Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:28:40 (3133946): wrapper (7.7.26015): starting
11:28:40 (3133946): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 11:28:40] Arguments: --nthreads 12
[2026-03-12 11:28:40] Threads: 12
[2026-03-12 11:28:40] Checking for CVMFS
[2026-03-12 11:28:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 11:28:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 11:28:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 11:28:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 11:28:43] 2.11.0.0 2863378 64 48348 157199 3 50 3851246 6144000 14770 130560 0 677272 99.997 5587 748 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-12 11:28:43] CVMFS is ok
[2026-03-12 11:28:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 11:28:43] Checking for apptainer binary...
[2026-03-12 11:28:43] apptainer is not installed, using version from CVMFS
[2026-03-12 11:28:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 11:28:44] radiat0r
[2026-03-12 11:28:44] apptainer works
[2026-03-12 11:28:44] Set ATHENA_PROC_NUMBER=12
[2026-03-12 11:28:44] Set ATHENA_CORE_NUMBER=12
[2026-03-12 11:28:44] Starting ATLAS job with PandaID=7037260783
[2026-03-12 11:28:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 12:17:36]  *** The last 200 lines of the pilot log: ***
[2026-03-12 12:17:36]  status=None
[2026-03-12 12:17:36]  status_code=0
[2026-03-12 12:17:36]  storage_token=
[2026-03-12 12:17:36]  surl=/var/lib/boinc/slots/11/PanDA_Pilot-7037260783/log.48937817._000183.job.log.tgz.1
[2026-03-12 12:17:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/58/log.48937817._000183.job.log.tgz.1
[2026-03-12 12:17:36]  workdir=None
[2026-03-12 12:17:36] ]
[2026-03-12 12:17:36] 2026-03-12 12:16:59,231 | INFO     | transferring file log.48937817._000183.job.log.tgz.1 from /var/lib/boinc/slots/11/PanDA_Pilot-7037260783/log.48937817._000183.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-12 12:17:36] 2026-03-12 12:16:59,231 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/11/PanDA_Pilot-7037260783/log.48937817._000183.job.log.tgz.1 /var/lib/boinc/slots/11/log.48937817._000183.j
[2026-03-12 12:17:36] 2026-03-12 12:16:59,258 | INFO     | adding to output.list: log.48937817._000183.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/58/log.48937817._000183.job.log.tg
[2026-03-12 12:17:36] 2026-03-12 12:16:59,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 12:17:36] 2026-03-12 12:16:59,260 | INFO     | summary of transferred files:
[2026-03-12 12:17:36] 2026-03-12 12:16:59,260 | INFO     |  -- lfn=log.48937817._000183.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 12:17:36] 2026-03-12 12:16:59,260 | INFO     | stage-out finished correctly
[2026-03-12 12:17:36] 2026-03-12 12:16:59,677 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 12:17:36] 2026-03-12 12:16:59,735 | INFO     | time since job start (2866s) is within the limit (349056.0s)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,887 | INFO     | job 7037260783 has state=finished
[2026-03-12 12:17:36] 2026-03-12 12:16:59,887 | INFO     | preparing for final server update for job 7037260783 in state='finished'
[2026-03-12 12:17:36] 2026-03-12 12:16:59,888 | INFO     | reading metadata from: /var/lib/boinc/slots/11/PanDA_Pilot-7037260783/jobReport.json
[2026-03-12 12:17:36] 2026-03-12 12:16:59,890 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/11/workernode_map.json
[2026-03-12 12:17:36] 2026-03-12 12:16:59,891 | INFO     | this job has now completed (state=finished)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,891 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,891 | INFO     | log transfer has been attempted: DONE
[2026-03-12 12:17:36] 2026-03-12 12:16:59,891 | INFO     | job 7037260783 has finished - writing final server update
[2026-03-12 12:17:36] 2026-03-12 12:16:59,891 | INFO     | total number of processed events: 400 (read)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,962 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7037260783/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,963 | INFO     | extracted standard info from prmon json
[2026-03-12 12:17:36] 2026-03-12 12:16:59,963 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 12:17:36] 2026-03-12 12:16:59,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 12:17:36] 2026-03-12 12:16:59,963 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 12:17:36] 2026-03-12 12:16:59,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 12:17:36] 2026-03-12 12:16:59,965 | INFO     | fitting pss+swap vs Time
[2026-03-12 12:17:36] 2026-03-12 12:16:59,965 | INFO     | sum of square deviations: 19832930.0
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | sum of deviations: 129825995.0
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | mean x: 1773316476.5
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | mean y: 2711313.25
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | intersect: -11605385725.942223
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | chi2: 0.00048047251382142585
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | current memory leak: 6.55 B/s (using 40 data points, chi2=0.00)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,966 | INFO     | could have reported an average CPU frequency of 2313 MHz (5 samples)
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | ..............................
