Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:54:45 (5129): wrapper (7.7.26015): starting
23:54:45 (5129): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 23:54:45] Arguments: --nthreads 8
[2026-03-12 23:54:45] Threads: 8
[2026-03-12 23:54:45] Checking for CVMFS
[2026-03-12 23:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 23:54:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 23:54:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 23:54:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 23:54:50] 2.11.2.0 773 125304 133780 157217 0 54 20778387 25165824 4784 130560 153 36819446 99.811 28917284 1058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 23:54:50] CVMFS is ok
[2026-03-12 23:54:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 23:54:50] Checking for apptainer binary...
[2026-03-12 23:54:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 23:54:50] Running /usr/bin/apptainer --version
[2026-03-12 23:54:50] apptainer version 1.3.2-1.el7
[2026-03-12 23:54:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 23:54:58] cg-vwn384.simple-grid.lan
[2026-03-12 23:54:58] apptainer works
[2026-03-12 23:54:58] Set ATHENA_PROC_NUMBER=8
[2026-03-12 23:54:58] Set ATHENA_CORE_NUMBER=8
[2026-03-12 23:54:59] Starting ATLAS job with PandaID=7051439214
[2026-03-12 23:54:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 05:02:29]  *** The last 200 lines of the pilot log: ***
[2026-03-13 05:02:29] 2026-03-13 04:01:40,500 | INFO     | total number of processed events: 400 (read)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,502 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-7051439214/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,503 | INFO     | extracted standard info from prmon json
[2026-03-13 05:02:29] 2026-03-13 04:01:40,503 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 05:02:29] 2026-03-13 04:01:40,503 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 05:02:29] 2026-03-13 04:01:40,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 05:02:29] 2026-03-13 04:01:40,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 05:02:29] 2026-03-13 04:01:40,510 | INFO     | fitting pss+swap vs Time
[2026-03-13 05:02:29] 2026-03-13 04:01:40,510 | INFO     | sum of square deviations: 7799669962.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,513 | INFO     | sum of deviations: 145379727542.00003
[2026-03-13 05:02:29] 2026-03-13 04:01:40,513 | INFO     | mean x: 1773365559.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,513 | INFO     | mean y: 2435547.071672355
[2026-03-13 05:02:29] 2026-03-13 04:01:40,514 | INFO     | intersect: -33051706878.934044
[2026-03-13 05:02:29] 2026-03-13 04:01:40,514 | INFO     | chi2: 6.84784454961086
[2026-03-13 05:02:29] 2026-03-13 04:01:40,515 | INFO     | sum of square deviations: 7407141672.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,517 | INFO     | sum of deviations: 161964376767.49997
[2026-03-13 05:02:29] 2026-03-13 04:01:40,517 | INFO     | mean x: 1773365406.5
[2026-03-13 05:02:29] 2026-03-13 04:01:40,518 | INFO     | mean y: 2441886.045138889
[2026-03-13 05:02:29] 2026-03-13 04:01:40,518 | INFO     | intersect: -38773922272.15032
[2026-03-13 05:02:29] 2026-03-13 04:01:40,518 | INFO     | chi2: 6.116132816099251
[2026-03-13 05:02:29] 2026-03-13 04:01:40,518 | INFO     | current chi2=6.116132816099251 (change=10.685285394704092 %)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,518 | INFO     | right removable region: 287
[2026-03-13 05:02:29] 2026-03-13 04:01:40,519 | INFO     | sum of square deviations: 7407141672.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,522 | INFO     | sum of deviations: 45607058974.50001
[2026-03-13 05:02:29] 2026-03-13 04:01:40,522 | INFO     | mean x: 1773365711.5
[2026-03-13 05:02:29] 2026-03-13 04:01:40,522 | INFO     | mean y: 2474287.871527778
[2026-03-13 05:02:29] 2026-03-13 04:01:40,522 | INFO     | intersect: -10916446689.901375
[2026-03-13 05:02:29] 2026-03-13 04:01:40,522 | INFO     | chi2: 2.2868495277129566
[2026-03-13 05:02:29] 2026-03-13 04:01:40,523 | INFO     | current chi2=2.2868495277129566 (change=66.60482709346972 %)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,523 | INFO     | sum of square deviations: 7028008982.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,526 | INFO     | sum of deviations: -5440545470.000002
[2026-03-13 05:02:29] 2026-03-13 04:01:40,526 | INFO     | mean x: 1773365864.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,526 | INFO     | mean y: 2494719.763250883
[2026-03-13 05:02:29] 2026-03-13 04:01:40,526 | INFO     | intersect: 1375298545.5335805
[2026-03-13 05:02:29] 2026-03-13 04:01:40,527 | INFO     | chi2: 0.8724968308307042
[2026-03-13 05:02:29] 2026-03-13 04:01:40,527 | INFO     | current chi2=0.8724968308307042 (change=61.84721293388835 %)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,527 | INFO     | sum of square deviations: 6662039329.5
[2026-03-13 05:02:29] 2026-03-13 04:01:40,530 | INFO     | sum of deviations: -17557856828.5
[2026-03-13 05:02:29] 2026-03-13 04:01:40,530 | INFO     | mean x: 1773366016.5
[2026-03-13 05:02:29] 2026-03-13 04:01:40,530 | INFO     | mean y: 2499787.356115108
[2026-03-13 05:02:29] 2026-03-13 04:01:40,530 | INFO     | intersect: 4676219812.448076
[2026-03-13 05:02:29] 2026-03-13 04:01:40,531 | INFO     | chi2: 0.7951758766526078
