Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:54:30 (141967): wrapper (7.7.26015): starting
03:54:30 (141967): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 03:54:30] Arguments: --nthreads 8
[2026-03-12 03:54:30] Threads: 8
[2026-03-12 03:54:30] Checking for CVMFS
[2026-03-12 03:54:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 03:54:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 03:54:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 03:54:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 03:54:32] 2.13.3.0 9597 111664 289572 157188 3 923 27468848 40960001 42257 16776704 0 801705625 99.703 614287566 43733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 03:54:32] CVMFS is ok
[2026-03-12 03:54:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 03:54:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 03:54:32] Further information can be found at the LHC@home message board.
[2026-03-12 03:54:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 03:54:32] Checking for apptainer binary...
[2026-03-12 03:54:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 03:54:32] Running /usr/bin/apptainer --version
[2026-03-12 03:54:32] apptainer version 1.4.5-2.el9
[2026-03-12 03:54:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 03:54:33] c-208-38.aglt2.org
[2026-03-12 03:54:33] apptainer works
[2026-03-12 03:54:33] Set ATHENA_PROC_NUMBER=8
[2026-03-12 03:54:33] Set ATHENA_CORE_NUMBER=8
[2026-03-12 03:54:33] Starting ATLAS job with PandaID=7037108470
[2026-03-12 03:54:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 07:17:01]  *** The last 200 lines of the pilot log: ***
[2026-03-12 07:17:01] 2026-03-12 11:16:25,125 | INFO     | sum of deviations: 1732062801.1562498
[2026-03-12 07:17:01] 2026-03-12 11:16:25,125 | INFO     | mean x: 1773309263.65625
[2026-03-12 07:17:01] 2026-03-12 11:16:25,125 | INFO     | mean y: 2543745.69375
[2026-03-12 07:17:01] 2026-03-12 11:16:25,125 | INFO     | intersect: -2415953863.4213567
[2026-03-12 07:17:01] 2026-03-12 11:16:25,125 | INFO     | chi2: 0.00036773387657921636
[2026-03-12 07:17:01] 2026-03-12 11:16:25,125 | INFO     | current chi2=0.00036773387657921636 (change=36.403777484293116 %)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,129 | INFO     | sum of square deviations: 1154610222.2838676
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | sum of deviations: 1312490915.43871
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | mean x: 1773309416.1548388
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | mean y: 2544300.148387097
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | intersect: -2013246357.2055287
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | chi2: 0.0002649666082285616
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | current chi2=0.0002649666082285616 (change=27.9460976798304 %)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,130 | INFO     | sum of square deviations: 1046433461.9733328
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | sum of deviations: 930152571.28
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | mean x: 1773309568.6533334
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | mean y: 2544838.64
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | intersect: -1573712529.7433136
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | chi2: 0.00015798957049369556
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | current chi2=0.00015798957049369556 (change=40.37378085112788 %)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,131 | INFO     | sum of square deviations: 945243091.9586208
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | sum of deviations: 702273048.289655
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | mean x: 1773309721.1448276
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | mean y: 2545179.9862068966
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | intersect: -1314944081.796806
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | chi2: 0.00011532592230453531
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | current chi2=0.00011532592230453531 (change=27.004091507966155 %)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,132 | INFO     | sum of square deviations: 850787946.1428584
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | sum of deviations: 505815802.857143
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | mean x: 1773309873.642857
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | mean y: 2545497.657142857
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | intersect: -1051733846.0003046
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | chi2: 8.285029924330247e-05
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | current chi2=8.285029924330247e-05 (change=28.159864159140312 %)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,133 | INFO     | sum of square deviations: 762836011.0370387
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | sum of deviations: 366680589.7037038
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | mean x: 1773310026.148148
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | mean y: 2545739.014814815
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | intersect: -849850263.150219
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | chi2: 6.80477595400735e-05
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | current chi2=6.80477595400735e-05 (change=17.86660982328991 %)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | left removable region: 120
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | sum of square deviations: 101844386.63768123
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | sum of deviations: 21614356.304347824
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | mean x: 1773311673.0724638
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | mean y: 2546408.7391304346
[2026-03-12 07:17:01] 2026-03-12 11:16:25,138 | INFO     | intersect: -373802171.735958
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | chi2: 7.080153709336806e-06
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | current memory leak: 0.21 B/s (using 69 data points, chi2=0.00)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | could have reported an average CPU frequency of 3799 MHz (10 samples)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | ..............................
