Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:33 (3965737): wrapper (7.7.26015): starting
05:12:33 (3965737): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 05:12:33] Arguments: --nthreads 8
[2026-03-12 05:12:33] Threads: 8
[2026-03-12 05:12:33] Checking for CVMFS
[2026-03-12 05:12:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 05:12:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 05:12:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 05:12:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 05:12:36] 2.13.3.0 12210 111362 230104 157193 0 762 37187787 40960000 53971 16776704 0 979878228 99.749 655403106 42801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 05:12:36] CVMFS is ok
[2026-03-12 05:12:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 05:12:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 05:12:36] Further information can be found at the LHC@home message board.
[2026-03-12 05:12:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 05:12:36] Checking for apptainer binary...
[2026-03-12 05:12:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 05:12:36] Running /usr/bin/apptainer --version
[2026-03-12 05:12:36] apptainer version 1.4.5-2.el9
[2026-03-12 05:12:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 05:12:37] c-208-37.aglt2.org
[2026-03-12 05:12:37] apptainer works
[2026-03-12 05:12:37] Set ATHENA_PROC_NUMBER=8
[2026-03-12 05:12:37] Set ATHENA_CORE_NUMBER=8
[2026-03-12 05:12:37] Starting ATLAS job with PandaID=7050825152
[2026-03-12 05:12:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:27:52]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:27:52] 2026-03-12 12:27:07,667 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,667 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:27:52] 2026-03-12 12:27:07,667 | INFO     | job 7050825152 has finished - writing final server update
[2026-03-12 08:27:52] 2026-03-12 12:27:07,667 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,709 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050825152/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,710 | INFO     | extracted standard info from prmon json
[2026-03-12 08:27:52] 2026-03-12 12:27:07,710 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:27:52] 2026-03-12 12:27:07,710 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:27:52] 2026-03-12 12:27:07,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:27:52] 2026-03-12 12:27:07,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:27:52] 2026-03-12 12:27:07,721 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:27:52] 2026-03-12 12:27:07,721 | INFO     | sum of square deviations: 1963231814.7351365
[2026-03-12 08:27:52] 2026-03-12 12:27:07,722 | INFO     | sum of deviations: 64125863684.22702
[2026-03-12 08:27:52] 2026-03-12 12:27:07,722 | INFO     | mean x: 1773312785.0378377
[2026-03-12 08:27:52] 2026-03-12 12:27:07,722 | INFO     | mean y: 2416883.9675675677
[2026-03-12 08:27:52] 2026-03-12 12:27:07,722 | INFO     | intersect: -57920041925.70433
[2026-03-12 08:27:52] 2026-03-12 12:27:07,722 | INFO     | chi2: 6.057897150109737
[2026-03-12 08:27:52] 2026-03-12 12:27:07,722 | INFO     | sum of square deviations: 1808310114.7277765
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | sum of deviations: 73471026343.21667
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | mean x: 1773312632.538889
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | mean y: 2425839.183333333
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | intersect: -72046664678.47772
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | chi2: 5.422662926460933
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | current chi2=5.422662926460933 (change=10.486051643139847 %)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,733 | INFO     | right removable region: 179
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | sum of square deviations: 1808305844.7277765
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | sum of deviations: 4105035792.7222157
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | mean x: 1773312937.538889
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | mean y: 2475881.611111111
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | intersect: -4023122499.06015
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | chi2: 1.7109464231902514
[2026-03-12 08:27:52] 2026-03-12 12:27:07,734 | INFO     | current chi2=1.7109464231902514 (change=71.75676012988669 %)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,735 | INFO     | sum of square deviations: 1661752124.7200048
[2026-03-12 08:27:52] 2026-03-12 12:27:07,735 | INFO     | sum of deviations: -21345968580.399994
[2026-03-12 08:27:52] 2026-03-12 12:27:07,735 | INFO     | mean x: 1773313090.04
[2026-03-12 08:27:52] 2026-03-12 12:27:07,735 | INFO     | mean y: 2502128.057142857
[2026-03-12 08:27:52] 2026-03-12 12:27:07,735 | INFO     | intersect: 22781522500.655663
[2026-03-12 08:27:52] 2026-03-12 12:27:07,735 | INFO     | chi2: 0.7174090271825772
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | current chi2=0.7174090271825772 (change=58.06946275705772 %)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | sum of square deviations: 1523348766.2882307
