Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-12 09:12:18 (37372): vboxwrapper version 26210
2026-03-12 09:12:18 (37372): BOINC client version: 8.2.8
2026-03-12 09:12:19 (37372): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-12 09:12:19 (37372): Successfully copied 'init_data.xml' to the shared directory.
2026-03-12 09:12:20 (37372): Create VM. (boinc_abc8402097acc49b, slot#6)
2026-03-12 09:12:20 (37372): Setting Memory Size for VM. (4608MB)
2026-03-12 09:12:20 (37372): Setting CPU Count for VM. (2)
2026-03-12 09:12:21 (37372): Setting Chipset Options for VM.
2026-03-12 09:12:21 (37372): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-12 09:12:21 (37372): Setting Boot Options for VM.
2026-03-12 09:12:22 (37372): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-12 09:12:22 (37372): Enabling VM Network Access.
2026-03-12 09:12:22 (37372): Disabling USB Support for VM.
2026-03-12 09:12:23 (37372): Disabling COM Port Support for VM.
2026-03-12 09:12:23 (37372): Disabling LPT Port Support for VM.
2026-03-12 09:12:23 (37372): Disabling Audio Support for VM.
2026-03-12 09:12:23 (37372): Disabling Clipboard Support for VM.
2026-03-12 09:12:24 (37372): Disabling Drag and Drop Support for VM.
2026-03-12 09:12:24 (37372): Adding storage controller(s) to VM.
2026-03-12 09:12:24 (37372): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-12 09:12:25 (37372): Adding VirtualBox Guest Additions to VM.
2026-03-12 09:12:25 (37372): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-12 09:12:25 (37372): forwarding host port 61208 to guest port 80
2026-03-12 09:12:25 (37372): Enabling remote desktop for VM.
2026-03-12 09:12:26 (37372): Required extension pack not installed, remote desktop not enabled.
2026-03-12 09:12:26 (37372): Enabling shared directory for VM.
2026-03-12 09:12:26 (37372): Starting VM using VBoxManage interface. (boinc_abc8402097acc49b, slot#6)
2026-03-12 09:12:30 (37372): Successfully started VM. (PID = '3696')
2026-03-12 09:12:30 (37372): Reporting VM Process ID to BOINC.
2026-03-12 09:12:30 (37372): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-12 09:12:30 (37372): Guest Log: CPUID EDX: 0x178bfbff
2026-03-12 09:12:30 (37372): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-12 09:12:30 (37372): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-12 09:12:30 (37372): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-12 09:12:30 (37372): Detected: Web Application Enabled (http://localhost:61208)
2026-03-12 09:12:30 (37372): Preference change detected
2026-03-12 09:12:30 (37372): Setting CPU throttle for VM. (100%)
2026-03-12 09:12:31 (37372): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-12 09:12:32 (37372): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-12 09:12:32 (37372): Guest Log: BIOS: Booting from Hard Disk...
2026-03-12 09:12:34 (37372): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-12 09:12:34 (37372): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-12 09:12:34 (37372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-12 09:12:39 (37372): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-12 09:12:39 (37372): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-12 09:12:43 (37372): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000107 main     Log opened 2026-03-12T09:12:41.132203000Z
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000190 main     OS Product: Linux
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000235 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000248 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000248 main     Process ID: 1280
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000249 main     Package type: LINUX_64BITS_GENERIC
2026-03-12 09:12:43 (37372): Guest Log: 00:00:00.000649 main     5.2.32 r132073 started. Verbose level = 0
2026-03-12 09:12:43 (37372): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-12 09:12:43 (37372): Guest Log: [INFO] Mounting shared directory
2026-03-12 09:12:43 (37372): Guest Log: [INFO] Checking for init_data.xml
2026-03-12 09:12:45 (37372): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-12 09:12:45 (37372): Guest Log: [INFO] Detected branch: prod
2026-03-12 09:12:45 (37372): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-12 09:12:45 (37372): Guest Log: Copying input files
2026-03-12 09:12:46 (37372): Guest Log: Copied input files into RunAtlas.
