Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:42 (3076297): wrapper (7.7.26015): starting
00:06:42 (3076297): wrapper: running run_atlas (--nthreads 3)
[2026-03-13 00:06:42] Arguments: --nthreads 3
[2026-03-13 00:06:42] Threads: 3
[2026-03-13 00:06:42] Checking for CVMFS
[2026-03-13 00:06:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 00:06:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 00:06:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 00:06:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 00:06:42] 2.9.2.0 34828 22141 89048 157217 1 50 26165326 36864000 0 130560 0 8577522 99.982 837722 13778 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 00:06:42] CVMFS is ok
[2026-03-13 00:06:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 00:06:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 00:06:42] Further information can be found at the LHC@home message board.
[2026-03-13 00:06:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 00:06:42] Checking for apptainer binary...
[2026-03-13 00:06:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 00:06:42] Running /usr/bin/apptainer --version
[2026-03-13 00:06:42] apptainer version 1.4.1-1.1
[2026-03-13 00:06:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 00:06:42] atlasA214
[2026-03-13 00:06:42] apptainer works
[2026-03-13 00:06:42] Set ATHENA_PROC_NUMBER=3
[2026-03-13 00:06:42] Set ATHENA_CORE_NUMBER=3
[2026-03-13 00:06:42] Starting ATLAS job with PandaID=7037242204
[2026-03-13 00:06:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 01:28:25]  *** The last 200 lines of the pilot log: ***
[2026-03-13 01:28:25] 2026-03-13 00:27:53,618 | INFO     | **************************************
[2026-03-13 01:28:25] 2026-03-13 00:27:53,618 | INFO     | 
[2026-03-13 01:28:25] 2026-03-13 00:27:53,619 | INFO     | architecture information:
[2026-03-13 01:28:25] 2026-03-13 00:27:53,619 | INFO     | executing command: cat /etc/os-release
[2026-03-13 01:28:25] 2026-03-13 00:27:53,627 | INFO     | cat /etc/os-release:
[2026-03-13 01:28:25] NAME="CentOS Linux"
[2026-03-13 01:28:25] VERSION="7 (Core)"
[2026-03-13 01:28:25] ID="centos"
[2026-03-13 01:28:25] ID_LIKE="rhel fedora"
[2026-03-13 01:28:25] VERSION_ID="7"
[2026-03-13 01:28:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 01:28:25] ANSI_COLOR="0;31"
[2026-03-13 01:28:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 01:28:25] HOME_URL="https://www.centos.org/"
[2026-03-13 01:28:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 01:28:25] 
[2026-03-13 01:28:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 01:28:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 01:28:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 01:28:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 01:28:25] 
[2026-03-13 01:28:25] 2026-03-13 00:27:53,628 | INFO     | **************************************
[2026-03-13 01:28:25] 2026-03-13 00:27:54,129 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 01:28:25] 2026-03-13 00:27:54,140 | INFO     | sufficient remaining disk space (232517533696 B)
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | INFO     | update_server=False
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 01:28:25] 2026-03-13 00:27:54,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 01:28:25] 2026-03-13 00:27:54,239 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 01:28:25] 2026-03-13 00:27:54,240 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 01:28:25] 2026-03-13 00:27:54,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:28:25] 2026-03-13 00:27:54,240 | INFO     | will abort loop
[2026-03-13 01:28:25] 2026-03-13 00:27:54,380 | INFO     | all payload control threads have been joined
[2026-03-13 01:28:25] 2026-03-13 00:27:54,762 | INFO     | all data control threads have been joined