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | sum of deviations: -21119093381.78824
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | mean x: 1773313242.535294
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | mean y: 2501865.964705882
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | intersect: 24587002010.023354
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | chi2: 0.7159143252173339
[2026-03-12 08:27:52] 2026-03-12 12:27:07,736 | INFO     | current chi2=0.7159143252173339 (change=0.20834724802854576 %)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,737 | INFO     | left removable region: 30
[2026-03-12 08:27:52] 2026-03-12 12:27:07,737 | INFO     | sum of square deviations: 1025652419.7583911
[2026-03-12 08:27:52] 2026-03-12 12:27:07,745 | INFO     | sum of deviations: -7058518273.020128
[2026-03-12 08:27:52] 2026-03-12 12:27:07,745 | INFO     | mean x: 1773313517.0402684
[2026-03-12 08:27:52] 2026-03-12 12:27:07,745 | INFO     | mean y: 2510067.5033557047
[2026-03-12 08:27:52] 2026-03-12 12:27:07,745 | INFO     | intersect: 12206416208.30971
[2026-03-12 08:27:52] 2026-03-12 12:27:07,745 | INFO     | chi2: 0.009326716882361134
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | current memory leak: -6.88 B/s (using 149 data points, chi2=0.01)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | could have reported an average CPU frequency of 3800 MHz (10 samples)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | ..............................
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . Timing measurements:
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . get job = 0 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . initial setup = 82 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . payload setup = 105 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . stage-in = 0 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . payload execution = 11314 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . stage-out = 4 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | . log creation = 0 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,746 | INFO     | ..............................
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | 
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | job summary report
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | --------------------------------------------------
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | PanDA job id: 7050825152
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | task id: 48967011
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | errors: (none)
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | pilot state: finished 
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | transexitcode: 0
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | exeerrorcode: 0
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | exeerrordiag: 
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | exitcode: 0
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | exitmsg: OK
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | cpuconsumptiontime: 28769 s
[2026-03-12 08:27:52] 2026-03-12 12:27:07,993 | INFO     | nevents: 400
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | neventsw: 0
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | pid: 4029738
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | pgrp: 4029738
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | corecount: 8
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | event service: False
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | sizes: {0: 2279098, 1: 2280156, 2: 2280244, 12: 2280244, 11424: 2309454, 11430: 2318774}
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | --------------------------------------------------
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | 
[2026-03-12 08:27:52] 2026-03-12 12:27:07,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 08:27:52] 2026-03-12 12:27:08,266 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | job 7050825152 has completed (purged errors)
[2026-03-12 08:27:52] 2026-03-12 12:27:08,267 | INFO     | overall cleanup function is called
[2026-03-12 08:27:52] 2026-03-12 12:27:09,274 | INFO     | --- collectZombieJob: --- 10, [4029738]
[2026-03-12 08:27:52] 2026-03-12 12:27:09,274 | INFO     | zombie collector waiting for pid 4029738
[2026-03-12 08:27:52] 2026-03-12 12:27:09,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:27:52] 2026-03-12 12:27:09,274 | INFO     | collected zombie processes
[2026-03-12 08:27:52] 2026-03-12 12:27:09,274 | INFO     | will attempt to kill all subprocesses of pid=4029738
[2026-03-12 08:27:52] 2026-03-12 12:27:10,300 | INFO     | process IDs to be killed: [4029738] (in reverse order)
[2026-03-12 08:27:52] 2026-03-12 12:27:11,488 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:27:52] 2026-03-12 12:27:11,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:27:52] 2026-03-12 12:27:11,546 | INFO     | did not find any defunct processes belonging to 4029738
[2026-03-12 08:27:52] 2026-03-12 12:27:11,695 | INFO     | did not find any defunct processes belonging to 4029738
