:15] 2026-03-12 12:42:28,704 | INFO     | chi2: 0.27303801397694644
[2026-03-12 08:43:15] 2026-03-12 12:42:28,704 | INFO     | current chi2=0.27303801397694644 (change=0.9905091873553212 %)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,704 | INFO     | left removable region: 20
[2026-03-12 08:43:15] 2026-03-12 12:42:28,704 | INFO     | sum of square deviations: 348769330.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,705 | INFO     | sum of deviations: -17416000749.0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,705 | INFO     | mean x: 1773315782.5
[2026-03-12 08:43:15] 2026-03-12 12:42:28,705 | INFO     | mean y: 2399927.230769231
[2026-03-12 08:43:15] 2026-03-12 12:42:28,705 | INFO     | intersect: 88553962062.1052
[2026-03-12 08:43:15] 2026-03-12 12:42:28,705 | INFO     | chi2: 0.23195830016971605
[2026-03-12 08:43:15] 2026-03-12 12:42:28,705 | INFO     | current memory leak: -49.94 B/s (using 104 data points, chi2=0.23)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | could have reported an average CPU frequency of 2471 MHz (8 samples)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | ..............................
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | . Timing measurements:
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | . get job = 0 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | . initial setup = 8 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | . payload setup = 6 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | . stage-in = 0 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,706 | INFO     | . payload execution = 7926 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,707 | INFO     | . stage-out = 0 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,707 | INFO     | . log creation = 0 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,707 | INFO     | ..............................
[2026-03-12 08:43:15] 2026-03-12 12:42:28,803 | INFO     | 
[2026-03-12 08:43:15] 2026-03-12 12:42:28,803 | INFO     | job summary report
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | --------------------------------------------------
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | PanDA job id: 7037166959
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | task id: 48936087
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | errors: (none)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | pilot state: finished 
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | transexitcode: 0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | exeerrorcode: 0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | exeerrordiag: 
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | exitcode: 0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,804 | INFO     | exitmsg: OK
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | cpuconsumptiontime: 30787 s
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | nevents: 400
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | neventsw: 0
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | pid: 1004519
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | pgrp: 1004519
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | corecount: 4
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | event service: False
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | sizes: {0: 2279792, 1: 2280253, 11: 2280253, 7937: 2307819, 7938: 2316847, 7940: 2317225}
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | --------------------------------------------------
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | 
[2026-03-12 08:43:15] 2026-03-12 12:42:28,805 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/53
[2026-03-12 08:43:15] 2026-03-12 12:42:28,831 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,831 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,833 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:43:15] 2026-03-12 12:42:28,833 | INFO     | job 7037166959 has completed (purged errors)
[2026-03-12 08:43:15] 2026-03-12 12:42:28,833 | INFO     | overall cleanup function is called
[2026-03-12 08:43:15] 2026-03-12 12:42:29,842 | INFO     | --- collectZombieJob: --- 10, [1004519]
[2026-03-12 08:43:15] 2026-03-12 12:42:29,842 | INFO     | zombie collector waiting for pid 1004519
[2026-03-12 08:43:15] 2026-03-12 12:42:29,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:43:15] 2026-03-12 12:42:29,843 | INFO     | collected zombie processes
[2026-03-12 08:43:15] 2026-03-12 12:42:29,843 | INFO     | will attempt to kill all subprocesses of pid=1004519
[2026-03-12 08:43:15] 2026-03-12 12:42:30,332 | INFO     | process IDs to be killed: [1004519] (in reverse order)
[2026-03-12 08:43:15] 2026-03-12 12:42:30,483 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:43:15] 2026-03-12 12:42:30,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:43:15] 2026-03-12 12:42:30,502 | INFO     | did not find any defunct processes belonging to 1004519
[2026-03-12 08:43:15] 2026-03-12 12:42:30,517 | INFO     | did not find any defunct processes belonging to 1004519
[2026-03-12 08:43:15] 2026-03-12 12:42:30,517 | INFO     | ready for new job
[2026-03-12 08:43:15] 2026-03-12 12:42:30,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:43:15] 2026-03-12 12:42:30,520 | INFO     | **************************************
