Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:24 (25236): wrapper (7.7.26015): starting
04:52:24 (25236): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 04:52:24] Arguments: --nthreads 8
[2026-03-12 04:52:24] Threads: 8
[2026-03-12 04:52:24] Checking for CVMFS
[2026-03-12 04:52:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 04:52:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 04:52:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 04:52:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 04:52:25] 2.11.2.0 3838 294888 150968 157193 3 54 16694514 18432001 1009 130560 0 210235352 99.989 10120579 25148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 04:52:25] CVMFS is ok
[2026-03-12 04:52:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 04:52:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 04:52:25] Further information can be found at the LHC@home message board.
[2026-03-12 04:52:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 04:52:25] Checking for apptainer binary...
[2026-03-12 04:52:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 04:52:25] Running /usr/bin/apptainer --version
[2026-03-12 04:52:25] apptainer version 1.3.2-1.el7
[2026-03-12 04:52:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 04:52:25] c-206-4.aglt2.org
[2026-03-12 04:52:25] apptainer works
[2026-03-12 04:52:25] Set ATHENA_PROC_NUMBER=8
[2026-03-12 04:52:25] Set ATHENA_CORE_NUMBER=8
[2026-03-12 04:52:25] Starting ATLAS job with PandaID=7051010778
[2026-03-12 04:52:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:37:10]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:37:10] 2026-03-12 12:36:09,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,126 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:37:10] 2026-03-12 12:36:09,126 | INFO     | job 7051010778 has finished - writing final server update
[2026-03-12 08:37:10] 2026-03-12 12:36:09,126 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,131 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7051010778/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,132 | INFO     | extracted standard info from prmon json
[2026-03-12 08:37:10] 2026-03-12 12:36:09,132 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:37:10] 2026-03-12 12:36:09,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:37:10] 2026-03-12 12:36:09,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:37:10] 2026-03-12 12:36:09,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:37:10] 2026-03-12 12:36:09,139 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:37:10] 2026-03-12 12:36:09,140 | INFO     | sum of square deviations: 3301699115.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,142 | INFO     | sum of deviations: 22462509917.500004
[2026-03-12 08:37:10] 2026-03-12 12:36:09,142 | INFO     | mean x: 1773312260.5
[2026-03-12 08:37:10] 2026-03-12 12:36:09,142 | INFO     | mean y: 2460147.477272727
[2026-03-12 08:37:10] 2026-03-12 12:36:09,143 | INFO     | intersect: -12061947556.222767
[2026-03-12 08:37:10] 2026-03-12 12:36:09,143 | INFO     | chi2: 2.361110527057442
[2026-03-12 08:37:10] 2026-03-12 12:36:09,144 | INFO     | sum of square deviations: 3081657780.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,146 | INFO     | sum of deviations: 36351665522.99999
[2026-03-12 08:37:10] 2026-03-12 12:36:09,146 | INFO     | mean x: 1773312108.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,146 | INFO     | mean y: 2469584.7255813954
[2026-03-12 08:37:10] 2026-03-12 12:36:09,146 | INFO     | intersect: -20915767682.32814
[2026-03-12 08:37:10] 2026-03-12 12:36:09,147 | INFO     | chi2: 1.5636289427481536
[2026-03-12 08:37:10] 2026-03-12 12:36:09,147 | INFO     | current chi2=1.5636289427481536 (change=33.77569898445873 %)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,148 | INFO     | sum of square deviations: 2871616632.5
