Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:55:20 (2259): wrapper (7.7.26015): starting
05:55:20 (2259): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 05:55:20] Arguments: --nthreads 12
[2026-03-12 05:55:20] Threads: 12
[2026-03-12 05:55:20] Checking for CVMFS
[2026-03-12 05:55:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 05:55:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 05:55:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 05:55:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 05:55:21] 2.11.2.0 2937 440169 97432 157195 1 50 12855628 20275201 1 130560 1 191192423 99.956 25499358 17787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 05:55:21] CVMFS is ok
[2026-03-12 05:55:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 05:55:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 05:55:21] Further information can be found at the LHC@home message board.
[2026-03-12 05:55:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 05:55:21] Checking for apptainer binary...
[2026-03-12 05:55:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 05:55:21] Running /usr/bin/apptainer --version
[2026-03-12 05:55:21] apptainer version 1.3.2-1.el7
[2026-03-12 05:55:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 05:55:22] c-205-8.aglt2.org
[2026-03-12 05:55:22] apptainer works
[2026-03-12 05:55:22] Set ATHENA_PROC_NUMBER=12
[2026-03-12 05:55:22] Set ATHENA_CORE_NUMBER=12
[2026-03-12 05:55:22] Starting ATLAS job with PandaID=7037167078
[2026-03-12 05:55:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 06:58:54]  *** The last 200 lines of the pilot log: ***
[2026-03-12 06:58:54]  ddmendpoint_alt=None
[2026-03-12 06:58:54]  direct_access_lan=False
[2026-03-12 06:58:54]  direct_access_wan=False
[2026-03-12 06:58:54]  domain=
[2026-03-12 06:58:54]  filesize=378131
[2026-03-12 06:58:54]  filetype=log
[2026-03-12 06:58:54]  guid=1372854d-55f9-4767-b61d-7a43fc0449af
[2026-03-12 06:58:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 06:58:54]  is_altstaged=None
[2026-03-12 06:58:54]  is_tar=False
[2026-03-12 06:58:54]  lfn=log.48936087._000192.job.log.tgz.1
[2026-03-12 06:58:54]  mtime=0
[2026-03-12 06:58:54]  protocol_id=None
[2026-03-12 06:58:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 06:58:54]  replicas=None
[2026-03-12 06:58:54]  scope=mc23_13p6TeV
[2026-03-12 06:58:54]  status=None
[2026-03-12 06:58:54]  status_code=0
[2026-03-12 06:58:54]  storage_token=
[2026-03-12 06:58:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7037167078/log.48936087._000192.job.log.tgz.1
[2026-03-12 06:58:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/90/log.48936087._000192.job.log.tgz.1
[2026-03-12 06:58:54]  workdir=None
[2026-03-12 06:58:54] ]
[2026-03-12 06:58:54] 2026-03-12 10:57:59,620 | INFO     | transferring file log.48936087._000192.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7037167078/log.48936087._000192.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-12 06:58:54] 2026-03-12 10:57:59,620 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7037167078/log.48936087._000192.job.log.tgz.1 /tmp/boinchome/slots/0/log.48936087._000192.job
[2026-03-12 06:58:54] 2026-03-12 10:57:59,641 | INFO     | adding to output.list: log.48936087._000192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/90/log.48936087._000192.job.log.tg
[2026-03-12 06:58:54] 2026-03-12 10:57:59,642 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 06:58:54] 2026-03-12 10:57:59,642 | INFO     | summary of transferred files:
[2026-03-12 06:58:54] 2026-03-12 10:57:59,642 | INFO     |  -- lfn=log.48936087._000192.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 06:58:54] 2026-03-12 10:57:59,643 | INFO     | stage-out finished correctly
[2026-03-12 06:58:54] 2026-03-12 10:57:59,725 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 06:58:54] 2026-03-12 10:57:59,804 | INFO     | job 7037167078 has state=finished
[2026-03-12 06:58:54] 2026-03-12 10:57:59,804 | INFO     | preparing for final server update for job 7037167078 in state='finished'
[2026-03-12 06:58:54] 2026-03-12 10:57:59,805 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037167078/jobReport.json