[2026-03-12 08:43:15] 2026-03-12 12:42:30,520 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 08:43:15] 2026-03-12 12:42:30,520 | INFO     | **************************************
[2026-03-12 08:43:15] 2026-03-12 12:42:30,520 | INFO     | 
[2026-03-12 08:43:15] 2026-03-12 12:42:30,528 | INFO     | architecture information:
[2026-03-12 08:43:15] 2026-03-12 12:42:30,529 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:43:15] 2026-03-12 12:42:30,549 | INFO     | cat /etc/os-release:
[2026-03-12 08:43:15] NAME="CentOS Linux"
[2026-03-12 08:43:15] VERSION="7 (Core)"
[2026-03-12 08:43:15] ID="centos"
[2026-03-12 08:43:15] ID_LIKE="rhel fedora"
[2026-03-12 08:43:15] VERSION_ID="7"
[2026-03-12 08:43:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:43:15] ANSI_COLOR="0;31"
[2026-03-12 08:43:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:43:15] HOME_URL="https://www.centos.org/"
[2026-03-12 08:43:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:43:15] 
[2026-03-12 08:43:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:43:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:43:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:43:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:43:15] 
[2026-03-12 08:43:15] 2026-03-12 12:42:30,549 | INFO     | **************************************
[2026-03-12 08:43:15] 2026-03-12 12:42:31,052 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/53
[2026-03-12 08:43:15] 2026-03-12 12:42:31,073 | INFO     | sufficient remaining disk space (377231507456 B)
[2026-03-12 08:43:15] 2026-03-12 12:42:31,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:43:15] 2026-03-12 12:42:31,074 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:43:15] 2026-03-12 12:42:31,074 | INFO     | update_server=False
[2026-03-12 08:43:15] 2026-03-12 12:42:31,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:43:15] 2026-03-12 12:42:31,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:43:15] 2026-03-12 12:42:31,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:43:15] 2026-03-12 12:42:31,426 | INFO     | all data control threads have been joined
[2026-03-12 08:43:15] 2026-03-12 12:42:31,894 | INFO     | all payload control threads have been joined
[2026-03-12 08:43:15] 2026-03-12 12:42:32,079 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:32,289 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:32,432 | INFO     | [data] control thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:32,513 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:32,621 | INFO     | [job] validate thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:32,750 | INFO     | all job control threads have been joined
[2026-03-12 08:43:15] 2026-03-12 12:42:32,857 | WARNING  | process 1004519 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 08:43:15] 2026-03-12 12:42:32,898 | INFO     | [payload] control thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:32,981 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:33,051 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:33,079 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:33,216 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/53/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:43:15] 2026-03-12 12:42:33,433 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:33,500 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:33,704 | INFO     | number of running child processes to parent process 1004519: 1
[2026-03-12 08:43:15] 2026-03-12 12:42:33,704 | INFO     | maximum number of monitored processes: 6
[2026-03-12 08:43:15] 2026-03-12 12:42:33,704 | INFO     | aborting job monitoring since job object (job id=7037166959) has expired
[2026-03-12 08:43:15] 2026-03-12 12:42:33,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:43:15] 2026-03-12 12:42:33,705 | INFO     | will abort loop
[2026-03-12 08:43:15] 2026-03-12 12:42:33,755 | INFO     | [job] control thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:33,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:43:15] 2026-03-12 12:42:34,710 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:34,819 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:35,080 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:42:41,394 | INFO     | job.realtimelogging is not enabled
[2026-03-12 08:43:15] 2026-03-12 12:42:42,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:43:15] 2026-03-12 12:43:01,252 | INFO     | PID=999516 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 08:43:15] 2026-03-12 12:43:01,252 | INFO     | .. there are 4 such processes running
[2026-03-12 08:43:15] 2026-03-12 12:43:01,253 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:43:15] 2026-03-12 12:43:01,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:43:15] 2026-03-12 12:43:01,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:43:15] 2026-03-12 12:43:09,939 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:43:15] 2026-03-12 12:43:10,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139465470261056)>', '<ExcThread(monitor, started 139465195800320)>']
[2026-03-12 08:43:15] 2026-03-12 12:43:11,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:43:15] 2026-03-12 12:43:11,292 | INFO     | [monitor] control thread has ended
[2026-03-12 08:43:15] 2026-03-12 12:43:15,354 | INFO     | all workflow threads have been joined