[2026-03-12 08:37:10] 2026-03-12 12:36:09,149 | INFO     | sum of deviations: 35216916591.50001
[2026-03-12 08:37:10] 2026-03-12 12:36:09,150 | INFO     | mean x: 1773311955.5
[2026-03-12 08:37:10] 2026-03-12 12:36:09,150 | INFO     | mean y: 2468760.719047619
[2026-03-12 08:37:10] 2026-03-12 12:36:09,150 | INFO     | intersect: -21745064848.314426
[2026-03-12 08:37:10] 2026-03-12 12:36:09,150 | INFO     | chi2: 1.564535802920812
[2026-03-12 08:37:10] 2026-03-12 12:36:09,151 | INFO     | current chi2=1.564535802920812 (change=-0.057997146756867866 %)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,151 | INFO     | right removable region: 209
[2026-03-12 08:37:10] 2026-03-12 12:36:09,151 | INFO     | sum of square deviations: 3081657780.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,153 | INFO     | sum of deviations: -13147691303.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,153 | INFO     | mean x: 1773312413.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,154 | INFO     | mean y: 2484595.618604651
[2026-03-12 08:37:10] 2026-03-12 12:36:09,154 | INFO     | intersect: 7568205987.921303
[2026-03-12 08:37:10] 2026-03-12 12:36:09,154 | INFO     | chi2: 0.848664573888476
[2026-03-12 08:37:10] 2026-03-12 12:36:09,154 | INFO     | current chi2=0.848664573888476 (change=64.05655033243475 %)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,155 | INFO     | sum of square deviations: 2871616632.5
[2026-03-12 08:37:10] 2026-03-12 12:36:09,157 | INFO     | sum of deviations: -13600220077.5
[2026-03-12 08:37:10] 2026-03-12 12:36:09,157 | INFO     | mean x: 1773312565.5
[2026-03-12 08:37:10] 2026-03-12 12:36:09,157 | INFO     | mean y: 2484895.719047619
[2026-03-12 08:37:10] 2026-03-12 12:36:09,157 | INFO     | intersect: 8401043701.9479065
[2026-03-12 08:37:10] 2026-03-12 12:36:09,158 | INFO     | chi2: 0.8384189489629471
[2026-03-12 08:37:10] 2026-03-12 12:36:09,158 | INFO     | current chi2=0.8384189489629471 (change=1.2072643587070866 %)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,158 | INFO     | left removable region: 20
[2026-03-12 08:37:10] 2026-03-12 12:36:09,159 | INFO     | sum of square deviations: 2093397390.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,160 | INFO     | sum of deviations: 4896266381.999997
[2026-03-12 08:37:10] 2026-03-12 12:36:09,160 | INFO     | mean x: 1773312535.0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,161 | INFO     | mean y: 2490966.7195767197
[2026-03-12 08:37:10] 2026-03-12 12:36:09,161 | INFO     | intersect: -4145126008.14428
[2026-03-12 08:37:10] 2026-03-12 12:36:09,161 | INFO     | chi2: 0.007168048769598627
[2026-03-12 08:37:10] 2026-03-12 12:36:09,162 | INFO     | current memory leak: 2.34 B/s (using 189 data points, chi2=0.01)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,162 | INFO     | could have reported an average CPU frequency of 2134 MHz (11 samples)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,162 | INFO     | ..............................
[2026-03-12 08:37:10] 2026-03-12 12:36:09,163 | INFO     | . Timing measurements:
[2026-03-12 08:37:10] 2026-03-12 12:36:09,163 | INFO     | . get job = 0 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,163 | INFO     | . initial setup = 5 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,163 | INFO     | . payload setup = 4 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,163 | INFO     | . stage-in = 0 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,163 | INFO     | . payload execution = 13385 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,164 | INFO     | . stage-out = 2 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,164 | INFO     | . log creation = 0 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,164 | INFO     | ..............................