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . Timing measurements:
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . get job = 0 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . initial setup = 9 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . payload setup = 9 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . stage-in = 0 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . payload execution = 2840 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . stage-out = 0 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | . log creation = 0 s
[2026-03-12 12:17:36] 2026-03-12 12:16:59,967 | INFO     | ..............................
[2026-03-12 12:17:36] 2026-03-12 12:17:00,068 | INFO     | 
[2026-03-12 12:17:36] 2026-03-12 12:17:00,068 | INFO     | job summary report
[2026-03-12 12:17:36] 2026-03-12 12:17:00,068 | INFO     | --------------------------------------------------
[2026-03-12 12:17:36] 2026-03-12 12:17:00,068 | INFO     | PanDA job id: 7037260783
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | task id: 48937817
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | errors: (none)
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | pilot state: finished 
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | transexitcode: 0
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | exeerrorcode: 0
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | exeerrordiag: 
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | exitcode: 0
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | exitmsg: OK
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | cpuconsumptiontime: 30096 s
[2026-03-12 12:17:36] 2026-03-12 12:17:00,069 | INFO     | nevents: 400
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | neventsw: 0
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | pid: 3144637
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | pgrp: 3144637
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | corecount: 12
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | event service: False
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | sizes: {0: 2279953, 1: 2280215, 11: 2280243, 2853: 2305566, 2854: 2305565, 2855: 2314975}
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | --------------------------------------------------
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | 
[2026-03-12 12:17:36] 2026-03-12 12:17:00,070 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-12 12:17:36] 2026-03-12 12:17:00,104 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 12:17:36] 2026-03-12 12:17:00,106 | INFO     | job 7037260783 has completed (purged errors)
[2026-03-12 12:17:36] 2026-03-12 12:17:00,107 | INFO     | overall cleanup function is called
[2026-03-12 12:17:36] 2026-03-12 12:17:01,114 | INFO     | --- collectZombieJob: --- 10, [3144637]
[2026-03-12 12:17:36] 2026-03-12 12:17:01,115 | INFO     | zombie collector waiting for pid 3144637
[2026-03-12 12:17:36] 2026-03-12 12:17:01,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 12:17:36] 2026-03-12 12:17:01,116 | INFO     | collected zombie processes
[2026-03-12 12:17:36] 2026-03-12 12:17:01,116 | INFO     | will attempt to kill all subprocesses of pid=3144637
[2026-03-12 12:17:36] 2026-03-12 12:17:03,071 | INFO     | PID=3139007 has CPU usage=22.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 12:17:36] 2026-03-12 12:17:03,072 | INFO     | .. there are 17 such processes running
[2026-03-12 12:17:36] 2026-03-12 12:17:03,596 | INFO     | process IDs to be killed: [3144637] (in reverse order)
[2026-03-12 12:17:36] 2026-03-12 12:17:03,876 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 12:17:36] 2026-03-12 12:17:03,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 12:17:36] 2026-03-12 12:17:03,932 | INFO     | did not find any defunct processes belonging to 3144637
[2026-03-12 12:17:36] 2026-03-12 12:17:03,985 | INFO     | did not find any defunct processes belonging to 3144637
[2026-03-12 12:17:36] 2026-03-12 12:17:03,985 | INFO     | ready for new job
