Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:51 (4089027): wrapper (7.7.26015): starting
06:42:51 (4089027): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 06:42:51] Arguments: --nthreads 8
[2026-03-12 06:42:51] Threads: 8
[2026-03-12 06:42:51] Checking for CVMFS
[2026-03-12 06:42:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 06:42:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 06:42:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 06:42:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 06:42:53] 2.13.3.0 11820 112050 236336 157197 0 328 23544064 40960001 27334 16776704 0 356428133 99.637 347520604 36219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 06:42:53] CVMFS is ok
[2026-03-12 06:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 06:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 06:42:53] Further information can be found at the LHC@home message board.
[2026-03-12 06:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:42:53] Checking for apptainer binary...
[2026-03-12 06:42:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 06:42:53] Running /usr/bin/apptainer --version
[2026-03-12 06:42:53] apptainer version 1.4.5-2.el9
[2026-03-12 06:42:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:42:53] c-212-10.aglt2.org
[2026-03-12 06:42:53] apptainer works
[2026-03-12 06:42:54] Set ATHENA_PROC_NUMBER=8
[2026-03-12 06:42:54] Set ATHENA_CORE_NUMBER=8
[2026-03-12 06:42:54] Starting ATLAS job with PandaID=7037229421
[2026-03-12 06:42:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 11:47:34]  *** The last 200 lines of the pilot log: ***
[2026-03-12 11:47:34] 2026-03-12 15:46:37,887 | INFO     | job 7037229421 has finished - writing final server update
[2026-03-12 11:47:34] 2026-03-12 15:46:37,887 | INFO     | total number of processed events: 400 (read)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,910 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7037229421/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,911 | INFO     | extracted standard info from prmon json
[2026-03-12 11:47:34] 2026-03-12 15:46:37,912 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 11:47:34] 2026-03-12 15:46:37,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 11:47:34] 2026-03-12 15:46:37,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 11:47:34] 2026-03-12 15:46:37,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 11:47:34] 2026-03-12 15:46:37,916 | INFO     | fitting pss+swap vs Time
[2026-03-12 11:47:34] 2026-03-12 15:46:37,917 | INFO     | sum of square deviations: 8205822281.84228
[2026-03-12 11:47:34] 2026-03-12 15:46:37,919 | INFO     | sum of deviations: 2571810684.557045
[2026-03-12 11:47:34] 2026-03-12 15:46:37,919 | INFO     | mean x: 1773321330.54698
[2026-03-12 11:47:34] 2026-03-12 15:46:37,919 | INFO     | mean y: 2511505.174496644
[2026-03-12 11:47:34] 2026-03-12 15:46:37,919 | INFO     | intersect: -553270302.9625584
[2026-03-12 11:47:34] 2026-03-12 15:46:37,920 | INFO     | chi2: 2.188690004955598
[2026-03-12 11:47:34] 2026-03-12 15:46:37,920 | INFO     | sum of square deviations: 7799651920.423182
[2026-03-12 11:47:34] 2026-03-12 15:46:37,922 | INFO     | sum of deviations: 21195253803.348125
[2026-03-12 11:47:34] 2026-03-12 15:46:37,922 | INFO     | mean x: 1773321178.0443685
[2026-03-12 11:47:34] 2026-03-12 15:46:37,922 | INFO     | mean y: 2518401.6655290104
[2026-03-12 11:47:34] 2026-03-12 15:46:37,922 | INFO     | intersect: -4816413625.940056
[2026-03-12 11:47:34] 2026-03-12 15:46:37,922 | INFO     | chi2: 1.5002417688921552
[2026-03-12 11:47:34] 2026-03-12 15:46:37,923 | INFO     | current chi2=1.5002417688921552 (change=31.454807876157375 %)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,923 | INFO     | sum of square deviations: 7407127595.413197