[2026-03-12 08:37:10] 2026-03-12 12:36:09,413 | INFO     | 
[2026-03-12 08:37:10] 2026-03-12 12:36:09,413 | INFO     | job summary report
[2026-03-12 08:37:10] 2026-03-12 12:36:09,413 | INFO     | --------------------------------------------------
[2026-03-12 08:37:10] 2026-03-12 12:36:09,414 | INFO     | PanDA job id: 7051010778
[2026-03-12 08:37:10] 2026-03-12 12:36:09,414 | INFO     | task id: 48967094
[2026-03-12 08:37:10] 2026-03-12 12:36:09,414 | INFO     | errors: (none)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,414 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:37:10] 2026-03-12 12:36:09,414 | INFO     | pilot state: finished 
[2026-03-12 08:37:10] 2026-03-12 12:36:09,414 | INFO     | transexitcode: 0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,415 | INFO     | exeerrorcode: 0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,415 | INFO     | exeerrordiag: 
[2026-03-12 08:37:10] 2026-03-12 12:36:09,415 | INFO     | exitcode: 0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,415 | INFO     | exitmsg: OK
[2026-03-12 08:37:10] 2026-03-12 12:36:09,415 | INFO     | cpuconsumptiontime: 102300 s
[2026-03-12 08:37:10] 2026-03-12 12:36:09,415 | INFO     | nevents: 400
[2026-03-12 08:37:10] 2026-03-12 12:36:09,416 | INFO     | neventsw: 0
[2026-03-12 08:37:10] 2026-03-12 12:36:09,416 | INFO     | pid: 1089
[2026-03-12 08:37:10] 2026-03-12 12:36:09,416 | INFO     | pgrp: 1089
[2026-03-12 08:37:10] 2026-03-12 12:36:09,416 | INFO     | corecount: 8
[2026-03-12 08:37:10] 2026-03-12 12:36:09,416 | INFO     | event service: False
[2026-03-12 08:37:10] 2026-03-12 12:36:09,416 | INFO     | sizes: {0: 2279789, 1: 2280250, 11: 2280250, 13394: 2310380, 13397: 2319572}
[2026-03-12 08:37:10] 2026-03-12 12:36:09,417 | INFO     | --------------------------------------------------
[2026-03-12 08:37:10] 2026-03-12 12:36:09,417 | INFO     | 
[2026-03-12 08:37:10] 2026-03-12 12:36:09,417 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 08:37:10] 2026-03-12 12:36:09,437 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,438 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,440 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:37:10] 2026-03-12 12:36:09,441 | INFO     | job 7051010778 has completed (purged errors)
[2026-03-12 08:37:10] 2026-03-12 12:36:09,441 | INFO     | overall cleanup function is called
[2026-03-12 08:37:10] 2026-03-12 12:36:10,449 | INFO     | --- collectZombieJob: --- 10, [1089]
[2026-03-12 08:37:10] 2026-03-12 12:36:10,449 | INFO     | zombie collector waiting for pid 1089
[2026-03-12 08:37:10] 2026-03-12 12:36:10,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:37:10] 2026-03-12 12:36:10,449 | INFO     | collected zombie processes
[2026-03-12 08:37:10] 2026-03-12 12:36:10,450 | INFO     | will attempt to kill all subprocesses of pid=1089
[2026-03-12 08:37:10] 2026-03-12 12:36:10,593 | INFO     | process IDs to be killed: [1089] (in reverse order)
[2026-03-12 08:37:10] 2026-03-12 12:36:10,664 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:37:10] 2026-03-12 12:36:10,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:37:10] 2026-03-12 12:36:10,670 | INFO     | did not find any defunct processes belonging to 1089
[2026-03-12 08:37:10] 2026-03-12 12:36:10,675 | INFO     | did not find any defunct processes belonging to 1089
[2026-03-12 08:37:10] 2026-03-12 12:36:10,675 | INFO     | ready for new job
[2026-03-12 08:37:10] 2026-03-12 12:36:10,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:37:10] 2026-03-12 12:36:10,677 | INFO     | **************************************
[2026-03-12 08:37:10] 2026-03-12 12:36:10,678 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 08:37:10] 2026-03-12 12:36:10,678 | INFO     | **************************************
[2026-03-12 08:37:10] 2026-03-12 12:36:10,678 | INFO     | 
[2026-03-12 08:37:10] 2026-03-12 12:36:10,679 | INFO     | architecture information:
[2026-03-12 08:37:10] 2026-03-12 12:36:10,680 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:37:10] 2026-03-12 12:36:10,695 | INFO     | cat /etc/os-release:
[2026-03-12 08:37:10] NAME="CentOS Linux"
[2026-03-12 08:37:10] VERSION="7 (Core)"
[2026-03-12 08:37:10] ID="centos"
[2026-03-12 08:37:10] ID_LIKE="rhel fedora"
[2026-03-12 08:37:10] VERSION_ID="7"
[2026-03-12 08:37:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:37:10] ANSI_COLOR="0;31"
[2026-03-12 08:37:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:37:10] HOME_URL="https://www.centos.org/"
[2026-03-12 08:37:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:37:10] 