[2026-03-12 08:43:15] 2026-03-12 12:43:15,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:43:15] 2026-03-12 12:43:15,355 | INFO     | traces error code: 0
[2026-03-12 08:43:15] 2026-03-12 12:43:15,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:43:15] 2026-03-12 12:43:15,508 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:43:15] 2026-03-12 12:43:15,511 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:43:15] 2026-03-12 12:43:15,515 [wrapper] pilotpid: 999516
[2026-03-12 08:43:15] 2026-03-12 12:43:15,517 [wrapper] Pilot exit status: 0
[2026-03-12 08:43:15] 2026-03-12 12:43:15,531 [wrapper] pandaids: 7037166959
[2026-03-12 08:43:15] 2026-03-12 12:43:15,616 [wrapper] cleanup supervisor_pilot 1058850 999517
[2026-03-12 08:43:15] 2026-03-12 12:43:15,618 [wrapper] Test setup, not cleaning
[2026-03-12 08:43:15] 2026-03-12 12:43:15,621 [wrapper] apfmon messages muted
[2026-03-12 08:43:15] 2026-03-12 12:43:15,623 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:43:15] 2026-03-12 12:43:15,625 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:43:15]  *** Error codes and diagnostics ***
[2026-03-12 08:43:15]     "exeErrorCode": 0,
[2026-03-12 08:43:15]     "exeErrorDiag": "",
[2026-03-12 08:43:15]     "pilotErrorCode": 0,
[2026-03-12 08:43:15]     "pilotErrorDiag": "",
[2026-03-12 08:43:15]  *** Listing of results directory ***
[2026-03-12 08:43:15] total 438248
[2026-03-12 08:43:15] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  3 22:50 pilot3.tar.gz
[2026-03-12 08:43:15] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  3 22:50 queuedata.json
[2026-03-12 08:43:15] -rwx------ 1 whitlerd whitlerd     36322 Mar  3 22:50 runpilot2-wrapper.sh
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 12 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:43:15] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 12 06:29 run_atlas
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 12 06:29 job.xml
[2026-03-12 08:43:15] -rw-r--r-- 2 whitlerd whitlerd 260860934 Mar 12 06:29 EVNT.48564634._000021.pool.root.1
[2026-03-12 08:43:15] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 12 06:29 shared
[2026-03-12 08:43:15] -rw-r--r-- 2 whitlerd whitlerd    597945 Mar 12 06:29 input.tar.gz
[2026-03-12 08:43:15] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 12 06:29 start_atlas.sh
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar 12 06:29 init_data.xml
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 12 06:29 boinc_setup_complete
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 12 06:29 boinc_lockfile
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd      2551 Mar 12 06:29 pandaJob.out
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd   1006241 Mar 12 06:29 agis_schedconf.cvmfs.json
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd   1511578 Mar 12 06:29 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd       424 Mar 12 06:29 workernode_map.json
[2026-03-12 08:43:15] drwx------ 5 whitlerd whitlerd      4096 Mar 12 06:29 pilot3
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd 181053006 Mar 12 08:41 HITS.48936087._000073.pool.root.1
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar 12 08:41 boinc_task_state.xml
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd      1022 Mar 12 08:42 memory_monitor_summary.json
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd    326598 Mar 12 08:42 log.48936087._000073.job.log.tgz.1
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd      6278 Mar 12 08:42 heartbeat.json
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd        95 Mar 12 08:43 pilot_heartbeat.json
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 12 08:43 boinc_mmap_file
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 12 08:43 wrapper_checkpoint.txt
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd      5442 Mar 12 08:43 pilotlog.txt
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd   1129872 Mar 12 08:43 log.48936087._000073.job.log.1
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd       357 Mar 12 08:43 output.list
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 12 08:43 runtime_log
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd   1474560 Mar 12 08:43 result.tar.gz
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar 12 08:43 runtime_log.err
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd       648 Mar 12 08:43 2opNDmMRsH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNJHLDmBNneZm.diag
[2026-03-12 08:43:15] -rw-rw-r-- 1 whitlerd whitlerd     21327 Mar 12 08:43 stderr.txt
[2026-03-12 08:43:15] HITS file was successfully produced:
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd 181053006 Mar 12 08:41 shared/HITS.pool.root.1
[2026-03-12 08:43:15]  *** Contents of shared directory: ***
[2026-03-12 08:43:15] total 433608
[2026-03-12 08:43:15] -rw-r--r-- 2 whitlerd whitlerd 260860934 Mar 12 06:29 ATLAS.root_0
[2026-03-12 08:43:15] -rw-r--r-- 2 whitlerd whitlerd    597945 Mar 12 06:29 input.tar.gz
[2026-03-12 08:43:15] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 12 06:29 start_atlas.sh
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd 181053006 Mar 12 08:41 HITS.pool.root.1
[2026-03-12 08:43:15] -rw------- 1 whitlerd whitlerd   1474560 Mar 12 08:43 result.tar.gz
08:43:17 (994951): run_atlas exited; CPU time 31178.199077
08:43:17 (994951): called boinc_finish(0)

</stderr_txt>
]]>

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