[2026-03-12 11:47:34] 2026-03-12 15:46:37,925 | INFO     | sum of deviations: 20717818059.923615
[2026-03-12 11:47:34] 2026-03-12 15:46:37,925 | INFO     | mean x: 1773321025.5451388
[2026-03-12 11:47:34] 2026-03-12 15:46:37,925 | INFO     | mean y: 2518216.159722222
[2026-03-12 11:47:34] 2026-03-12 15:46:37,925 | INFO     | intersect: -4957480365.724013
[2026-03-12 11:47:34] 2026-03-12 15:46:37,925 | INFO     | chi2: 1.5006415181544384
[2026-03-12 11:47:34] 2026-03-12 15:46:37,925 | INFO     | current chi2=1.5006415181544384 (change=-0.026645656091706934 %)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,926 | INFO     | right removable region: 287
[2026-03-12 11:47:34] 2026-03-12 15:46:37,926 | INFO     | sum of square deviations: 7799661559.331065
[2026-03-12 11:47:34] 2026-03-12 15:46:37,928 | INFO     | sum of deviations: -40127669582.95904
[2026-03-12 11:47:34] 2026-03-12 15:46:37,928 | INFO     | mean x: 1773321483.0477815
[2026-03-12 11:47:34] 2026-03-12 15:46:37,928 | INFO     | mean y: 2527399.1399317407
[2026-03-12 11:47:34] 2026-03-12 15:46:37,928 | INFO     | intersect: 9125905124.54565
[2026-03-12 11:47:34] 2026-03-12 15:46:37,928 | INFO     | chi2: 0.7801899012464485
[2026-03-12 11:47:34] 2026-03-12 15:46:37,929 | INFO     | current chi2=0.7801899012464485 (change=64.35356768295397 %)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,929 | INFO     | sum of square deviations: 7407128999.319452
[2026-03-12 11:47:34] 2026-03-12 15:46:37,931 | INFO     | sum of deviations: -35242359062.37506
[2026-03-12 11:47:34] 2026-03-12 15:46:37,931 | INFO     | mean x: 1773321635.5486112
[2026-03-12 11:47:34] 2026-03-12 15:46:37,931 | INFO     | mean y: 2525496.3125
[2026-03-12 11:47:34] 2026-03-12 15:46:37,931 | INFO     | intersect: 8439807717.106053
[2026-03-12 11:47:34] 2026-03-12 15:46:37,931 | INFO     | chi2: 0.7750096413858882
[2026-03-12 11:47:34] 2026-03-12 15:46:37,931 | INFO     | current chi2=0.7750096413858882 (change=0.6639742263113324 %)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,932 | INFO     | left removable region: 20
[2026-03-12 11:47:34] 2026-03-12 15:46:37,932 | INFO     | sum of square deviations: 5902081975.460659
[2026-03-12 11:47:34] 2026-03-12 15:46:37,934 | INFO     | sum of deviations: -2987049703.910119
[2026-03-12 11:47:34] 2026-03-12 15:46:37,934 | INFO     | mean x: 1773321605.0449438
[2026-03-12 11:47:34] 2026-03-12 15:46:37,934 | INFO     | mean y: 2527001.6591760297
[2026-03-12 11:47:34] 2026-03-12 15:46:37,934 | INFO     | intersect: 900006873.5603933
[2026-03-12 11:47:34] 2026-03-12 15:46:37,934 | INFO     | chi2: 0.03893383819629332
[2026-03-12 11:47:34] 2026-03-12 15:46:37,934 | INFO     | current memory leak: -0.51 B/s (using 267 data points, chi2=0.04)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | could have reported an average CPU frequency of 3255 MHz (14 samples)
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | ..............................
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . Timing measurements:
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . get job = 0 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . initial setup = 21 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . payload setup = 21 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . stage-in = 0 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . payload execution = 18131 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . stage-out = 2 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | . log creation = 0 s
[2026-03-12 11:47:34] 2026-03-12 15:46:37,935 | INFO     | ..............................