[2026-03-12 08:37:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:37:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:37:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:37:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:37:10] 
[2026-03-12 08:37:10] 2026-03-12 12:36:10,696 | INFO     | **************************************
[2026-03-12 08:37:10] 2026-03-12 12:36:11,199 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 08:37:10] 2026-03-12 12:36:11,225 | INFO     | sufficient remaining disk space (28096593920 B)
[2026-03-12 08:37:10] 2026-03-12 12:36:11,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:37:10] 2026-03-12 12:36:11,226 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:37:10] 2026-03-12 12:36:11,226 | INFO     | update_server=False
[2026-03-12 08:37:10] 2026-03-12 12:36:11,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:37:10] 2026-03-12 12:36:11,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:37:10] 2026-03-12 12:36:11,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:37:10] 2026-03-12 12:36:11,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:37:10] 2026-03-12 12:36:11,227 | INFO     | aborting loop
[2026-03-12 08:37:10] 2026-03-12 12:36:11,456 | INFO     | all job control threads have been joined
[2026-03-12 08:37:10] 2026-03-12 12:36:11,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:37:10] 2026-03-12 12:36:12,007 | INFO     | all data control threads have been joined
[2026-03-12 08:37:10] 2026-03-12 12:36:12,053 | INFO     | all payload control threads have been joined
[2026-03-12 08:37:10] 2026-03-12 12:36:12,232 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,232 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,233 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,331 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,461 | INFO     | [job] control thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,475 | INFO     | [job] validate thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,516 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,614 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:12,763 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:13,013 | INFO     | [data] control thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:13,055 | INFO     | [payload] control thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:13,159 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:13,178 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:13,602 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:13,994 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:15,234 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:37:10] 2026-03-12 12:36:41,555 | INFO     | PID=29111 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 08:37:10] 2026-03-12 12:36:41,555 | INFO     | .. there are 3 such processes running
[2026-03-12 08:37:10] 2026-03-12 12:36:41,556 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:37:10] 2026-03-12 12:36:41,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:37:10] 2026-03-12 12:36:41,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:37:10] 2026-03-12 12:37:02,785 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:37:10] 2026-03-12 12:37:04,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957281482560)>', '<ExcThread(monitor, started 139956341176064)>']
[2026-03-12 08:37:10] 2026-03-12 12:37:05,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:37:10] 2026-03-12 12:37:05,666 | INFO     | [monitor] control thread has ended
[2026-03-12 08:37:10] 2026-03-12 12:37:09,848 | INFO     | all workflow threads have been joined
[2026-03-12 08:37:10] 2026-03-12 12:37:09,848 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:37:10] 2026-03-12 12:37:09,848 | INFO     | traces error code: 0
[2026-03-12 08:37:10] 2026-03-12 12:37:09,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:37:10] 2026-03-12 12:37:09,933 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:37:10] 2026-03-12 12:37:09,935 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:37:10] 2026-03-12 12:37:09,937 [wrapper] pilotpid: 29111
[2026-03-12 08:37:10] 2026-03-12 12:37:09,939 [wrapper] Pilot exit status: 0
[2026-03-12 08:37:10] 2026-03-12 12:37:09,947 [wrapper] pandaids: 7051010778
[2026-03-12 08:37:10] 2026-03-12 12:37:09,974 [wrapper] cleanup supervisor_pilot 14875 29112
[2026-03-12 08:37:10] 2026-03-12 12:37:09,977 [wrapper] Test setup, not cleaning
[2026-03-12 08:37:10] 2026-03-12 12:37:09,979 [wrapper] apfmon messages muted