[2026-03-12 06:58:54] 2026-03-12 10:57:59,808 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 06:58:54] 2026-03-12 10:57:59,808 | INFO     | this job has now completed (state=finished)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,808 | INFO     | log transfer has been attempted: DONE
[2026-03-12 06:58:54] 2026-03-12 10:57:59,809 | INFO     | job 7037167078 has finished - writing final server update
[2026-03-12 06:58:54] 2026-03-12 10:57:59,809 | INFO     | total number of processed events: 400 (read)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,810 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037167078/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,811 | INFO     | extracted standard info from prmon json
[2026-03-12 06:58:54] 2026-03-12 10:57:59,811 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 06:58:54] 2026-03-12 10:57:59,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 06:58:54] 2026-03-12 10:57:59,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 06:58:54] 2026-03-12 10:57:59,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 06:58:54] 2026-03-12 10:57:59,813 | INFO     | fitting pss+swap vs Time
[2026-03-12 06:58:54] 2026-03-12 10:57:59,813 | INFO     | sum of square deviations: 48810217.5
[2026-03-12 06:58:54] 2026-03-12 10:57:59,813 | INFO     | sum of deviations: -5217641282.999999
[2026-03-12 06:58:54] 2026-03-12 10:57:59,813 | INFO     | mean x: 1773311288.5
[2026-03-12 06:58:54] 2026-03-12 10:57:59,813 | INFO     | mean y: 2809231.6296296297
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | intersect: 189563574587.521
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | chi2: 0.04493473788002948
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | current memory leak: -106.90 B/s (using 54 data points, chi2=0.04)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | could have reported an average CPU frequency of 1651 MHz (6 samples)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | ..............................
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | . Timing measurements:
[2026-03-12 06:58:54] 2026-03-12 10:57:59,814 | INFO     | . get job = 0 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | . initial setup = 7 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | . payload setup = 7 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | . stage-in = 0 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | . payload execution = 3713 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | . stage-out = 0 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | . log creation = 0 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,815 | INFO     | ..............................
[2026-03-12 06:58:54] 2026-03-12 10:57:59,982 | INFO     | 
[2026-03-12 06:58:54] 2026-03-12 10:57:59,982 | INFO     | job summary report
[2026-03-12 06:58:54] 2026-03-12 10:57:59,982 | INFO     | --------------------------------------------------
[2026-03-12 06:58:54] 2026-03-12 10:57:59,983 | INFO     | PanDA job id: 7037167078
[2026-03-12 06:58:54] 2026-03-12 10:57:59,983 | INFO     | task id: 48936087
[2026-03-12 06:58:54] 2026-03-12 10:57:59,983 | INFO     | errors: (none)
[2026-03-12 06:58:54] 2026-03-12 10:57:59,983 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 06:58:54] 2026-03-12 10:57:59,983 | INFO     | pilot state: finished 
[2026-03-12 06:58:54] 2026-03-12 10:57:59,983 | INFO     | transexitcode: 0
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | exeerrorcode: 0
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | exeerrordiag: 
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | exitcode: 0
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | exitmsg: OK
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | cpuconsumptiontime: 40516 s
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | nevents: 400
[2026-03-12 06:58:54] 2026-03-12 10:57:59,984 | INFO     | neventsw: 0
[2026-03-12 06:58:54] 2026-03-12 10:57:59,985 | INFO     | pid: 10398
[2026-03-12 06:58:54] 2026-03-12 10:57:59,985 | INFO     | pgrp: 10398
[2026-03-12 06:58:54] 2026-03-12 10:57:59,985 | INFO     | corecount: 12
[2026-03-12 06:58:54] 2026-03-12 10:57:59,985 | INFO     | event service: False
[2026-03-12 06:58:54] 2026-03-12 10:57:59,985 | INFO     | sizes: {0: 2280008, 1: 2280242, 11: 2280242, 3725: 2305963, 3726: 2315155}
