Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:19:17 (497890): wrapper (7.7.26015): starting
21:19:17 (497890): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 21:19:17] Arguments: --nthreads 12
[2026-03-12 21:19:17] Threads: 12
[2026-03-12 21:19:17] Checking for CVMFS
[2026-03-12 21:19:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 21:19:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 21:19:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 21:19:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 21:19:17] 2.12.7.0 4877 503 60472 157221 0 188 2126553 4194305 2680 130560 0 1126375 99.997 15318 2036 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-12 21:19:17] CVMFS is ok
[2026-03-12 21:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 21:19:17] Checking for apptainer binary...
[2026-03-12 21:19:17] apptainer is not installed, using version from CVMFS
[2026-03-12 21:19:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 21:19:17] Trebeth
[2026-03-12 21:19:17] apptainer works
[2026-03-12 21:19:17] Set ATHENA_PROC_NUMBER=12
[2026-03-12 21:19:17] Set ATHENA_CORE_NUMBER=12
[2026-03-12 21:19:17] Starting ATLAS job with PandaID=7051470193
[2026-03-12 21:19:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 22:20:55]  *** The last 200 lines of the pilot log: ***
[2026-03-12 22:20:55]  is_tar=False
[2026-03-12 22:20:55]  lfn=log.48958635._003284.job.log.tgz.1
[2026-03-12 22:20:55]  mtime=0
[2026-03-12 22:20:55]  protocol_id=None
[2026-03-12 22:20:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 22:20:55]  replicas=None
[2026-03-12 22:20:55]  scope=mc23_13p6TeV
[2026-03-12 22:20:55]  status=None
[2026-03-12 22:20:55]  status_code=0
[2026-03-12 22:20:55]  storage_token=
[2026-03-12 22:20:55]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-7051470193/log.48958635._003284.job.log.tgz.1
[2026-03-12 22:20:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/47/log.48958635._003284.job.log.tgz.1
[2026-03-12 22:20:55]  workdir=None
[2026-03-12 22:20:55] ]
[2026-03-12 22:20:55] 2026-03-13 02:20:18,779 | INFO     | transferring file log.48958635._003284.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-7051470193/log.48958635._003284.job.log.tgz.1 to /var/lib/boinc
[2026-03-12 22:20:55] 2026-03-13 02:20:18,780 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-7051470193/log.48958635._003284.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.489586
[2026-03-12 22:20:55] 2026-03-13 02:20:18,793 | INFO     | adding to output.list: log.48958635._003284.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/47/log.48958635._003284.job.log.tg
[2026-03-12 22:20:55] 2026-03-13 02:20:18,794 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 22:20:55] 2026-03-13 02:20:18,794 | INFO     | summary of transferred files:
[2026-03-12 22:20:55] 2026-03-13 02:20:18,794 | INFO     |  -- lfn=log.48958635._003284.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 22:20:55] 2026-03-13 02:20:18,794 | INFO     | stage-out finished correctly
[2026-03-12 22:20:55] 2026-03-13 02:20:19,160 | INFO     | monitor loop #276: job 0:7051470193 is in state 'finished'
[2026-03-12 22:20:55] 2026-03-13 02:20:19,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 22:20:55] 2026-03-13 02:20:19,828 | INFO     | time since job start (3648s) is within the limit (345600.0s)
[2026-03-12 22:20:55] 2026-03-13 02:20:20,235 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 22:20:55] 2026-03-13 02:20:21,624 | INFO     | job 7051470193 has state=finished
[2026-03-12 22:20:55] 2026-03-13 02:20:21,624 | INFO     | preparing for final server update for job 7051470193 in state='finished'
[2026-03-12 22:20:55] 2026-03-13 02:20:21,662 | INFO     | monitor loop #277: job 0:7051470193 is in state 'finished'
[2026-03-12 22:20:55] 2026-03-13 02:20:21,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 22:20:55] 2026-03-13 02:20:21,834 | INFO     | time since job start (3650s) is within the limit (345600.0s)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,151 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,152 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-7051470193/jobReport.json