[2026-03-12 12:17:36] 2026-03-12 12:17:03,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 12:17:36] 2026-03-12 12:17:03,989 | INFO     | **************************************
[2026-03-12 12:17:36] 2026-03-12 12:17:03,990 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 12:17:36] 2026-03-12 12:17:03,990 | INFO     | **************************************
[2026-03-12 12:17:36] 2026-03-12 12:17:03,990 | INFO     | 
[2026-03-12 12:17:36] 2026-03-12 12:17:04,032 | INFO     | architecture information:
[2026-03-12 12:17:36] 2026-03-12 12:17:04,033 | INFO     | executing command: cat /etc/os-release
[2026-03-12 12:17:36] 2026-03-12 12:17:04,059 | INFO     | cat /etc/os-release:
[2026-03-12 12:17:36] NAME="CentOS Linux"
[2026-03-12 12:17:36] VERSION="7 (Core)"
[2026-03-12 12:17:36] ID="centos"
[2026-03-12 12:17:36] ID_LIKE="rhel fedora"
[2026-03-12 12:17:36] VERSION_ID="7"
[2026-03-12 12:17:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 12:17:36] ANSI_COLOR="0;31"
[2026-03-12 12:17:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 12:17:36] HOME_URL="https://www.centos.org/"
[2026-03-12 12:17:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 12:17:36] 
[2026-03-12 12:17:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 12:17:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 12:17:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 12:17:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 12:17:36] 
[2026-03-12 12:17:36] 2026-03-12 12:17:04,059 | INFO     | **************************************
[2026-03-12 12:17:36] 2026-03-12 12:17:04,159 | WARNING  | process 3144637 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 12:17:36] 2026-03-12 12:17:04,563 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-12 12:17:36] 2026-03-12 12:17:04,591 | INFO     | sufficient remaining disk space (1718451437568 B)
[2026-03-12 12:17:36] 2026-03-12 12:17:04,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 12:17:36] 2026-03-12 12:17:04,592 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 12:17:36] 2026-03-12 12:17:04,592 | INFO     | update_server=False
[2026-03-12 12:17:36] 2026-03-12 12:17:04,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 12:17:36] 2026-03-12 12:17:04,856 | INFO     | using path: /var/lib/boinc/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 12:17:36] 2026-03-12 12:17:04,858 | INFO     | using path: /var/lib/boinc/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 12:17:36] 2026-03-12 12:17:04,858 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 12:17:36] 2026-03-12 12:17:04,858 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 12:17:36] 2026-03-12 12:17:04,859 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/11/PanDA_Pilot-7037260783/payload.stdout) since it has not been created yet
[2026-03-12 12:17:36] 2026-03-12 12:17:04,859 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-12 12:17:36] 2026-03-12 12:17:04,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 12:17:36] 2026-03-12 12:17:04,889 | INFO     | sufficient remaining disk space (1718451437568 B)
[2026-03-12 12:17:36] 2026-03-12 12:17:04,889 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-12 12:17:36] 2026-03-12 12:17:04,889 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/11/PanDA_Pilot-7037260783/HITS.48937817._000183.pool.root.1 since it does not exist
[2026-03-12 12:17:36] 2026-03-12 12:17:05,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 12:17:36] 2026-03-12 12:17:05,459 | INFO     | all data control threads have been joined
[2026-03-12 12:17:36] 2026-03-12 12:17:05,598 | INFO     | [job] retrieve thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:05,661 | INFO     | all job control threads have been joined
[2026-03-12 12:17:36] 2026-03-12 12:17:05,732 | INFO     | number of running child processes to parent process 3144637: 1
[2026-03-12 12:17:36] 2026-03-12 12:17:05,732 | INFO     | maximum number of monitored processes: 6