2026-03-12 09:12:46 (37372): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-03-12 09:12:52 (37372): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-12 09:12:52 (37372): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-12 09:12:52 (37372): Guest Log: 2.6.3.0 1552 0 29588 157189 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-03-12 09:12:53 (37372): Guest Log: 00:00:10.002853 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 346 167 000ns (GuestNow=1 773 303 172 788 373 000 ns GuestLast=1 773 306 761 134 540 000 ns fSetTimeLastLoop=true )
2026-03-12 09:12:53 (37372): Guest Log: copied the webapp to /var/www
2026-03-12 09:12:53 (37372): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-12 09:12:53 (37372): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-12 09:12:53 (37372): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-12 09:12:53 (37372): Guest Log:  *** Starting ATLAS job. (PandaID=7037093474 taskID=48878057) ***
2026-03-12 10:52:33 (37372): Status Report: Elapsed Time: '6000.000000'
2026-03-12 10:52:33 (37372): Status Report: CPU Time: '11684.921875'
2026-03-12 12:32:36 (37372): Status Report: Elapsed Time: '12000.000000'
2026-03-12 12:32:36 (37372): Status Report: CPU Time: '23626.703125'
2026-03-12 12:47:32 (37372): Guest Log:  *** Job finished ***
2026-03-12 12:47:32 (37372): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:46:54,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:46:54,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:20,346 | INFO     | [monitor] cgroup control has ended
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:20,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319783089984)>', '<ExcThread(monitor, started 140319131694848)>']
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:20,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:20,863 | INFO     | [monitor] control thread has ended
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,745 | INFO     | all workflow threads have been joined
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,745 | INFO     | end of generic workflow (traces error code: 0)
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,745 | INFO     | traces error code: 0
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,863 [wrapper] ==== pilot stdout END ====
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,867 [wrapper] ==== wrapper stdout RESUME ====
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,871 [wrapper] pilotpid: 5910
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,874 [wrapper] Pilot exit status: 0
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,951 [wrapper] pandaids: 7037093474
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,974 [wrapper] cleanup supervisor_pilot 27591 5911
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,977 [wrapper] Test setup, not cleaning
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,981 [wrapper] apfmon messages muted
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,984 [wrapper] ==== wrapper stdout END ====
2026-03-12 12:47:32 (37372): Guest Log: 2026-03-12 11:47:25,987 [wrapper] ==== wrapper stderr END ====
2026-03-12 12:47:32 (37372): Guest Log:  *** Error codes and diagnostics ***
2026-03-12 12:47:32 (37372): Guest Log:     "exeErrorCode": 0,
2026-03-12 12:47:32 (37372): Guest Log:     "exeErrorDiag": "",
2026-03-12 12:47:32 (37372): Guest Log:     "pilotErrorCode": 0,
2026-03-12 12:47:32 (37372): Guest Log:     "pilotErrorDiag": "",
2026-03-12 12:47:32 (37372): Guest Log:  *** Listing of results directory ***
2026-03-12 12:47:32 (37372): Guest Log: total 215432
2026-03-12 12:47:32 (37372): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  4 01:58 pilot3.tar.gz
2026-03-12 12:47:32 (37372): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  4 01:58 queuedata.json
2026-03-12 12:47:32 (37372): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  4 01:59 runpilot2-wrapper.sh
2026-03-12 12:47:32 (37372): Guest Log: -rwxr-xr-x. 1 atlas atlas      9473 Mar 12 08:12 init_data.xml