[2026-03-12 22:20:55] 2026-03-13 02:20:22,154 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-03-12 22:20:55] 2026-03-13 02:20:22,154 | INFO     | this job has now completed (state=finished)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,154 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,154 | INFO     | log transfer has been attempted: DONE
[2026-03-12 22:20:55] 2026-03-13 02:20:22,154 | INFO     | job 7051470193 has finished - writing final server update
[2026-03-12 22:20:55] 2026-03-13 02:20:22,155 | INFO     | total number of processed events: 400 (read)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,187 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7051470193/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,188 | INFO     | extracted standard info from prmon json
[2026-03-12 22:20:55] 2026-03-13 02:20:22,188 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 22:20:55] 2026-03-13 02:20:22,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 22:20:55] 2026-03-13 02:20:22,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 22:20:55] 2026-03-13 02:20:22,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 22:20:55] 2026-03-13 02:20:22,190 | INFO     | fitting pss+swap vs Time
[2026-03-12 22:20:55] 2026-03-13 02:20:22,190 | INFO     | sum of square deviations: 46147842.0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,190 | INFO     | sum of deviations: 2019954183.0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,190 | INFO     | mean x: 1773366681.0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,191 | INFO     | mean y: 2709377.1886792453
[2026-03-12 22:20:55] 2026-03-13 02:20:22,191 | INFO     | intersect: -77619976539.06233
[2026-03-12 22:20:55] 2026-03-13 02:20:22,191 | INFO     | chi2: 0.13001003534020733
[2026-03-12 22:20:55] 2026-03-13 02:20:22,191 | INFO     | current memory leak: 43.77 B/s (using 53 data points, chi2=0.13)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,191 | INFO     | could have reported an average CPU frequency of 2108 MHz (6 samples)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | ..............................
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . Timing measurements:
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . get job = 0 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . initial setup = 6 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . payload setup = 4 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . stage-in = 0 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . payload execution = 3626 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . stage-out = 0 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | . log creation = 0 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,192 | INFO     | ..............................
[2026-03-12 22:20:55] 2026-03-13 02:20:22,276 | INFO     | 
[2026-03-12 22:20:55] 2026-03-13 02:20:22,276 | INFO     | job summary report
[2026-03-12 22:20:55] 2026-03-13 02:20:22,276 | INFO     | --------------------------------------------------
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | PanDA job id: 7051470193
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | task id: 48958635
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | errors: (none)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | pilot state: finished 
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | transexitcode: 0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | exeerrorcode: 0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | exeerrordiag: 
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | exitcode: 0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,277 | INFO     | exitmsg: OK
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | cpuconsumptiontime: 38075 s
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | nevents: 400
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | neventsw: 0
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | pid: 506674
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | pgrp: 506674
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | corecount: 12