[2026-03-12 12:17:36] 2026-03-12 12:17:05,733 | INFO     | aborting job monitoring since job object (job id=7037260783) has expired
[2026-03-12 12:17:36] 2026-03-12 12:17:05,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 12:17:36] 2026-03-12 12:17:05,733 | INFO     | will abort loop
[2026-03-12 12:17:36] 2026-03-12 12:17:05,744 | INFO     | all payload control threads have been joined
[2026-03-12 12:17:36] 2026-03-12 12:17:05,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 12:17:36] 2026-03-12 12:17:05,823 | INFO     | [payload] validate_post thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,080 | INFO     | [job] queue monitor thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,301 | INFO     | [job] validate thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,412 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,465 | INFO     | [data] control thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,583 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,604 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,667 | INFO     | [job] control thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,738 | INFO     | [job] job monitor thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,749 | INFO     | [payload] control thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,838 | INFO     | [payload] failed_post thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:06,877 | INFO     | [data] copytool_out thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:07,021 | INFO     | [data] copytool_in thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:09,790 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 12:17:36] 2026-03-12 12:17:16,994 | INFO     | [monitor] cgroup control has ended
[2026-03-12 12:17:36] 2026-03-12 12:17:18,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494435837760)>', '<ExcThread(monitor, started 140493857998592)>']
[2026-03-12 12:17:36] 2026-03-12 12:17:23,962 | INFO     | all workflow threads have been joined
[2026-03-12 12:17:36] 2026-03-12 12:17:23,962 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 12:17:36] 2026-03-12 12:17:23,963 | INFO     | traces error code: 0
[2026-03-12 12:17:36] 2026-03-12 12:17:23,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 12:17:36] 2026-03-12 12:17:36,122 | INFO     | PID=3139007 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 12:17:36] 2026-03-12 12:17:36,123 | INFO     | .. there are 17 such processes running
[2026-03-12 12:17:36] 2026-03-12 12:17:36,124 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 12:17:36] 2026-03-12 12:17:36,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 12:17:36] 2026-03-12 12:17:36,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 12:17:36] 2026-03-12 12:17:36,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 12:17:36] 2026-03-12 12:17:36,124 | INFO     | [monitor] control thread has ended
[2026-03-12 12:17:36] 2026-03-12 12:17:36,328 [wrapper] ==== pilot stdout END ====
[2026-03-12 12:17:36] 2026-03-12 12:17:36,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 12:17:36] 2026-03-12 12:17:36,336 [wrapper] pilotpid: 3139007
[2026-03-12 12:17:36] 2026-03-12 12:17:36,340 [wrapper] Pilot exit status: 0
[2026-03-12 12:17:36] 2026-03-12 12:17:36,354 [wrapper] pandaids: 7037260783
[2026-03-12 12:17:36] 2026-03-12 12:17:36,538 [wrapper] cleanup supervisor_pilot 3375466 3139008
[2026-03-12 12:17:36] 2026-03-12 12:17:36,542 [wrapper] Test setup, not cleaning
[2026-03-12 12:17:36] 2026-03-12 12:17:36,546 [wrapper] apfmon messages muted
[2026-03-12 12:17:36] 2026-03-12 12:17:36,550 [wrapper] ==== wrapper stdout END ====
[2026-03-12 12:17:36] 2026-03-12 12:17:36,553 [wrapper] ==== wrapper stderr END ====
[2026-03-12 12:17:36]  *** Error codes and diagnostics ***
[2026-03-12 12:17:36]     "exeErrorCode": 0,
[2026-03-12 12:17:36]     "exeErrorDiag": "",
[2026-03-12 12:17:36]     "pilotErrorCode": 0,
[2026-03-12 12:17:36]     "pilotErrorDiag": "",
[2026-03-12 12:17:36]  *** Listing of results directory ***
[2026-03-12 12:17:36] total 440152
