Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:17:41 (3892836): wrapper (7.7.26015): starting
05:17:41 (3892836): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 05:17:41] Arguments: --nthreads 8
[2026-03-12 05:17:41] Threads: 8
[2026-03-12 05:17:41] Checking for CVMFS
[2026-03-12 05:17:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 05:17:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 05:17:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 05:17:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 05:17:42] 2.13.3.0 14328 182477 291396 157195 0 236 36328186 40960000 80275 16776704 0 1833764047 99.728 1317412288 47986 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 05:17:42] CVMFS is ok
[2026-03-12 05:17:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 05:17:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 05:17:42] Further information can be found at the LHC@home message board.
[2026-03-12 05:17:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 05:17:42] Checking for apptainer binary...
[2026-03-12 05:17:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 05:17:42] Running /usr/bin/apptainer --version
[2026-03-12 05:17:42] apptainer version 1.4.5-2.el9
[2026-03-12 05:17:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 05:17:43] c8-16-2.aglt2.org
[2026-03-12 05:17:43] apptainer works
[2026-03-12 05:17:43] Set ATHENA_PROC_NUMBER=8
[2026-03-12 05:17:43] Set ATHENA_CORE_NUMBER=8
[2026-03-12 05:17:43] Starting ATLAS job with PandaID=7037166624
[2026-03-12 05:17:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 07:13:36]  *** The last 200 lines of the pilot log: ***
[2026-03-12 07:13:36] 2026-03-12 11:12:56,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 07:13:36] 2026-03-12 11:12:56,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 07:13:36] 2026-03-12 11:12:56,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 07:13:36] 2026-03-12 11:12:56,619 | INFO     | fitting pss+swap vs Time
[2026-03-12 07:13:36] 2026-03-12 11:12:56,619 | INFO     | sum of square deviations: 401541051.8899085
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | sum of deviations: 16962150827.550446
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | mean x: 1773310613.1009173
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | mean y: 2454849.4954128442
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | intersect: -74906852534.99736
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | chi2: 3.413027142818373
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | sum of square deviations: 348767449.2211526
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | sum of deviations: 23368023219.461555
[2026-03-12 07:13:36] 2026-03-12 11:12:56,620 | INFO     | mean x: 1773310460.5865386
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | mean y: 2472588.6153846155
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | intersect: -118812399931.27989
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | chi2: 2.6715238341381005
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | current chi2=2.6715238341381005 (change=21.7256786322526 %)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | right removable region: 103
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | sum of square deviations: 348773916.83653814
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | sum of deviations: -8177408402.028846
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | mean x: 1773310765.6057692
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | mean y: 2526576.048076923
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | intersect: 41579851181.056114
[2026-03-12 07:13:36] 2026-03-12 11:12:56,621 | INFO     | chi2: 0.8451848238147839
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | current chi2=0.8451848238147839 (change=75.23650447394755 %)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | sum of square deviations: 300844081.7777784
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | sum of deviations: -10181978557.333334
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | mean x: 1773310918.1111112
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | mean y: 2532772.121212121
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | intersect: 60019713887.98421
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | chi2: 0.8068705276243436
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | current chi2=0.8068705276243436 (change=4.533244695226159 %)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | left removable region: 20
[2026-03-12 07:13:36] 2026-03-12 11:12:56,622 | INFO     | sum of square deviations: 177258445.22891554
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | sum of deviations: -2715239965.5542164
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | mean x: 1773311040.0963855
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | mean y: 2555101.8192771086
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | intersect: 27166084609.313644
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | chi2: 0.004115220239378107
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | current memory leak: -15.32 B/s (using 83 data points, chi2=0.00)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | ..............................
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . Timing measurements:
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . get job = 0 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . initial setup = 53 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . payload setup = 56 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . stage-in = 0 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . payload execution = 6692 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . stage-out = 3 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | . log creation = 0 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,623 | INFO     | ..............................