[2026-03-12 11:47:34] 2026-03-12 15:46:38,105 | INFO     | 
[2026-03-12 11:47:34] 2026-03-12 15:46:38,105 | INFO     | job summary report
[2026-03-12 11:47:34] 2026-03-12 15:46:38,105 | INFO     | --------------------------------------------------
[2026-03-12 11:47:34] 2026-03-12 15:46:38,105 | INFO     | PanDA job id: 7037229421
[2026-03-12 11:47:34] 2026-03-12 15:46:38,105 | INFO     | task id: 48937842
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | errors: (none)
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | pilot state: finished 
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | transexitcode: 0
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | exeerrorcode: 0
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | exeerrordiag: 
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | exitcode: 0
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | exitmsg: OK
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | cpuconsumptiontime: 28243 s
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | nevents: 400
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | neventsw: 0
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | pid: 4099478
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | pgrp: 4099478
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | corecount: 8
[2026-03-12 11:47:34] 2026-03-12 15:46:38,106 | INFO     | event service: False
[2026-03-12 11:47:34] 2026-03-12 15:46:38,107 | INFO     | sizes: {0: 2280147, 1: 2280235, 18156: 2312528, 18160: 2321720}
[2026-03-12 11:47:34] 2026-03-12 15:46:38,107 | INFO     | --------------------------------------------------
[2026-03-12 11:47:34] 2026-03-12 15:46:38,107 | INFO     | 
[2026-03-12 11:47:34] 2026-03-12 15:46:38,107 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 11:47:34] 2026-03-12 15:46:38,273 | INFO     | job 7037229421 has completed (purged errors)
[2026-03-12 11:47:34] 2026-03-12 15:46:38,274 | INFO     | overall cleanup function is called
[2026-03-12 11:47:34] 2026-03-12 15:46:39,283 | INFO     | --- collectZombieJob: --- 10, [4099478]
[2026-03-12 11:47:34] 2026-03-12 15:46:39,283 | INFO     | zombie collector waiting for pid 4099478
[2026-03-12 11:47:34] 2026-03-12 15:46:39,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 11:47:34] 2026-03-12 15:46:39,284 | INFO     | collected zombie processes
[2026-03-12 11:47:34] 2026-03-12 15:46:39,284 | INFO     | will attempt to kill all subprocesses of pid=4099478
[2026-03-12 11:47:34] 2026-03-12 15:46:39,793 | INFO     | process IDs to be killed: [4099478] (in reverse order)
[2026-03-12 11:47:34] 2026-03-12 15:46:39,969 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 11:47:34] 2026-03-12 15:46:39,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 11:47:34] 2026-03-12 15:46:40,084 | INFO     | did not find any defunct processes belonging to 4099478
[2026-03-12 11:47:34] 2026-03-12 15:46:40,105 | INFO     | did not find any defunct processes belonging to 4099478
[2026-03-12 11:47:34] 2026-03-12 15:46:40,105 | INFO     | ready for new job
[2026-03-12 11:47:34] 2026-03-12 15:46:40,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 11:47:34] 2026-03-12 15:46:40,107 | INFO     | **************************************
[2026-03-12 11:47:34] 2026-03-12 15:46:40,107 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 11:47:34] 2026-03-12 15:46:40,108 | INFO     | **************************************
[2026-03-12 11:47:34] 2026-03-12 15:46:40,108 | INFO     | 
[2026-03-12 11:47:34] 2026-03-12 15:46:40,113 | INFO     | architecture information:
[2026-03-12 11:47:34] 2026-03-12 15:46:40,113 | INFO     | executing command: cat /etc/os-release
[2026-03-12 11:47:34] 2026-03-12 15:46:40,195 | INFO     | cat /etc/os-release:
[2026-03-12 11:47:34] NAME="CentOS Linux"
[2026-03-12 11:47:34] VERSION="7 (Core)"
[2026-03-12 11:47:34] ID="centos"
[2026-03-12 11:47:34] ID_LIKE="rhel fedora"
[2026-03-12 11:47:34] VERSION_ID="7"
[2026-03-12 11:47:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 11:47:34] ANSI_COLOR="0;31"
[2026-03-12 11:47:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 11:47:34] HOME_URL="https://www.centos.org/"
[2026-03-12 11:47:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 11:47:34] 
[2026-03-12 11:47:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 11:47:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 11:47:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 11:47:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 11:47:34] 
[2026-03-12 11:47:34] 2026-03-12 15:46:40,196 | INFO     | **************************************