[2026-03-12 08:37:10] 2026-03-12 12:37:09,981 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:37:10] 2026-03-12 12:37:09,983 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:37:10]  *** Error codes and diagnostics ***
[2026-03-12 08:37:10]     "exeErrorCode": 0,
[2026-03-12 08:37:10]     "exeErrorDiag": "",
[2026-03-12 08:37:10]     "pilotErrorCode": 0,
[2026-03-12 08:37:10]     "pilotErrorDiag": "",
[2026-03-12 08:37:10]  *** Listing of results directory ***
[2026-03-12 08:37:10] total 419864
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas    585013 Mar 11 21:25 pilot3.tar.gz
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas      5111 Mar 11 22:14 queuedata.json
[2026-03-12 08:37:10] -rwx------ 1 boincer umatlas     36322 Mar 11 22:15 runpilot2-wrapper.sh
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas       100 Mar 12 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:37:10] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 04:52 run_atlas
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas       105 Mar 12 04:52 job.xml
[2026-03-12 08:37:10] -rw-r--r-- 2 boincer umatlas 218797198 Mar 12 04:52 EVNT.48967092._000281.pool.root.1
[2026-03-12 08:37:10] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 04:52 start_atlas.sh
[2026-03-12 08:37:10] drwxrwx--x 2 boincer umatlas      4096 Mar 12 04:52 shared
[2026-03-12 08:37:10] -rw-r--r-- 2 boincer umatlas    597523 Mar 12 04:52 input.tar.gz
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas         0 Mar 12 04:52 boinc_lockfile
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas      2596 Mar 12 04:52 pandaJob.out
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas        57 Mar 12 04:52 setup.sh.local
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas   1006243 Mar 12 04:52 agis_schedconf.cvmfs.json
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas       444 Mar 12 04:52 workernode_map.json
[2026-03-12 08:37:10] drwx------ 5 boincer umatlas      4096 Mar 12 04:52 pilot3
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas      5952 Mar 12 08:29 init_data.xml
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas 202569021 Mar 12 08:35 HITS.48967094._006707.pool.root.1
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas       531 Mar 12 08:35 boinc_task_state.xml
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas      1054 Mar 12 08:36 memory_monitor_summary.json
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas   1511578 Mar 12 08:36 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas    441183 Mar 12 08:36 log.48967094._006707.job.log.tgz.1
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas      6423 Mar 12 08:36 heartbeat.json
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas        95 Mar 12 08:36 pilot_heartbeat.json
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 08:37 boinc_mmap_file
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas        29 Mar 12 08:37 wrapper_checkpoint.txt
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas      4817 Mar 12 08:37 pilotlog.txt
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas   1879850 Mar 12 08:37 log.48967094._006707.job.log.1
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas       357 Mar 12 08:37 output.list
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas       620 Mar 12 08:37 runtime_log
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas   2334720 Mar 12 08:37 result.tar.gz
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas       662 Mar 12 08:37 U0BLDmwkkK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqviLDmmCQKtm.diag
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas      9337 Mar 12 08:37 runtime_log.err
[2026-03-12 08:37:10] -rw-r--r-- 1 boincer umatlas     21000 Mar 12 08:37 stderr.txt
[2026-03-12 08:37:10] HITS file was successfully produced:
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas 202569021 Mar 12 08:35 shared/HITS.pool.root.1
[2026-03-12 08:37:10]  *** Contents of shared directory: ***
[2026-03-12 08:37:10] total 414380
[2026-03-12 08:37:10] -rw-r--r-- 2 boincer umatlas 218797198 Mar 12 04:52 ATLAS.root_0
[2026-03-12 08:37:10] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 04:52 start_atlas.sh
[2026-03-12 08:37:10] -rw-r--r-- 2 boincer umatlas    597523 Mar 12 04:52 input.tar.gz
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas 202569021 Mar 12 08:35 HITS.pool.root.1
[2026-03-12 08:37:10] -rw------- 1 boincer umatlas   2334720 Mar 12 08:37 result.tar.gz
08:37:11 (25236): run_atlas exited; CPU time 102476.630431
08:37:11 (25236): called boinc_finish(0)

</stderr_txt>
]]>

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