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . Timing measurements:
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . get job = 0 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . initial setup = 46 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . payload setup = 47 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . stage-in = 0 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . payload execution = 11933 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . stage-out = 4 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | . log creation = 0 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,139 | INFO     | ..............................
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | 
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | job summary report
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | --------------------------------------------------
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | PanDA job id: 7037108470
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | task id: 48838586
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | errors: (none)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | pilot state: finished 
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | transexitcode: 0
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | exeerrorcode: 0
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | exeerrordiag: 
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | exitcode: 0
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | exitmsg: OK
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | cpuconsumptiontime: 26343 s
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | nevents: 400
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | neventsw: 0
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | pid: 177500
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | pgrp: 177500
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | corecount: 8
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | event service: False
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | sizes: {0: 2279752, 1: 2280213, 11986: 2309560, 11991: 2318558, 11993: 2318614, 11994: 2318808}
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | --------------------------------------------------
[2026-03-12 07:17:01] 2026-03-12 11:16:25,291 | INFO     | 
[2026-03-12 07:17:01] 2026-03-12 11:16:25,292 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 07:17:01] 2026-03-12 11:16:25,400 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 07:17:01] 2026-03-12 11:16:25,401 | INFO     | job 7037108470 has completed (purged errors)
[2026-03-12 07:17:01] 2026-03-12 11:16:25,402 | INFO     | overall cleanup function is called
[2026-03-12 07:17:01] 2026-03-12 11:16:26,001 | INFO     | PID=153169 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 07:17:01] 2026-03-12 11:16:26,001 | INFO     | .. there are 51 such processes running
[2026-03-12 07:17:01] 2026-03-12 11:16:26,417 | INFO     | --- collectZombieJob: --- 10, [177500]
[2026-03-12 07:17:01] 2026-03-12 11:16:26,418 | INFO     | zombie collector waiting for pid 177500
[2026-03-12 07:17:01] 2026-03-12 11:16:26,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 07:17:01] 2026-03-12 11:16:26,418 | INFO     | collected zombie processes
[2026-03-12 07:17:01] 2026-03-12 11:16:26,418 | INFO     | will attempt to kill all subprocesses of pid=177500
[2026-03-12 07:17:01] 2026-03-12 11:16:28,360 | INFO     | process IDs to be killed: [177500] (in reverse order)
[2026-03-12 07:17:01] 2026-03-12 11:16:28,764 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 07:17:01] 2026-03-12 11:16:28,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 07:17:01] 2026-03-12 11:16:28,870 | INFO     | did not find any defunct processes belonging to 177500
[2026-03-12 07:17:01] 2026-03-12 11:16:29,071 | INFO     | did not find any defunct processes belonging to 177500
[2026-03-12 07:17:01] 2026-03-12 11:16:29,071 | INFO     | ready for new job
[2026-03-12 07:17:01] 2026-03-12 11:16:29,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 07:17:01] 2026-03-12 11:16:29,123 | INFO     | **************************************
[2026-03-12 07:17:01] 2026-03-12 11:16:29,123 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 07:17:01] 2026-03-12 11:16:29,123 | INFO     | **************************************
[2026-03-12 07:17:01] 2026-03-12 11:16:29,123 | INFO     | 
[2026-03-12 07:17:01] 2026-03-12 11:16:29,133 | INFO     | architecture information:
[2026-03-12 07:17:01] 2026-03-12 11:16:29,137 | INFO     | executing command: cat /etc/os-release
[2026-03-12 07:17:01] 2026-03-12 11:16:29,197 | INFO     | cat /etc/os-release:
[2026-03-12 07:17:01] NAME="CentOS Linux"
[2026-03-12 07:17:01] VERSION="7 (Core)"
[2026-03-12 07:17:01] ID="centos"
[2026-03-12 07:17:01] ID_LIKE="rhel fedora"