[2026-03-12 06:58:54] 2026-03-12 10:57:59,985 | INFO     | --------------------------------------------------
[2026-03-12 06:58:54] 2026-03-12 10:57:59,986 | INFO     | 
[2026-03-12 06:58:54] 2026-03-12 10:57:59,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 06:58:54] 2026-03-12 10:58:00,010 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,011 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,011 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,011 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,013 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 06:58:54] 2026-03-12 10:58:00,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,014 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 06:58:54] 2026-03-12 10:58:00,014 | INFO     | job 7037167078 has completed (purged errors)
[2026-03-12 06:58:54] 2026-03-12 10:58:00,014 | INFO     | overall cleanup function is called
[2026-03-12 06:58:54] 2026-03-12 10:58:01,018 | INFO     | --- collectZombieJob: --- 10, [10398]
[2026-03-12 06:58:54] 2026-03-12 10:58:01,018 | INFO     | zombie collector waiting for pid 10398
[2026-03-12 06:58:54] 2026-03-12 10:58:01,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 06:58:54] 2026-03-12 10:58:01,019 | INFO     | collected zombie processes
[2026-03-12 06:58:54] 2026-03-12 10:58:01,019 | INFO     | will attempt to kill all subprocesses of pid=10398
[2026-03-12 06:58:54] 2026-03-12 10:58:01,106 | INFO     | process IDs to be killed: [10398] (in reverse order)
[2026-03-12 06:58:54] 2026-03-12 10:58:01,157 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 06:58:54] 2026-03-12 10:58:01,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 06:58:54] 2026-03-12 10:58:01,160 | INFO     | did not find any defunct processes belonging to 10398
[2026-03-12 06:58:54] 2026-03-12 10:58:01,162 | INFO     | did not find any defunct processes belonging to 10398
[2026-03-12 06:58:54] 2026-03-12 10:58:01,162 | INFO     | ready for new job
[2026-03-12 06:58:54] 2026-03-12 10:58:01,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 06:58:54] 2026-03-12 10:58:01,163 | INFO     | **************************************
[2026-03-12 06:58:54] 2026-03-12 10:58:01,163 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 06:58:54] 2026-03-12 10:58:01,163 | INFO     | **************************************
[2026-03-12 06:58:54] 2026-03-12 10:58:01,164 | INFO     | 
[2026-03-12 06:58:54] 2026-03-12 10:58:01,164 | INFO     | architecture information:
[2026-03-12 06:58:54] 2026-03-12 10:58:01,164 | INFO     | executing command: cat /etc/os-release
[2026-03-12 06:58:54] 2026-03-12 10:58:01,179 | INFO     | cat /etc/os-release:
[2026-03-12 06:58:54] NAME="CentOS Linux"
[2026-03-12 06:58:54] VERSION="7 (Core)"
[2026-03-12 06:58:54] ID="centos"
[2026-03-12 06:58:54] ID_LIKE="rhel fedora"
[2026-03-12 06:58:54] VERSION_ID="7"
[2026-03-12 06:58:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 06:58:54] ANSI_COLOR="0;31"
[2026-03-12 06:58:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 06:58:54] HOME_URL="https://www.centos.org/"
[2026-03-12 06:58:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 06:58:54] 
[2026-03-12 06:58:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 06:58:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 06:58:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 06:58:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 06:58:54] 
[2026-03-12 06:58:54] 2026-03-12 10:58:01,179 | INFO     | **************************************
[2026-03-12 06:58:54] 2026-03-12 10:58:01,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 06:58:54] 2026-03-12 10:58:01,698 | INFO     | sufficient remaining disk space (29257367552 B)
[2026-03-12 06:58:54] 2026-03-12 10:58:01,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 06:58:54] 2026-03-12 10:58:01,698 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 06:58:54] 2026-03-12 10:58:01,698 | INFO     | update_server=False
[2026-03-12 06:58:54] 2026-03-12 10:58:01,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 06:58:54] 2026-03-12 10:58:01,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 06:58:54] 2026-03-12 10:58:01,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 06:58:54] 2026-03-12 10:58:01,830 | INFO     | all job control threads have been joined