[2026-03-13 01:28:25] 2026-03-13 00:27:55,146 | INFO     | [job] queue monitor thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,147 | INFO     | [job] retrieve thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,159 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,245 | INFO     | [job] job monitor thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,299 | INFO     | [data] copytool_in thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,357 | INFO     | all job control threads have been joined
[2026-03-13 01:28:25] 2026-03-13 00:27:55,386 | INFO     | [payload] control thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,427 | INFO     | [payload] validate_post thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,768 | INFO     | [data] control thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:55,850 | INFO     | [payload] failed_post thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:56,147 | INFO     | [data] copytool_out thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:56,363 | INFO     | [job] control thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:56,586 | INFO     | [job] validate thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:56,592 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:56,600 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:58,148 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:27:58,895 | INFO     | [monitor] cgroup control has ended
[2026-03-13 01:28:25] 2026-03-13 00:28:05,096 | INFO     | job.realtimelogging is not enabled
[2026-03-13 01:28:25] 2026-03-13 00:28:06,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 01:28:25] 2026-03-13 00:28:07,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544831506240)>', '<ExcThread(monitor, started 140544340649728)>']
[2026-03-13 01:28:25] 2026-03-13 00:28:12,817 | INFO     | all workflow threads have been joined
[2026-03-13 01:28:25] 2026-03-13 00:28:12,818 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 01:28:25] 2026-03-13 00:28:12,818 | INFO     | traces error code: 0
[2026-03-13 01:28:25] 2026-03-13 00:28:12,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 01:28:25] 2026-03-13 00:28:25,171 | INFO     | PID=3080335 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 01:28:25] 2026-03-13 00:28:25,171 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 01:28:25] 2026-03-13 00:28:25,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 01:28:25] 2026-03-13 00:28:25,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 01:28:25] 2026-03-13 00:28:25,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 01:28:25] 2026-03-13 00:28:25,171 | INFO     | [monitor] control thread has ended
[2026-03-13 01:28:25] 2026-03-13 00:28:25,218 [wrapper] ==== pilot stdout END ====
[2026-03-13 01:28:25] 2026-03-13 00:28:25,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 01:28:25] 2026-03-13 00:28:25,222 [wrapper] pilotpid: 3080335
[2026-03-13 01:28:25] 2026-03-13 00:28:25,224 [wrapper] Pilot exit status: 0
[2026-03-13 01:28:25] 2026-03-13 00:28:25,231 [wrapper] pandaids: 7037242204
[2026-03-13 01:28:25] 2026-03-13 00:28:25,246 [wrapper] cleanup supervisor_pilot 3089841 3080336
[2026-03-13 01:28:25] 2026-03-13 00:28:25,249 [wrapper] Test setup, not cleaning
[2026-03-13 01:28:25] 2026-03-13 00:28:25,251 [wrapper] apfmon messages muted
[2026-03-13 01:28:25] 2026-03-13 00:28:25,253 [wrapper] ==== wrapper stdout END ====
[2026-03-13 01:28:25] 2026-03-13 00:28:25,255 [wrapper] ==== wrapper stderr END ====
[2026-03-13 01:28:25]  *** Error codes and diagnostics ***
[2026-03-13 01:28:25]     "exeErrorCode": 0,
[2026-03-13 01:28:25]     "exeErrorDiag": "",
[2026-03-13 01:28:25]     "pilotErrorCode": 0,
[2026-03-13 01:28:25]     "pilotErrorDiag": "",
[2026-03-13 01:28:25]  *** Listing of results directory ***
[2026-03-13 01:28:25] total 438648
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc    584627 Mar  4 05:50 pilot3.tar.gz