[2026-03-12 07:17:01] VERSION_ID="7"
[2026-03-12 07:17:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 07:17:01] ANSI_COLOR="0;31"
[2026-03-12 07:17:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 07:17:01] HOME_URL="https://www.centos.org/"
[2026-03-12 07:17:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 07:17:01] 
[2026-03-12 07:17:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 07:17:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 07:17:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 07:17:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 07:17:01] 
[2026-03-12 07:17:01] 2026-03-12 11:16:29,197 | INFO     | **************************************
[2026-03-12 07:17:01] 2026-03-12 11:16:29,701 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 07:17:01] 2026-03-12 11:16:29,790 | INFO     | sufficient remaining disk space (169296789504 B)
[2026-03-12 07:17:01] 2026-03-12 11:16:29,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 07:17:01] 2026-03-12 11:16:29,790 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 07:17:01] 2026-03-12 11:16:29,790 | INFO     | update_server=False
[2026-03-12 07:17:01] 2026-03-12 11:16:29,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 07:17:01] 2026-03-12 11:16:29,968 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 07:17:01] 2026-03-12 11:16:29,968 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 07:17:01] 2026-03-12 11:16:29,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:17:01] 2026-03-12 11:16:29,968 | INFO     | will abort loop
[2026-03-12 07:17:01] 2026-03-12 11:16:30,155 | INFO     | all data control threads have been joined
[2026-03-12 07:17:01] 2026-03-12 11:16:30,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 07:17:01] 2026-03-12 11:16:30,699 | INFO     | all payload control threads have been joined
[2026-03-12 07:17:01] 2026-03-12 11:16:30,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 07:17:01] 2026-03-12 11:16:30,796 | INFO     | [job] retrieve thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:30,960 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:30,974 | INFO     | [job] job monitor thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,051 | INFO     | [data] copytool_in thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,052 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 07:17:01] 2026-03-12 11:16:31,158 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,176 | INFO     | [data] control thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,330 | INFO     | [job] queue monitor thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,411 | INFO     | all job control threads have been joined
[2026-03-12 07:17:01] 2026-03-12 11:16:31,555 | INFO     | [payload] failed_post thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,705 | INFO     | [payload] control thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:31,795 | INFO     | [job] validate thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:32,015 | INFO     | [payload] validate_post thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:32,274 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:32,417 | INFO     | [job] control thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:32,756 | INFO     | [data] copytool_out thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:35,128 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 07:17:01] 2026-03-12 11:16:50,080 | INFO     | [monitor] cgroup control has ended
[2026-03-12 07:17:01] 2026-03-12 11:16:50,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014479517504)>', '<ExcThread(monitor, started 140014121907968)>']
[2026-03-12 07:17:01] 2026-03-12 11:16:55,677 | INFO     | all workflow threads have been joined
[2026-03-12 07:17:01] 2026-03-12 11:16:55,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 07:17:01] 2026-03-12 11:16:55,677 | INFO     | traces error code: 0
[2026-03-12 07:17:01] 2026-03-12 11:16:55,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | INFO     | PID=153169 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | INFO     | .. there are 51 such processes running
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 07:17:01] 2026-03-12 11:16:59,261 | CRITICAL | thread 'MainThread' is not alive
[2026-03-12 07:17:01] 2026-03-12 11:16:59,262 | INFO     | [monitor] control thread has ended
[2026-03-12 07:17:01] 2026-03-12 11:16:59,665 [wrapper] ==== pilot stdout END ====
[2026-03-12 07:17:01] 2026-03-12 11:16:59,716 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 07:17:01] 2026-03-12 11:16:59,732 [wrapper] pilotpid: 153169
[2026-03-12 07:17:01] 2026-03-12 11:16:59,752 [wrapper] Pilot exit status: 0
[2026-03-12 07:17:01] 2026-03-12 11:16:59,902 [wrapper] pandaids: 7037108470
[2026-03-12 07:17:01] 2026-03-12 11:17:00,891 [wrapper] cleanup supervisor_pilot 1132755 153170