[2026-03-12 06:58:54] 2026-03-12 10:58:02,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 06:58:54] 2026-03-12 10:58:02,017 | INFO     | aborting loop
[2026-03-12 06:58:54] 2026-03-12 10:58:02,175 | INFO     | all data control threads have been joined
[2026-03-12 06:58:54] 2026-03-12 10:58:02,704 | INFO     | [job] retrieve thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:02,704 | INFO     | [job] queue monitor thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:02,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 06:58:54] 2026-03-12 10:58:02,770 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:02,836 | INFO     | [job] control thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:02,909 | INFO     | [job] validate thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:02,956 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:03,020 | INFO     | [job] job monitor thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:03,067 | INFO     | [payload] validate_post thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:03,078 | INFO     | all payload control threads have been joined
[2026-03-12 06:58:54] 2026-03-12 10:58:03,180 | INFO     | [data] control thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:03,423 | INFO     | [data] copytool_in thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:03,429 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:04,084 | INFO     | [payload] control thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:04,089 | INFO     | [payload] failed_post thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:04,736 | INFO     | [data] copytool_out thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:05,703 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:12,480 | INFO     | job.realtimelogging is not enabled
[2026-03-12 06:58:54] 2026-03-12 10:58:13,485 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 06:58:54] 2026-03-12 10:58:32,551 | INFO     | PID=6014 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 06:58:54] 2026-03-12 10:58:32,551 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 06:58:54] 2026-03-12 10:58:32,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 06:58:54] 2026-03-12 10:58:32,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 06:58:54] 2026-03-12 10:58:48,333 | INFO     | [monitor] cgroup control has ended
[2026-03-12 06:58:54] 2026-03-12 10:58:49,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661859047232)>', '<ExcThread(monitor, started 140660883568384)>']
[2026-03-12 06:58:54] 2026-03-12 10:58:50,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 06:58:54] 2026-03-12 10:58:50,635 | INFO     | [monitor] control thread has ended
[2026-03-12 06:58:54] 2026-03-12 10:58:54,665 | INFO     | all workflow threads have been joined
[2026-03-12 06:58:54] 2026-03-12 10:58:54,665 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 06:58:54] 2026-03-12 10:58:54,665 | INFO     | traces error code: 0
[2026-03-12 06:58:54] 2026-03-12 10:58:54,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 06:58:54] 2026-03-12 10:58:54,751 [wrapper] ==== pilot stdout END ====
[2026-03-12 06:58:54] 2026-03-12 10:58:54,755 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 06:58:54] 2026-03-12 10:58:54,759 [wrapper] pilotpid: 6014
[2026-03-12 06:58:54] 2026-03-12 10:58:54,763 [wrapper] Pilot exit status: 0
[2026-03-12 06:58:54] 2026-03-12 10:58:54,778 [wrapper] pandaids: 7037167078
[2026-03-12 06:58:54] 2026-03-12 10:58:54,824 [wrapper] cleanup supervisor_pilot 28900 6015
[2026-03-12 06:58:54] 2026-03-12 10:58:54,828 [wrapper] Test setup, not cleaning
[2026-03-12 06:58:54] 2026-03-12 10:58:54,833 [wrapper] apfmon messages muted
[2026-03-12 06:58:54] 2026-03-12 10:58:54,837 [wrapper] ==== wrapper stdout END ====
[2026-03-12 06:58:54] 2026-03-12 10:58:54,841 [wrapper] ==== wrapper stderr END ====
[2026-03-12 06:58:54]  *** Error codes and diagnostics ***
[2026-03-12 06:58:54]     "exeErrorCode": 0,
[2026-03-12 06:58:54]     "exeErrorDiag": "",
[2026-03-12 06:58:54]     "pilotErrorCode": 0,
[2026-03-12 06:58:54]     "pilotErrorDiag": "",