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | event service: False
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | sizes: {0: 2279096, 1: 2280221, 11: 2280221, 3634: 2306008, 3636: 2315020, 3638: 2315076, 3640: 2315398}
[2026-03-12 22:20:55] 2026-03-13 02:20:22,278 | INFO     | --------------------------------------------------
[2026-03-12 22:20:55] 2026-03-13 02:20:22,279 | INFO     | 
[2026-03-12 22:20:55] 2026-03-13 02:20:22,279 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,300 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,300 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 22:20:55] 2026-03-13 02:20:22,300 | INFO     | job 7051470193 has completed (purged errors)
[2026-03-12 22:20:55] 2026-03-13 02:20:22,300 | INFO     | overall cleanup function is called
[2026-03-12 22:20:55] 2026-03-13 02:20:23,308 | INFO     | --- collectZombieJob: --- 10, [506674]
[2026-03-12 22:20:55] 2026-03-13 02:20:23,309 | INFO     | zombie collector waiting for pid 506674
[2026-03-12 22:20:55] 2026-03-13 02:20:23,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 22:20:55] 2026-03-13 02:20:23,309 | INFO     | collected zombie processes
[2026-03-12 22:20:55] 2026-03-13 02:20:23,309 | INFO     | will attempt to kill all subprocesses of pid=506674
[2026-03-12 22:20:55] 2026-03-13 02:20:23,521 | INFO     | process IDs to be killed: [506674] (in reverse order)
[2026-03-12 22:20:55] 2026-03-13 02:20:23,563 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 22:20:55] 2026-03-13 02:20:23,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 22:20:55] 2026-03-13 02:20:23,566 | INFO     | did not find any defunct processes belonging to 506674
[2026-03-12 22:20:55] 2026-03-13 02:20:23,569 | INFO     | did not find any defunct processes belonging to 506674
[2026-03-12 22:20:55] 2026-03-13 02:20:23,569 | INFO     | ready for new job
[2026-03-12 22:20:55] 2026-03-13 02:20:23,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 22:20:55] 2026-03-13 02:20:23,570 | INFO     | **************************************
[2026-03-12 22:20:55] 2026-03-13 02:20:23,571 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 22:20:55] 2026-03-13 02:20:23,571 | INFO     | **************************************
[2026-03-12 22:20:55] 2026-03-13 02:20:23,571 | INFO     | 
[2026-03-12 22:20:55] 2026-03-13 02:20:23,595 | INFO     | architecture information:
[2026-03-12 22:20:55] 2026-03-13 02:20:23,595 | INFO     | executing command: cat /etc/os-release
[2026-03-12 22:20:55] 2026-03-13 02:20:23,607 | INFO     | cat /etc/os-release:
[2026-03-12 22:20:55] NAME="CentOS Linux"
[2026-03-12 22:20:55] VERSION="7 (Core)"
[2026-03-12 22:20:55] ID="centos"
[2026-03-12 22:20:55] ID_LIKE="rhel fedora"
[2026-03-12 22:20:55] VERSION_ID="7"
[2026-03-12 22:20:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 22:20:55] ANSI_COLOR="0;31"
[2026-03-12 22:20:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 22:20:55] HOME_URL="https://www.centos.org/"
[2026-03-12 22:20:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 22:20:55] 
[2026-03-12 22:20:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 22:20:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 22:20:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 22:20:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 22:20:55] 
[2026-03-12 22:20:55] 2026-03-13 02:20:23,608 | INFO     | **************************************
[2026-03-12 22:20:55] 2026-03-13 02:20:24,110 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-12 22:20:55] 2026-03-13 02:20:24,124 | INFO     | sufficient remaining disk space (398403305472 B)
[2026-03-12 22:20:55] 2026-03-13 02:20:24,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 22:20:55] 2026-03-13 02:20:24,124 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 22:20:55] 2026-03-13 02:20:24,124 | INFO     | update_server=False
[2026-03-12 22:20:55] 2026-03-13 02:20:24,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 22:20:55] 2026-03-13 02:20:24,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 22:20:55] 2026-03-13 02:20:24,165 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 22:20:55] 2026-03-13 02:20:24,166 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 22:20:55] 2026-03-13 02:20:24,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 22:20:55] 2026-03-13 02:20:24,166 | INFO     | will abort loop