[2026-03-12 07:13:36] 2026-03-12 11:12:56,689 | INFO     | time since job start (6773s) is within the limit (349056.0s)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | 
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | job summary report
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | --------------------------------------------------
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | PanDA job id: 7037166624
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | task id: 48936124
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | errors: (none)
[2026-03-12 07:13:36] 2026-03-12 11:12:56,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | pilot state: finished 
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | transexitcode: 0
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | exeerrorcode: 0
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | exeerrordiag: 
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | exitcode: 0
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | exitmsg: OK
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | cpuconsumptiontime: 19616 s
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | nevents: 400
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | neventsw: 0
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | pid: 3958035
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | pgrp: 3958035
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | corecount: 8
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | event service: False
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | sizes: {0: 2279104, 1: 2279789, 2: 2244739, 3: 2280250, 13: 2280278, 6754: 2307535, 6758: 2316533, 6759: 2316589, 6760: 2316783}
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | --------------------------------------------------
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | 
[2026-03-12 07:13:36] 2026-03-12 11:12:56,857 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-03-12 07:13:36] 2026-03-12 11:12:57,048 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,048 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | job 7037166624 has completed (purged errors)
[2026-03-12 07:13:36] 2026-03-12 11:12:57,049 | INFO     | overall cleanup function is called
[2026-03-12 07:13:36] 2026-03-12 11:12:58,066 | INFO     | --- collectZombieJob: --- 10, [3958035]
[2026-03-12 07:13:36] 2026-03-12 11:12:58,092 | INFO     | zombie collector waiting for pid 3958035
[2026-03-12 07:13:36] 2026-03-12 11:12:58,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 07:13:36] 2026-03-12 11:12:58,092 | INFO     | collected zombie processes
[2026-03-12 07:13:36] 2026-03-12 11:12:58,092 | INFO     | will attempt to kill all subprocesses of pid=3958035
[2026-03-12 07:13:36] 2026-03-12 11:12:59,142 | WARNING  | process 3958035 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 07:13:36] 2026-03-12 11:13:02,714 | INFO     | using path: /tmp/boinchome/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 07:13:36] 2026-03-12 11:13:02,715 | INFO     | using path: /tmp/boinchome/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 07:13:36] 2026-03-12 11:13:02,715 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 07:13:36] 2026-03-12 11:13:02,715 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 07:13:36] 2026-03-12 11:13:02,715 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/6/PanDA_Pilot-7037166624/payload.stdout) since it has not been created yet
[2026-03-12 07:13:36] 2026-03-12 11:13:02,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-03-12 07:13:36] 2026-03-12 11:13:02,928 | INFO     | process IDs to be killed: [3958035] (in reverse order)
[2026-03-12 07:13:36] 2026-03-12 11:13:02,998 | INFO     | sufficient remaining disk space (169166766080 B)
[2026-03-12 07:13:36] 2026-03-12 11:13:02,999 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-12 07:13:36] 2026-03-12 11:13:02,999 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/6/PanDA_Pilot-7037166624/HITS.48936124._000060.pool.root.1 since it does not exist
[2026-03-12 07:13:36] 2026-03-12 11:13:03,635 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 07:13:36] 2026-03-12 11:13:03,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 07:13:36] 2026-03-12 11:13:03,879 | INFO     | did not find any defunct processes belonging to 3958035
[2026-03-12 07:13:36] 2026-03-12 11:13:04,081 | INFO     | did not find any defunct processes belonging to 3958035
[2026-03-12 07:13:36] 2026-03-12 11:13:04,081 | INFO     | ready for new job
[2026-03-12 07:13:36] 2026-03-12 11:13:04,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 07:13:36] 2026-03-12 11:13:04,082 | INFO     | **************************************
[2026-03-12 07:13:36] 2026-03-12 11:13:04,083 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 07:13:36] 2026-03-12 11:13:04,083 | INFO     | **************************************
[2026-03-12 07:13:36] 2026-03-12 11:13:04,083 | INFO     | 
[2026-03-12 07:13:36] 2026-03-12 11:13:04,150 | INFO     | architecture information:
[2026-03-12 07:13:36] 2026-03-12 11:13:04,199 | INFO     | executing command: cat /etc/os-release