[2026-03-12 06:58:54]  *** Listing of results directory ***
[2026-03-12 06:58:54] total 439440
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 22:50 pilot3.tar.gz
[2026-03-12 06:58:54] -rwx------ 1 boincer umatlas     36322 Mar  3 22:52 runpilot2-wrapper.sh
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 22:55 queuedata.json
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas       100 Mar 12 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 06:58:54] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 05:55 run_atlas
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas       105 Mar 12 05:55 job.xml
[2026-03-12 06:58:54] -rw-r--r-- 2 boincer umatlas 263666050 Mar 12 05:55 EVNT.48564634._000026.pool.root.1
[2026-03-12 06:58:54] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 05:55 start_atlas.sh
[2026-03-12 06:58:54] drwxrwx--x 2 boincer umatlas      4096 Mar 12 05:55 shared
[2026-03-12 06:58:54] -rw-r--r-- 2 boincer umatlas    597948 Mar 12 05:55 input.tar.gz
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas         0 Mar 12 05:55 boinc_lockfile
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas      2553 Mar 12 05:55 pandaJob.out
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas        57 Mar 12 05:55 setup.sh.local
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas   1006243 Mar 12 05:55 agis_schedconf.cvmfs.json
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas   1511578 Mar 12 05:55 agis_ddmendpoints.agis.ALL.json
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas       444 Mar 12 05:55 workernode_map.json
[2026-03-12 06:58:54] drwx------ 5 boincer umatlas      4096 Mar 12 05:55 pilot3
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas      5952 Mar 12 06:55 init_data.xml
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas 180512521 Mar 12 06:57 HITS.48936087._000192.pool.root.1
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas       529 Mar 12 06:57 boinc_task_state.xml
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas      1044 Mar 12 06:57 memory_monitor_summary.json
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas    378131 Mar 12 06:57 log.48936087._000192.job.log.tgz.1
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas      6404 Mar 12 06:57 heartbeat.json
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas        27 Mar 12 06:58 wrapper_checkpoint.txt
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 06:58 boinc_mmap_file
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas        95 Mar 12 06:58 pilot_heartbeat.json
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas      4813 Mar 12 06:58 pilotlog.txt
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas    554411 Mar 12 06:58 log.48936087._000192.job.log.1
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas       357 Mar 12 06:58 output.list
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas       620 Mar 12 06:58 runtime_log
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas    952320 Mar 12 06:58 result.tar.gz
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas       658 Mar 12 06:58 w7QLDmJTsH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgNHLDmv6sFYn.diag
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas      9338 Mar 12 06:58 runtime_log.err
[2026-03-12 06:58:54] -rw-r--r-- 1 boincer umatlas     20835 Mar 12 06:58 stderr.txt
[2026-03-12 06:58:54] HITS file was successfully produced:
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas 180512521 Mar 12 06:57 shared/HITS.pool.root.1
[2026-03-12 06:58:54]  *** Contents of shared directory: ***
[2026-03-12 06:58:54] total 435308
[2026-03-12 06:58:54] -rw-r--r-- 2 boincer umatlas 263666050 Mar 12 05:55 ATLAS.root_0
[2026-03-12 06:58:54] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 05:55 start_atlas.sh
[2026-03-12 06:58:54] -rw-r--r-- 2 boincer umatlas    597948 Mar 12 05:55 input.tar.gz
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas 180512521 Mar 12 06:57 HITS.pool.root.1
[2026-03-12 06:58:54] -rw------- 1 boincer umatlas    952320 Mar 12 06:58 result.tar.gz
06:58:56 (2259): run_atlas exited; CPU time 40494.887676
06:58:56 (2259): called boinc_finish(0)

</stderr_txt>
]]>

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