[2026-03-12 22:20:55] 2026-03-13 02:20:24,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 22:20:55] 2026-03-13 02:20:24,438 | INFO     | all payload control threads have been joined
[2026-03-12 22:20:55] 2026-03-13 02:20:24,958 | INFO     | all data control threads have been joined
[2026-03-12 22:20:55] 2026-03-13 02:20:25,130 | INFO     | [job] retrieve thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,130 | INFO     | [job] queue monitor thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,143 | INFO     | all job control threads have been joined
[2026-03-12 22:20:55] 2026-03-13 02:20:25,171 | INFO     | [job] job monitor thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,398 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,443 | INFO     | [payload] control thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,598 | INFO     | [payload] validate_post thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,899 | INFO     | [payload] failed_post thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:25,964 | INFO     | [data] control thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,066 | INFO     | [job] validate thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,108 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,148 | INFO     | [job] control thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,164 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 22:20:55] 2026-03-13 02:20:26,390 | INFO     | [data] copytool_out thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,404 | INFO     | [data] copytool_in thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:26,502 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:30,326 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 22:20:55] 2026-03-13 02:20:36,134 | INFO     | [monitor] cgroup control has ended
[2026-03-12 22:20:55] 2026-03-13 02:20:36,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369433249600)>', '<ExcThread(monitor, started 140369206458112)>']
[2026-03-12 22:20:55] 2026-03-13 02:20:41,682 | INFO     | all workflow threads have been joined
[2026-03-12 22:20:55] 2026-03-13 02:20:41,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 22:20:55] 2026-03-13 02:20:41,683 | INFO     | traces error code: 0
[2026-03-12 22:20:55] 2026-03-13 02:20:41,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 22:20:55] 2026-03-13 02:20:55,203 | INFO     | PID=501870 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 22:20:55] 2026-03-13 02:20:55,203 | INFO     | .. there are 4 such processes running
[2026-03-12 22:20:55] 2026-03-13 02:20:55,203 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 22:20:55] 2026-03-13 02:20:55,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 22:20:55] 2026-03-13 02:20:55,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 22:20:55] 2026-03-13 02:20:55,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 22:20:55] 2026-03-13 02:20:55,204 | INFO     | [monitor] control thread has ended
[2026-03-12 22:20:55] 2026-03-13 02:20:55,309 [wrapper] ==== pilot stdout END ====
[2026-03-12 22:20:55] 2026-03-13 02:20:55,311 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 22:20:55] 2026-03-13 02:20:55,313 [wrapper] pilotpid: 501870
[2026-03-12 22:20:55] 2026-03-13 02:20:55,315 [wrapper] Pilot exit status: 0
[2026-03-12 22:20:55] 2026-03-13 02:20:55,321 [wrapper] pandaids: 7051470193
[2026-03-12 22:20:55] 2026-03-13 02:20:55,362 [wrapper] cleanup supervisor_pilot  550841 501871
[2026-03-12 22:20:55] 2026-03-13 02:20:55,364 [wrapper] Test setup, not cleaning
[2026-03-12 22:20:55] 2026-03-13 02:20:55,366 [wrapper] apfmon messages muted
[2026-03-12 22:20:55] 2026-03-13 02:20:55,368 [wrapper] ==== wrapper stdout END ====
[2026-03-12 22:20:55] 2026-03-13 02:20:55,370 [wrapper] ==== wrapper stderr END ====
[2026-03-12 22:20:55]  *** Error codes and diagnostics ***
[2026-03-12 22:20:55]     "exeErrorCode": 0,
[2026-03-12 22:20:55]     "exeErrorDiag": "",
[2026-03-12 22:20:55]     "pilotErrorCode": 0,