[2026-03-12 07:13:36] 2026-03-12 11:13:04,360 | INFO     | cat /etc/os-release:
[2026-03-12 07:13:36] NAME="CentOS Linux"
[2026-03-12 07:13:36] VERSION="7 (Core)"
[2026-03-12 07:13:36] ID="centos"
[2026-03-12 07:13:36] ID_LIKE="rhel fedora"
[2026-03-12 07:13:36] VERSION_ID="7"
[2026-03-12 07:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 07:13:36] ANSI_COLOR="0;31"
[2026-03-12 07:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 07:13:36] HOME_URL="https://www.centos.org/"
[2026-03-12 07:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 07:13:36] 
[2026-03-12 07:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 07:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 07:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 07:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 07:13:36] 
[2026-03-12 07:13:36] 2026-03-12 11:13:04,361 | INFO     | **************************************
[2026-03-12 07:13:36] 2026-03-12 11:13:04,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-03-12 07:13:36] 2026-03-12 11:13:04,973 | INFO     | sufficient remaining disk space (169166766080 B)
[2026-03-12 07:13:36] 2026-03-12 11:13:04,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 07:13:36] 2026-03-12 11:13:04,973 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 07:13:36] 2026-03-12 11:13:04,973 | INFO     | update_server=False
[2026-03-12 07:13:36] 2026-03-12 11:13:04,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 07:13:36] 2026-03-12 11:13:05,153 | INFO     | all data control threads have been joined
[2026-03-12 07:13:36] 2026-03-12 11:13:05,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 07:13:36] 2026-03-12 11:13:05,854 | INFO     | all payload control threads have been joined
[2026-03-12 07:13:36] 2026-03-12 11:13:05,935 | INFO     | all job control threads have been joined
[2026-03-12 07:13:36] 2026-03-12 11:13:05,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:13:36] 2026-03-12 11:13:06,038 | INFO     | [job] retrieve thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,159 | INFO     | [data] control thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,172 | INFO     | number of running child processes to parent process 3958035: 1
[2026-03-12 07:13:36] 2026-03-12 11:13:06,172 | INFO     | maximum number of monitored processes: 6
[2026-03-12 07:13:36] 2026-03-12 11:13:06,172 | INFO     | aborting job monitoring since job object (job id=7037166624) has expired
[2026-03-12 07:13:36] 2026-03-12 11:13:06,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:13:36] 2026-03-12 11:13:06,172 | INFO     | will abort loop
[2026-03-12 07:13:36] 2026-03-12 11:13:06,224 | INFO     | [payload] failed_post thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,292 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,860 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,869 | INFO     | [payload] control thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,870 | INFO     | [payload] validate_post thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,936 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,941 | INFO     | [job] control thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:06,997 | INFO     | [job] queue monitor thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:07,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 07:13:36] 2026-03-12 11:13:07,178 | INFO     | [job] job monitor thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:07,357 | INFO     | [data] copytool_out thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:07,482 | INFO     | [data] copytool_in thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:07,497 | INFO     | [job] validate thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:11,041 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 07:13:36] 2026-03-12 11:13:14,560 | INFO     | [monitor] cgroup control has ended
[2026-03-12 07:13:36] 2026-03-12 11:13:14,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694404282176)>', '<ExcThread(monitor, started 139693450577664)>']
[2026-03-12 07:13:36] 2026-03-12 11:13:19,880 | INFO     | all workflow threads have been joined
[2026-03-12 07:13:36] 2026-03-12 11:13:19,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 07:13:36] 2026-03-12 11:13:19,881 | INFO     | traces error code: 0
[2026-03-12 07:13:36] 2026-03-12 11:13:19,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 07:13:36] 2026-03-12 11:13:32,172 | INFO     | PID=3917830 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 07:13:36] 2026-03-12 11:13:32,173 | INFO     | .. there are 113 such processes running
[2026-03-12 07:13:36] 2026-03-12 11:13:32,173 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 07:13:36] 2026-03-12 11:13:32,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 07:13:36] 2026-03-12 11:13:32,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 07:13:36] 2026-03-12 11:13:32,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 07:13:36] 2026-03-12 11:13:32,173 | INFO     | [monitor] control thread has ended
[2026-03-12 07:13:36] 2026-03-12 11:13:33,199 [wrapper] ==== pilot stdout END ====
[2026-03-12 07:13:36] 2026-03-12 11:13:33,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 07:13:36] 2026-03-12 11:13:33,255 [wrapper] pilotpid: 3917830