[2026-03-12 11:47:34] 2026-03-12 15:46:40,699 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 11:47:34] 2026-03-12 15:46:40,725 | INFO     | sufficient remaining disk space (126353408000 B)
[2026-03-12 11:47:34] 2026-03-12 15:46:40,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 11:47:34] 2026-03-12 15:46:40,725 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 11:47:34] 2026-03-12 15:46:40,725 | INFO     | update_server=False
[2026-03-12 11:47:34] 2026-03-12 15:46:40,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 11:47:34] 2026-03-12 15:46:40,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 11:47:34] 2026-03-12 15:46:41,054 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 11:47:34] 2026-03-12 15:46:41,054 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 11:47:34] 2026-03-12 15:46:41,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 11:47:34] 2026-03-12 15:46:41,054 | INFO     | will abort loop
[2026-03-12 11:47:34] 2026-03-12 15:46:41,711 | INFO     | all data control threads have been joined
[2026-03-12 11:47:34] 2026-03-12 15:46:41,731 | INFO     | [job] retrieve thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:41,779 | INFO     | [payload] failed_post thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:41,815 | INFO     | [job] validate thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:41,969 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:41,991 | INFO     | [data] copytool_in thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,014 | INFO     | all payload control threads have been joined
[2026-03-12 11:47:34] 2026-03-12 15:46:42,060 | INFO     | [job] job monitor thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,207 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,208 | INFO     | all job control threads have been joined
[2026-03-12 11:47:34] 2026-03-12 15:46:42,249 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,329 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,717 | INFO     | [data] control thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,757 | INFO     | [data] copytool_out thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:42,897 | INFO     | [payload] validate_post thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:43,019 | INFO     | [payload] control thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:43,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 11:47:34] 2026-03-12 15:46:43,214 | INFO     | [job] control thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:43,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 11:47:34] 2026-03-12 15:46:44,044 | INFO     | [job] queue monitor thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:46:47,810 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 11:47:34] 2026-03-12 15:47:11,484 | INFO     | PID=4094533 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 11:47:34] 2026-03-12 15:47:11,484 | INFO     | .. there are 32 such processes running
[2026-03-12 11:47:34] 2026-03-12 15:47:11,484 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 11:47:34] 2026-03-12 15:47:11,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 11:47:34] 2026-03-12 15:47:11,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 11:47:34] 2026-03-12 15:47:27,371 | INFO     | [monitor] cgroup control has ended
[2026-03-12 11:47:34] 2026-03-12 15:47:28,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824208787264)>', '<ExcThread(monitor, started 139823826315008)>']
[2026-03-12 11:47:34] 2026-03-12 15:47:28,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 11:47:34] 2026-03-12 15:47:28,591 | INFO     | [monitor] control thread has ended
[2026-03-12 11:47:34] 2026-03-12 15:47:33,369 | INFO     | all workflow threads have been joined
[2026-03-12 11:47:34] 2026-03-12 15:47:33,369 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 11:47:34] 2026-03-12 15:47:33,369 | INFO     | traces error code: 0
[2026-03-12 11:47:34] 2026-03-12 15:47:33,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 11:47:34] 2026-03-12 15:47:33,498 [wrapper] ==== pilot stdout END ====
[2026-03-12 11:47:34] 2026-03-12 15:47:33,502 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 11:47:34] 2026-03-12 15:47:33,510 [wrapper] pilotpid: 4094533
[2026-03-12 11:47:34] 2026-03-12 15:47:33,514 [wrapper] Pilot exit status: 0
[2026-03-12 11:47:34] 2026-03-12 15:47:33,584 [wrapper] pandaids: 7037229421
[2026-03-12 11:47:34] 2026-03-12 15:47:33,957 [wrapper] cleanup supervisor_pilot  635260 4094534
[2026-03-12 11:47:34] 2026-03-12 15:47:33,981 [wrapper] Test setup, not cleaning
[2026-03-12 11:47:34] 2026-03-12 15:47:34,000 [wrapper] apfmon messages muted
[2026-03-12 11:47:34] 2026-03-12 15:47:34,020 [wrapper] ==== wrapper stdout END ====