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc    584627 Mar  4 06:10 pilot3.tar.gz
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc      5111 Mar  4 06:10 queuedata.json
[2026-03-12 12:17:36] -rwx------ 1 boinc boinc     36322 Mar  4 06:10 runpilot2-wrapper.sh
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc       100 Mar 12 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 12:17:36] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 11:28 run_atlas
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc       105 Mar 12 11:28 job.xml
[2026-03-12 12:17:36] -rw-r--r-- 2 boinc boinc 262363133 Mar 12 11:28 EVNT.48564763._000008.pool.root.1
[2026-03-12 12:17:36] -rw-r--r-- 2 boinc boinc     15845 Mar 12 11:28 start_atlas.sh
[2026-03-12 12:17:36] drwxrwx--x 2 boinc boinc      4096 Mar 12 11:28 shared
[2026-03-12 12:17:36] -rw-r--r-- 2 boinc boinc    597953 Mar 12 11:28 input.tar.gz
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc      9415 Mar 12 11:28 init_data.xml
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc         0 Mar 12 11:28 boinc_setup_complete
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc         0 Mar 12 11:28 boinc_lockfile
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc      2557 Mar 12 11:28 pandaJob.out
[2026-03-12 12:17:36] -rw------- 1 boinc boinc   1006241 Mar 12 11:29 agis_schedconf.cvmfs.json
[2026-03-12 12:17:36] -rw------- 1 boinc boinc   1511578 Mar 12 11:29 agis_ddmendpoints.agis.ALL.json
[2026-03-12 12:17:36] -rw------- 1 boinc boinc       421 Mar 12 11:29 workernode_map.json
[2026-03-12 12:17:36] drwx------ 5 boinc boinc      4096 Mar 12 11:29 pilot3
[2026-03-12 12:17:36] -rw------- 1 boinc boinc 182846421 Mar 12 12:16 HITS.48937817._000183.pool.root.1
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc       529 Mar 12 12:16 boinc_task_state.xml
[2026-03-12 12:17:36] -rw------- 1 boinc boinc        95 Mar 12 12:16 pilot_heartbeat.json
[2026-03-12 12:17:36] -rw------- 1 boinc boinc      1025 Mar 12 12:16 memory_monitor_summary.json
[2026-03-12 12:17:36] -rw------- 1 boinc boinc    353501 Mar 12 12:16 log.48937817._000183.job.log.tgz.1
[2026-03-12 12:17:36] -rw------- 1 boinc boinc      6278 Mar 12 12:16 heartbeat.json
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc      8192 Mar 12 12:17 boinc_mmap_file
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc        27 Mar 12 12:17 wrapper_checkpoint.txt
[2026-03-12 12:17:36] -rw------- 1 boinc boinc       824 Mar 12 12:17 pilotlog.txt
[2026-03-12 12:17:36] -rw------- 1 boinc boinc    430799 Mar 12 12:17 log.48937817._000183.job.log.1
[2026-03-12 12:17:36] -rw------- 1 boinc boinc       357 Mar 12 12:17 output.list
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc       620 Mar 12 12:17 runtime_log
[2026-03-12 12:17:36] -rw------- 1 boinc boinc    798720 Mar 12 12:17 result.tar.gz
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc      8787 Mar 12 12:17 runtime_log.err
[2026-03-12 12:17:36] -rw------- 1 boinc boinc       643 Mar 12 12:17 KaJLDmncuH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYVJLDmjf0Kdn.diag
[2026-03-12 12:17:36] -rw-r--r-- 1 boinc boinc     21975 Mar 12 12:17 stderr.txt
[2026-03-12 12:17:36] HITS file was successfully produced:
[2026-03-12 12:17:36] -rw------- 1 boinc boinc 182846421 Mar 12 12:16 shared/HITS.pool.root.1
[2026-03-12 12:17:36]  *** Contents of shared directory: ***
[2026-03-12 12:17:36] total 436168
[2026-03-12 12:17:36] -rw-r--r-- 2 boinc boinc 262363133 Mar 12 11:28 ATLAS.root_0
[2026-03-12 12:17:36] -rw-r--r-- 2 boinc boinc     15845 Mar 12 11:28 start_atlas.sh
[2026-03-12 12:17:36] -rw-r--r-- 2 boinc boinc    597953 Mar 12 11:28 input.tar.gz
[2026-03-12 12:17:36] -rw------- 1 boinc boinc 182846421 Mar 12 12:16 HITS.pool.root.1
[2026-03-12 12:17:36] -rw------- 1 boinc boinc    798720 Mar 12 12:17 result.tar.gz
12:17:38 (3133946): run_atlas exited; CPU time 30261.076072
12:17:38 (3133946): called boinc_finish(0)

</stderr_txt>
]]>

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