[2026-03-12 07:13:36] 2026-03-12 11:13:33,275 [wrapper] Pilot exit status: 0
[2026-03-12 07:13:36] 2026-03-12 11:13:33,523 [wrapper] pandaids: 7037166624
[2026-03-12 07:13:36] 2026-03-12 11:13:34,678 [wrapper] cleanup supervisor_pilot  747900 3917831
[2026-03-12 07:13:36] 2026-03-12 11:13:34,690 [wrapper] Test setup, not cleaning
[2026-03-12 07:13:36] 2026-03-12 11:13:34,735 [wrapper] apfmon messages muted
[2026-03-12 07:13:36] 2026-03-12 11:13:34,862 [wrapper] ==== wrapper stdout END ====
[2026-03-12 07:13:36] 2026-03-12 11:13:34,905 [wrapper] ==== wrapper stderr END ====
[2026-03-12 07:13:36]  *** Error codes and diagnostics ***
[2026-03-12 07:13:36]     "exeErrorCode": 0,
[2026-03-12 07:13:36]     "exeErrorDiag": "",
[2026-03-12 07:13:36]     "pilotErrorCode": 0,
[2026-03-12 07:13:36]     "pilotErrorDiag": "",
[2026-03-12 07:13:36]  *** Listing of results directory ***
[2026-03-12 07:13:36] total 441744
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 22:50 pilot3.tar.gz
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 22:50 queuedata.json
[2026-03-12 07:13:36] -rwx------. 1 boincer umatlas     36322 Mar  3 22:51 runpilot2-wrapper.sh
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas       100 Mar 12 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 07:13:36] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 05:17 run_atlas
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas       105 Mar 12 05:17 job.xml
[2026-03-12 07:13:36] -rw-r--r--. 2 boincer umatlas 261049762 Mar 12 05:17 EVNT.48564674._000003.pool.root.1
[2026-03-12 07:13:36] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 05:17 start_atlas.sh
[2026-03-12 07:13:36] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 05:17 shared
[2026-03-12 07:13:36] -rw-r--r--. 2 boincer umatlas    597931 Mar 12 05:17 input.tar.gz
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas         0 Mar 12 05:17 boinc_lockfile
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas      2535 Mar 12 05:17 pandaJob.out
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas        57 Mar 12 05:17 setup.sh.local
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas   1006243 Mar 12 05:19 agis_schedconf.cvmfs.json
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas   1511578 Mar 12 05:19 agis_ddmendpoints.agis.ALL.json
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas       430 Mar 12 05:19 workernode_map.json
[2026-03-12 07:13:36] drwx------. 5 boincer umatlas      4096 Mar 12 05:20 pilot3
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas      7173 Mar 12 07:10 init_data.xml
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas 185022985 Mar 12 07:11 HITS.48936124._000060.pool.root.1
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas       529 Mar 12 07:11 boinc_task_state.xml
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas      1039 Mar 12 07:12 memory_monitor_summary.json
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas    341660 Mar 12 07:12 log.48936124._000060.job.log.tgz.1
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas      6330 Mar 12 07:12 heartbeat.json
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas       825 Mar 12 07:13 pilotlog.txt
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas        95 Mar 12 07:13 pilot_heartbeat.json
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas        27 Mar 12 07:13 wrapper_checkpoint.txt
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 07:13 boinc_mmap_file
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas    823628 Mar 12 07:13 log.48936124._000060.job.log.1
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas       357 Mar 12 07:13 output.list
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas       620 Mar 12 07:13 runtime_log
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas   1187840 Mar 12 07:13 result.tar.gz
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas      9336 Mar 12 07:13 runtime_log.err
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas       651 Mar 12 07:13 DgHLDmVRsH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVJHLDmYSnGsm.diag
[2026-03-12 07:13:36] -rw-r--r--. 1 boincer umatlas     21336 Mar 12 07:13 stderr.txt
[2026-03-12 07:13:36] HITS file was successfully produced:
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas 185022985 Mar 12 07:11 shared/HITS.pool.root.1
[2026-03-12 07:13:36]  *** Contents of shared directory: ***
[2026-03-12 07:13:36] total 437388
[2026-03-12 07:13:36] -rw-r--r--. 2 boincer umatlas 261049762 Mar 12 05:17 ATLAS.root_0
[2026-03-12 07:13:36] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 05:17 start_atlas.sh
[2026-03-12 07:13:36] -rw-r--r--. 2 boincer umatlas    597931 Mar 12 05:17 input.tar.gz
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas 185022985 Mar 12 07:11 HITS.pool.root.1
[2026-03-12 07:13:36] -rw-------. 1 boincer umatlas   1187840 Mar 12 07:13 result.tar.gz
07:13:37 (3892836): run_atlas exited; CPU time 19857.048577
07:13:37 (3892836): called boinc_finish(0)

</stderr_txt>
]]>

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