[2026-03-12 08:27:52] 2026-03-12 12:27:11,695 | INFO     | ready for new job
[2026-03-12 08:27:52] 2026-03-12 12:27:11,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:27:52] 2026-03-12 12:27:11,697 | INFO     | **************************************
[2026-03-12 08:27:52] 2026-03-12 12:27:11,697 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 08:27:52] 2026-03-12 12:27:11,697 | INFO     | **************************************
[2026-03-12 08:27:52] 2026-03-12 12:27:11,697 | INFO     | 
[2026-03-12 08:27:52] 2026-03-12 12:27:11,718 | INFO     | architecture information:
[2026-03-12 08:27:52] 2026-03-12 12:27:11,738 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:27:52] 2026-03-12 12:27:11,868 | INFO     | cat /etc/os-release:
[2026-03-12 08:27:52] NAME="CentOS Linux"
[2026-03-12 08:27:52] VERSION="7 (Core)"
[2026-03-12 08:27:52] ID="centos"
[2026-03-12 08:27:52] ID_LIKE="rhel fedora"
[2026-03-12 08:27:52] VERSION_ID="7"
[2026-03-12 08:27:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:27:52] ANSI_COLOR="0;31"
[2026-03-12 08:27:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:27:52] HOME_URL="https://www.centos.org/"
[2026-03-12 08:27:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:27:52] 
[2026-03-12 08:27:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:27:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:27:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:27:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:27:52] 
[2026-03-12 08:27:52] 2026-03-12 12:27:11,868 | INFO     | **************************************
[2026-03-12 08:27:52] 2026-03-12 12:27:12,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 08:27:52] 2026-03-12 12:27:12,527 | INFO     | sufficient remaining disk space (169079734272 B)
[2026-03-12 08:27:52] 2026-03-12 12:27:12,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:27:52] 2026-03-12 12:27:12,528 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:27:52] 2026-03-12 12:27:12,528 | INFO     | update_server=False
[2026-03-12 08:27:52] 2026-03-12 12:27:12,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:27:52] 2026-03-12 12:27:12,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:27:52] 2026-03-12 12:27:13,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:27:52] 2026-03-12 12:27:13,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:27:52] 2026-03-12 12:27:13,050 | INFO     | aborting loop
[2026-03-12 08:27:52] 2026-03-12 12:27:13,057 | INFO     | all payload control threads have been joined
[2026-03-12 08:27:52] 2026-03-12 12:27:13,461 | INFO     | all job control threads have been joined
[2026-03-12 08:27:52] 2026-03-12 12:27:13,534 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:13,538 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:13,625 | INFO     | all data control threads have been joined
[2026-03-12 08:27:52] 2026-03-12 12:27:13,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:27:52] 2026-03-12 12:27:13,810 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:13,855 | INFO     | [job] validate thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:13,920 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:13,924 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,027 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,058 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,079 | INFO     | [payload] control thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,467 | INFO     | [job] control thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,548 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,631 | INFO     | [data] control thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,782 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:14,853 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:17,731 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:27:52] 2026-03-12 12:27:41,629 | INFO     | PID=3979502 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 08:27:52] 2026-03-12 12:27:41,629 | INFO     | .. there are 67 such processes running
[2026-03-12 08:27:52] 2026-03-12 12:27:41,629 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:27:52] 2026-03-12 12:27:41,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:27:52] 2026-03-12 12:27:41,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:27:52] 2026-03-12 12:27:44,788 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:27:52] 2026-03-12 12:27:45,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555571541824)>', '<ExcThread(monitor, started 140555297507072)>']
[2026-03-12 08:27:52] 2026-03-12 12:27:45,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:27:52] 2026-03-12 12:27:45,656 | INFO     | [monitor] control thread has ended
[2026-03-12 08:27:52] 2026-03-12 12:27:50,627 | INFO     | all workflow threads have been joined
[2026-03-12 08:27:52] 2026-03-12 12:27:50,627 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:27:52] 2026-03-12 12:27:50,627 | INFO     | traces error code: 0
[2026-03-12 08:27:52] 2026-03-12 12:27:50,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:27:52] 2026-03-12 12:27:51,562 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:27:52] 2026-03-12 12:27:51,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:27:52] 2026-03-12 12:27:51,588 [wrapper] pilotpid: 3979502