[2026-03-12 11:47:34] 2026-03-12 15:47:34,047 [wrapper] ==== wrapper stderr END ====
[2026-03-12 11:47:34]  *** Error codes and diagnostics ***
[2026-03-12 11:47:34]     "exeErrorCode": 0,
[2026-03-12 11:47:34]     "exeErrorDiag": "",
[2026-03-12 11:47:34]     "pilotErrorCode": 0,
[2026-03-12 11:47:34]     "pilotErrorDiag": "",
[2026-03-12 11:47:34]  *** Listing of results directory ***
[2026-03-12 11:47:34] total 443220
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 23:50 queuedata.json
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 23:50 pilot3.tar.gz
[2026-03-12 11:47:34] -rwx------. 1 boincer umatlas     36322 Mar  3 23:50 runpilot2-wrapper.sh
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas       100 Mar 12 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 11:47:34] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 06:42 run_atlas
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas       105 Mar 12 06:42 job.xml
[2026-03-12 11:47:34] -rw-r--r--. 2 boincer umatlas 264213671 Mar 12 06:42 EVNT.48564813._000004.pool.root.1
[2026-03-12 11:47:34] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 06:42 shared
[2026-03-12 11:47:34] -rw-r--r--. 2 boincer umatlas    597942 Mar 12 06:42 input.tar.gz
[2026-03-12 11:47:34] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 06:42 start_atlas.sh
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas         0 Mar 12 06:42 boinc_lockfile
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas      2549 Mar 12 06:42 pandaJob.out
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas        57 Mar 12 06:42 setup.sh.local
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas   1006241 Mar 12 06:43 agis_schedconf.cvmfs.json
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas       430 Mar 12 06:43 workernode_map.json
[2026-03-12 11:47:34] drwx------. 5 boincer umatlas      4096 Mar 12 06:43 pilot3
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas 180132395 Mar 12 11:45 HITS.48937842._000051.pool.root.1
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas       531 Mar 12 11:45 boinc_task_state.xml
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas      1036 Mar 12 11:46 memory_monitor_summary.json
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas      6959 Mar 12 11:46 init_data.xml
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas   1511578 Mar 12 11:46 agis_ddmendpoints.agis.ALL.json
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas    485063 Mar 12 11:46 log.48937842._000051.job.log.tgz.1
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas      6318 Mar 12 11:46 heartbeat.json
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas        95 Mar 12 11:47 pilot_heartbeat.json
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 11:47 boinc_mmap_file
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas      5007 Mar 12 11:47 pilotlog.txt
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas   2298738 Mar 12 11:47 log.48937842._000051.job.log.1
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas        28 Mar 12 11:47 wrapper_checkpoint.txt
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas       357 Mar 12 11:47 output.list
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas       620 Mar 12 11:47 runtime_log
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas   2805760 Mar 12 11:47 result.tar.gz
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas      9342 Mar 12 11:47 runtime_log.err
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas       655 Mar 12 11:47 72OMDmoMtH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmUQHLDmd8ntxn.diag
[2026-03-12 11:47:34] -rw-r--r--. 1 boincer umatlas     21098 Mar 12 11:47 stderr.txt
[2026-03-12 11:47:34] HITS file was successfully produced:
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas 180132395 Mar 12 11:45 shared/HITS.pool.root.1
[2026-03-12 11:47:34]  *** Contents of shared directory: ***
[2026-03-12 11:47:34] total 437280
[2026-03-12 11:47:34] -rw-r--r--. 2 boincer umatlas 264213671 Mar 12 06:42 ATLAS.root_0
[2026-03-12 11:47:34] -rw-r--r--. 2 boincer umatlas    597942 Mar 12 06:42 input.tar.gz
[2026-03-12 11:47:34] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 06:42 start_atlas.sh
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas 180132395 Mar 12 11:45 HITS.pool.root.1
[2026-03-12 11:47:34] -rw-------. 1 boincer umatlas   2805760 Mar 12 11:47 result.tar.gz
11:47:36 (4089027): run_atlas exited; CPU time 28970.833292
11:47:36 (4089027): called boinc_finish(0)

</stderr_txt>
]]>

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