2026-03-12 12:47:32 (37372): Guest Log: -rwxr-xr-x. 1 atlas atlas    597957 Mar 12 08:12 input.tar.gz
2026-03-12 12:47:32 (37372): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 12 08:12 start_atlas.sh
2026-03-12 12:47:32 (37372): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 12 08:12 EVNT.48717157._000046.pool.root.1 -> /data/./ATLAS.root_0
2026-03-12 12:47:32 (37372): Guest Log: -rw-r--r--. 1 atlas atlas      2595 Mar 12 08:12 pandaJob.out
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas        50 Mar 12 08:12 setup.sh.local
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas   1006243 Mar 12 08:13 agis_schedconf.cvmfs.json
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas       424 Mar 12 08:13 workernode_map.json
2026-03-12 12:47:32 (37372): Guest Log: drwx------. 5 atlas atlas      4096 Mar 12 08:13 pilot3
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas 212443255 Mar 12 11:45 HITS.48878057._001138.pool.root.1
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas      1028 Mar 12 11:46 memory_monitor_summary.json
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 12 11:46 agis_ddmendpoints.agis.ALL.json
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas    346043 Mar 12 11:46 log.48878057._001138.job.log.tgz.1
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas      6354 Mar 12 11:46 heartbeat.json
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas        95 Mar 12 11:46 pilot_heartbeat.json
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas      4873 Mar 12 11:47 pilotlog.txt
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas   1796237 Mar 12 11:47 log.48878057._001138.job.log.1
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas       357 Mar 12 11:47 output.list
2026-03-12 12:47:32 (37372): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 12 11:47 runtime_log
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas   2160640 Mar 12 11:47 result.tar.gz
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas       655 Mar 12 11:47 UyCMDmYhqH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmU0ILDmcq3SOo.diag
2026-03-12 12:47:32 (37372): Guest Log: -rw-r--r--. 1 atlas atlas      9235 Mar 12 11:47 runtime_log.err
2026-03-12 12:47:32 (37372): Guest Log: Looking for outputfile HITS.48878057._001138.pool.root.1
2026-03-12 12:47:32 (37372): Guest Log: HITS file was successfully produced
2026-03-12 12:47:32 (37372): Guest Log: -rw-------. 1 atlas atlas 212443255 Mar 12 11:45 /home/atlas/RunAtlas/HITS.48878057._001138.pool.root.1
2026-03-12 12:47:33 (37372): Guest Log: Successfully finished the ATLAS job!
2026-03-12 12:47:33 (37372): Guest Log: Copying the results back to the shared directory!
2026-03-12 12:47:33 (37372): Guest Log:  *** Contents of shared directory: ***
2026-03-12 12:47:33 (37372): Guest Log: total 498592
2026-03-12 12:47:33 (37372): Guest Log: -rwxrwxrwx. 1 root root 295318545 Mar 12 08:12 ATLAS.root_0
2026-03-12 12:47:33 (37372): Guest Log: -rwxrwxrwx. 1 root root 212443255 Mar 12  2026 HITS.pool.root.1
2026-03-12 12:47:33 (37372): Guest Log: -rwxrwxrwx. 1 root root      9473 Mar 12 08:12 init_data.xml
2026-03-12 12:47:33 (37372): Guest Log: -rwxrwxrwx. 1 root root    597957 Mar 12 07:56 input.tar.gz
2026-03-12 12:47:33 (37372): Guest Log: -rwxrwxrwx. 1 root root   2160640 Mar 12  2026 result.tar.gz
2026-03-12 12:47:33 (37372): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 12 07:56 start_atlas.sh
2026-03-12 12:47:33 (37372): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-12 12:47:33 (37372): VM Completion File Detected.
2026-03-12 12:47:33 (37372): Powering off VM.
2026-03-12 12:47:33 (37372): Successfully stopped VM.
2026-03-12 12:47:33 (37372): Deregistering VM. (boinc_abc8402097acc49b, slot#6)
2026-03-12 12:47:33 (37372): Removing network bandwidth throttle group from VM.
2026-03-12 12:47:34 (37372): Removing VM from VirtualBox.
2026-03-12 12:47:39 (37372): called boinc_finish(0)

</stderr_txt>
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