[2026-03-12 07:17:01] 2026-03-12 11:17:00,907 [wrapper] Test setup, not cleaning
[2026-03-12 07:17:01] 2026-03-12 11:17:00,943 [wrapper] apfmon messages muted
[2026-03-12 07:17:01] 2026-03-12 11:17:00,961 [wrapper] ==== wrapper stdout END ====
[2026-03-12 07:17:01] 2026-03-12 11:17:00,984 [wrapper] ==== wrapper stderr END ====
[2026-03-12 07:17:01]  *** Error codes and diagnostics ***
[2026-03-12 07:17:01]     "exeErrorCode": 0,
[2026-03-12 07:17:01]     "exeErrorDiag": "",
[2026-03-12 07:17:01]     "pilotErrorCode": 0,
[2026-03-12 07:17:01]     "pilotErrorDiag": "",
[2026-03-12 07:17:01]  *** Listing of results directory ***
[2026-03-12 07:17:01] total 481396
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 21:44 queuedata.json
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 21:44 pilot3.tar.gz
[2026-03-12 07:17:01] -rwx------. 1 boincer umatlas     36322 Mar  3 21:45 runpilot2-wrapper.sh
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas       100 Mar 12 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 07:17:01] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 03:54 run_atlas
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas       105 Mar 12 03:54 job.xml
[2026-03-12 07:17:01] -rw-r--r--. 2 boincer umatlas 276399310 Mar 12 03:54 EVNT.48220221._000198.pool.root.1
[2026-03-12 07:17:01] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 03:54 start_atlas.sh
[2026-03-12 07:17:01] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 03:54 shared
[2026-03-12 07:17:01] -rw-r--r--. 2 boincer umatlas    597956 Mar 12 03:54 input.tar.gz
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas         0 Mar 12 03:54 boinc_lockfile
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas      2562 Mar 12 03:54 pandaJob.out
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas        57 Mar 12 03:54 setup.sh.local
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas   1006243 Mar 12 03:55 agis_schedconf.cvmfs.json
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas       432 Mar 12 03:56 workernode_map.json
[2026-03-12 07:17:01] drwx------. 5 boincer umatlas      4096 Mar 12 03:56 pilot3
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas      7185 Mar 12 07:11 init_data.xml
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas 208753428 Mar 12 07:15 HITS.48838586._004903.pool.root.1
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas       530 Mar 12 07:15 boinc_task_state.xml
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas        95 Mar 12 07:16 pilot_heartbeat.json
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas      1038 Mar 12 07:16 memory_monitor_summary.json
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas   1511578 Mar 12 07:16 agis_ddmendpoints.agis.ALL.json
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas    414383 Mar 12 07:16 log.48838586._004903.job.log.tgz.1
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas      6333 Mar 12 07:16 heartbeat.json
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas        28 Mar 12 07:16 wrapper_checkpoint.txt
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas       892 Mar 12 07:16 pilotlog.txt
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas   1517412 Mar 12 07:17 log.48838586._004903.job.log.1
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas       357 Mar 12 07:17 output.list
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas       620 Mar 12 07:17 runtime_log
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas   1945600 Mar 12 07:17 result.tar.gz
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas       655 Mar 12 07:17 XgDODmgPrH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmv8ILDmAjumTo.diag
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas      9342 Mar 12 07:17 runtime_log.err
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 07:17 boinc_mmap_file
[2026-03-12 07:17:01] -rw-r--r--. 1 boincer umatlas     21176 Mar 12 07:17 stderr.txt
[2026-03-12 07:17:01] HITS file was successfully produced:
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas 208753428 Mar 12 07:15 shared/HITS.pool.root.1
[2026-03-12 07:17:01]  *** Contents of shared directory: ***
[2026-03-12 07:17:01] total 476292
[2026-03-12 07:17:01] -rw-r--r--. 2 boincer umatlas 276399310 Mar 12 03:54 ATLAS.root_0
[2026-03-12 07:17:01] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 03:54 start_atlas.sh
[2026-03-12 07:17:01] -rw-r--r--. 2 boincer umatlas    597956 Mar 12 03:54 input.tar.gz
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas 208753428 Mar 12 07:15 HITS.pool.root.1
[2026-03-12 07:17:01] -rw-------. 1 boincer umatlas   1945600 Mar 12 07:17 result.tar.gz
07:17:03 (141967): run_atlas exited; CPU time 26816.265948
07:17:03 (141967): called boinc_finish(0)

</stderr_txt>
]]>

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