[2026-03-12 22:20:55]     "pilotErrorDiag": "",
[2026-03-12 22:20:55]  *** Listing of results directory ***
[2026-03-12 22:20:55] total 452240
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc    585013 Mar 12 05:16 pilot3.tar.gz
[2026-03-12 22:20:55] -rwx------ 1 boinc boinc     36322 Mar 12 05:19 runpilot2-wrapper.sh
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc      5111 Mar 12 05:20 queuedata.json
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc       100 Mar 12 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 22:20:55] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 21:19 run_atlas
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc       105 Mar 12 21:19 job.xml
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc      7579 Mar 12 21:19 init_data.xml
[2026-03-12 22:20:55] -rw-r--r-- 2 boinc boinc 267771033 Mar 12 21:19 EVNT.48958633._000129.pool.root.1
[2026-03-12 22:20:55] -rw-r--r-- 2 boinc boinc     15845 Mar 12 21:19 start_atlas.sh
[2026-03-12 22:20:55] drwxrwx--x 2 boinc boinc      4096 Mar 12 21:19 shared
[2026-03-12 22:20:55] -rw-r--r-- 2 boinc boinc    597511 Mar 12 21:19 input.tar.gz
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc         0 Mar 12 21:19 boinc_lockfile
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc      2525 Mar 12 21:19 pandaJob.out
[2026-03-12 22:20:55] -rw------- 1 boinc boinc        50 Mar 12 21:19 setup.sh.local
[2026-03-12 22:20:55] -rw------- 1 boinc boinc   1006522 Mar 12 21:19 agis_schedconf.cvmfs.json
[2026-03-12 22:20:55] -rw------- 1 boinc boinc   1511578 Mar 12 21:19 agis_ddmendpoints.agis.ALL.json
[2026-03-12 22:20:55] -rw------- 1 boinc boinc       429 Mar 12 21:19 workernode_map.json
[2026-03-12 22:20:55] drwx------ 5 boinc boinc      4096 Mar 12 21:19 pilot3
[2026-03-12 22:20:55] -rw------- 1 boinc boinc 189517106 Mar 12 22:19 HITS.48958635._003284.pool.root.1
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc       529 Mar 12 22:19 boinc_task_state.xml
[2026-03-12 22:20:55] -rw------- 1 boinc boinc      1025 Mar 12 22:20 memory_monitor_summary.json
[2026-03-12 22:20:55] -rw------- 1 boinc boinc    380585 Mar 12 22:20 log.48958635._003284.job.log.tgz.1
[2026-03-12 22:20:55] -rw------- 1 boinc boinc        95 Mar 12 22:20 pilot_heartbeat.json
[2026-03-12 22:20:55] -rw------- 1 boinc boinc      6333 Mar 12 22:20 heartbeat.json
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc        27 Mar 12 22:20 wrapper_checkpoint.txt
[2026-03-12 22:20:55] -rw------- 1 boinc boinc       821 Mar 12 22:20 pilotlog.txt
[2026-03-12 22:20:55] -rw------- 1 boinc boinc    555965 Mar 12 22:20 log.48958635._003284.job.log.1
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc      8192 Mar 12 22:20 boinc_mmap_file
[2026-03-12 22:20:55] -rw------- 1 boinc boinc       357 Mar 12 22:20 output.list
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc       620 Mar 12 22:20 runtime_log
[2026-03-12 22:20:55] -rw------- 1 boinc boinc    952320 Mar 12 22:20 result.tar.gz
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc      9403 Mar 12 22:20 runtime_log.err
[2026-03-12 22:20:55] -rw------- 1 boinc boinc       650 Mar 12 22:20 1kxLDmYNrK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmoUmLDm31Lkmm.diag
[2026-03-12 22:20:55] -rw-r--r-- 1 boinc boinc     21306 Mar 12 22:20 stderr.txt
[2026-03-12 22:20:55] HITS file was successfully produced:
[2026-03-12 22:20:55] -rw------- 1 boinc boinc 189517106 Mar 12 22:19 shared/HITS.pool.root.1
[2026-03-12 22:20:55]  *** Contents of shared directory: ***
[2026-03-12 22:20:55] total 448112
[2026-03-12 22:20:55] -rw-r--r-- 2 boinc boinc 267771033 Mar 12 21:19 ATLAS.root_0
[2026-03-12 22:20:55] -rw-r--r-- 2 boinc boinc     15845 Mar 12 21:19 start_atlas.sh
[2026-03-12 22:20:55] -rw-r--r-- 2 boinc boinc    597511 Mar 12 21:19 input.tar.gz
[2026-03-12 22:20:55] -rw------- 1 boinc boinc 189517106 Mar 12 22:19 HITS.pool.root.1
[2026-03-12 22:20:55] -rw------- 1 boinc boinc    952320 Mar 12 22:20 result.tar.gz
22:20:57 (497890): run_atlas exited; CPU time 38138.724697
22:20:57 (497890): called boinc_finish(0)

</stderr_txt>
]]>

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