[2026-03-13 01:28:25] -rwx------ 1 boinc boinc     36322 Mar  4 05:51 runpilot2-wrapper.sh
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc      5111 Mar  4 05:52 queuedata.json
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc       100 Mar 13 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 01:28:25] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 00:06 run_atlas
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc       105 Mar 13 00:06 job.xml
[2026-03-13 01:28:25] -rw-r--r-- 2 boinc boinc 260158839 Mar 13 00:06 EVNT.48564744._000005.pool.root.1
[2026-03-13 01:28:25] -rw-r--r-- 2 boinc boinc    597940 Mar 13 00:06 input.tar.gz
[2026-03-13 01:28:25] -rw-r--r-- 2 boinc boinc     15845 Mar 13 00:06 start_atlas.sh
[2026-03-13 01:28:25] drwxrwx--x 2 boinc boinc      4096 Mar 13 00:06 shared
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc         0 Mar 13 00:06 boinc_setup_complete
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc      6441 Mar 13 00:06 init_data.xml
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc         0 Mar 13 00:06 boinc_lockfile
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc      2538 Mar 13 00:06 pandaJob.out
[2026-03-13 01:28:25] -rw------- 1 boinc boinc   1006498 Mar 13 00:06 agis_schedconf.cvmfs.json
[2026-03-13 01:28:25] -rw------- 1 boinc boinc   1511578 Mar 13 00:06 agis_ddmendpoints.agis.ALL.json
[2026-03-13 01:28:25] -rw------- 1 boinc boinc       430 Mar 13 00:06 workernode_map.json
[2026-03-13 01:28:25] drwx------ 5 boinc boinc      4096 Mar 13 00:06 pilot3
[2026-03-13 01:28:25] -rw------- 1 boinc boinc 183139555 Mar 13 01:27 HITS.48937803._000123.pool.root.1
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc       529 Mar 13 01:27 boinc_task_state.xml
[2026-03-13 01:28:25] -rw------- 1 boinc boinc      1019 Mar 13 01:27 memory_monitor_summary.json
[2026-03-13 01:28:25] -rw------- 1 boinc boinc    264501 Mar 13 01:27 log.48937803._000123.job.log.tgz.1
[2026-03-13 01:28:25] -rw------- 1 boinc boinc      6314 Mar 13 01:27 heartbeat.json
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc        27 Mar 13 01:28 wrapper_checkpoint.txt
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc      8192 Mar 13 01:28 boinc_mmap_file
[2026-03-13 01:28:25] -rw------- 1 boinc boinc       747 Mar 13 01:28 pilotlog.txt
[2026-03-13 01:28:25] -rw------- 1 boinc boinc        95 Mar 13 01:28 pilot_heartbeat.json
[2026-03-13 01:28:25] -rw------- 1 boinc boinc    713416 Mar 13 01:28 log.48937803._000123.job.log.1
[2026-03-13 01:28:25] -rw------- 1 boinc boinc       357 Mar 13 01:28 output.list
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc       620 Mar 13 01:28 runtime_log
[2026-03-13 01:28:25] -rw------- 1 boinc boinc    993280 Mar 13 01:28 result.tar.gz
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc      8911 Mar 13 01:28 runtime_log.err
[2026-03-13 01:28:25] -rw------- 1 boinc boinc       660 Mar 13 01:28 PJCLDmmNtH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmUSHLDmKrlC3n.diag
[2026-03-13 01:28:25] -rw-r--r-- 1 boinc boinc      9454 Mar 13 01:28 stderr.txt
[2026-03-13 01:28:25] HITS file was successfully produced:
[2026-03-13 01:28:25] -rw------- 1 boinc boinc 183139555 Mar 13 01:27 shared/HITS.pool.root.1
[2026-03-13 01:28:25]  *** Contents of shared directory: ***
[2026-03-13 01:28:25] total 434492
[2026-03-13 01:28:25] -rw-r--r-- 2 boinc boinc 260158839 Mar 13 00:06 ATLAS.root_0
[2026-03-13 01:28:25] -rw-r--r-- 2 boinc boinc    597940 Mar 13 00:06 input.tar.gz
[2026-03-13 01:28:25] -rw-r--r-- 2 boinc boinc     15845 Mar 13 00:06 start_atlas.sh
[2026-03-13 01:28:25] -rw------- 1 boinc boinc 183139555 Mar 13 01:27 HITS.pool.root.1
[2026-03-13 01:28:25] -rw------- 1 boinc boinc    993280 Mar 13 01:28 result.tar.gz
01:28:26 (3076297): run_atlas exited; CPU time 13909.783316
01:28:26 (3076297): called boinc_finish(0)

</stderr_txt>
]]>

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