[2026-03-12 08:27:52] 2026-03-12 12:27:51,608 [wrapper] Pilot exit status: 0
[2026-03-12 08:27:52] 2026-03-12 12:27:51,727 [wrapper] pandaids: 7050825152
[2026-03-12 08:27:52] 2026-03-12 12:27:52,328 [wrapper] cleanup supervisor_pilot 1433288 3979503
[2026-03-12 08:27:52] 2026-03-12 12:27:52,339 [wrapper] Test setup, not cleaning
[2026-03-12 08:27:52] 2026-03-12 12:27:52,395 [wrapper] apfmon messages muted
[2026-03-12 08:27:52] 2026-03-12 12:27:52,404 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:27:52] 2026-03-12 12:27:52,407 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:27:52]  *** Error codes and diagnostics ***
[2026-03-12 08:27:52]     "exeErrorCode": 0,
[2026-03-12 08:27:52]     "exeErrorDiag": "",
[2026-03-12 08:27:52]     "pilotErrorCode": 0,
[2026-03-12 08:27:52]     "pilotErrorDiag": "",
[2026-03-12 08:27:52]  *** Listing of results directory ***
[2026-03-12 08:27:52] total 429372
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 21:25 queuedata.json
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 21:25 pilot3.tar.gz
[2026-03-12 08:27:52] -rwx------. 1 boincer umatlas     36322 Mar 11 21:25 runpilot2-wrapper.sh
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas       100 Mar 12 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:27:52] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 05:12 run_atlas
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas       105 Mar 12 05:12 job.xml
[2026-03-12 08:27:52] -rw-r--r--. 2 boincer umatlas 218487086 Mar 12 05:12 EVNT.48967008._000218.pool.root.1
[2026-03-12 08:27:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 05:12 start_atlas.sh
[2026-03-12 08:27:52] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 05:12 shared
[2026-03-12 08:27:52] -rw-r--r--. 2 boincer umatlas    597526 Mar 12 05:12 input.tar.gz
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas         0 Mar 12 05:12 boinc_lockfile
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas      2561 Mar 12 05:12 pandaJob.out
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas        57 Mar 12 05:12 setup.sh.local
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas       432 Mar 12 05:16 workernode_map.json
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas   1006243 Mar 12 05:16 agis_schedconf.cvmfs.json
[2026-03-12 08:27:52] drwx------. 5 boincer umatlas      4096 Mar 12 05:16 pilot3
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas      7185 Mar 12 08:20 init_data.xml
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas 213667222 Mar 12 08:25 HITS.48967011._014128.pool.root.1
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas       531 Mar 12 08:25 boinc_task_state.xml
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas      1042 Mar 12 08:26 memory_monitor_summary.json
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas   1511578 Mar 12 08:27 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas    409143 Mar 12 08:27 log.48967011._014128.job.log.tgz.1
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas      6350 Mar 12 08:27 heartbeat.json
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas        95 Mar 12 08:27 pilot_heartbeat.json
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 08:27 boinc_mmap_file
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas        28 Mar 12 08:27 wrapper_checkpoint.txt
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas      4821 Mar 12 08:27 pilotlog.txt
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas   1383832 Mar 12 08:27 log.48967011._014128.job.log.1
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas       357 Mar 12 08:27 output.list
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas       620 Mar 12 08:27 runtime_log
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas   1812480 Mar 12 08:27 result.tar.gz
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas      9342 Mar 12 08:27 runtime_log.err
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas       655 Mar 12 08:27 CnsMDmeyjK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmuYlLDm7jPE0m.diag
[2026-03-12 08:27:52] -rw-r--r--. 1 boincer umatlas     21130 Mar 12 08:27 stderr.txt
[2026-03-12 08:27:52] HITS file was successfully produced:
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas 213667222 Mar 12 08:25 shared/HITS.pool.root.1
[2026-03-12 08:27:52]  *** Contents of shared directory: ***
[2026-03-12 08:27:52] total 424404
[2026-03-12 08:27:52] -rw-r--r--. 2 boincer umatlas 218487086 Mar 12 05:12 ATLAS.root_0
[2026-03-12 08:27:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 05:12 start_atlas.sh
[2026-03-12 08:27:52] -rw-r--r--. 2 boincer umatlas    597526 Mar 12 05:12 input.tar.gz
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas 213667222 Mar 12 08:25 HITS.pool.root.1
[2026-03-12 08:27:52] -rw-------. 1 boincer umatlas   1812480 Mar 12 08:27 result.tar.gz
08:27:54 (3965737): run_atlas exited; CPU time 29265.904548
08:27:54 (3965737): called boinc_finish(0)

</stderr_txt>
]]>

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