[2026-03-13 05:02:29] 2026-03-13 04:01:40,531 | INFO     | current chi2=0.7951758766526078 (change=8.862032668299676 %)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,531 | INFO     | left removable region: 30
[2026-03-13 05:02:29] 2026-03-13 04:01:40,531 | INFO     | sum of square deviations: 5263458688.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,534 | INFO     | sum of deviations: -2343186412.000001
[2026-03-13 05:02:29] 2026-03-13 04:01:40,534 | INFO     | mean x: 1773366291.0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,534 | INFO     | mean y: 2509113.774319066
[2026-03-13 05:02:29] 2026-03-13 04:01:40,534 | INFO     | intersect: 791976276.5058601
[2026-03-13 05:02:29] 2026-03-13 04:01:40,535 | INFO     | chi2: 0.004421389564843631
[2026-03-13 05:02:29] 2026-03-13 04:01:40,535 | INFO     | current memory leak: -0.45 B/s (using 257 data points, chi2=0.00)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,535 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | ..............................
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | . Timing measurements:
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | . get job = 0 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | . initial setup = 95 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | . payload setup = 135 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | . stage-in = 0 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,536 | INFO     | . payload execution = 17962 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,537 | INFO     | . stage-out = 3 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,537 | INFO     | . log creation = 1 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,537 | INFO     | ..............................
[2026-03-13 05:02:29] 2026-03-13 04:01:40,665 | INFO     | 
[2026-03-13 05:02:29] 2026-03-13 04:01:40,665 | INFO     | job summary report
[2026-03-13 05:02:29] 2026-03-13 04:01:40,665 | INFO     | --------------------------------------------------
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | PanDA job id: 7051439214
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | task id: 48967094
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | errors: (none)
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | pilot state: finished 
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | transexitcode: 0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | exeerrorcode: 0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | exeerrordiag: 
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | exitcode: 0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,666 | INFO     | exitmsg: OK
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | cpuconsumptiontime: 69144 s
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | nevents: 400
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | neventsw: 0
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | pid: 13941
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | pgrp: 13941
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | corecount: 8
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | event service: False
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | sizes: {0: 2279686, 1: 2280203, 2: 2280203, 18101: 2312407, 18105: 2321407, 18106: 2321463, 18110: 2321785}
[2026-03-13 05:02:29] 2026-03-13 04:01:40,667 | INFO     | --------------------------------------------------
[2026-03-13 05:02:29] 2026-03-13 04:01:40,668 | INFO     | 
[2026-03-13 05:02:29] 2026-03-13 04:01:40,668 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-03-13 05:02:29] 2026-03-13 04:01:41,147 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,148 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,148 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,148 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,150 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 05:02:29] 2026-03-13 04:01:41,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,150 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 05:02:29] 2026-03-13 04:01:41,150 | INFO     | job 7051439214 has completed (purged errors)
[2026-03-13 05:02:29] 2026-03-13 04:01:41,150 | INFO     | overall cleanup function is called
[2026-03-13 05:02:29] 2026-03-13 04:01:42,159 | INFO     | --- collectZombieJob: --- 10, [13941]
[2026-03-13 05:02:29] 2026-03-13 04:01:42,159 | INFO     | zombie collector waiting for pid 13941
[2026-03-13 05:02:29] 2026-03-13 04:01:42,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 05:02:29] 2026-03-13 04:01:42,160 | INFO     | collected zombie processes
[2026-03-13 05:02:29] 2026-03-13 04:01:42,160 | INFO     | will attempt to kill all subprocesses of pid=13941
[2026-03-13 05:02:29] 2026-03-13 04:01:42,281 | INFO     | process IDs to be killed: [13941] (in reverse order)
[2026-03-13 05:02:29] 2026-03-13 04:01:42,987 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 05:02:29] 2026-03-13 04:01:42,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 05:02:29] 2026-03-13 04:01:42,990 | INFO     | did not find any defunct processes belonging to 13941
[2026-03-13 05:02:29] 2026-03-13 04:01:42,993 | INFO     | did not find any defunct processes belonging to 13941
[2026-03-13 05:02:29] 2026-03-13 04:01:42,993 | INFO     | ready for new job
[2026-03-13 05:02:29] 2026-03-13 04:01:42,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 05:02:29] 2026-03-13 04:01:42,995 | INFO     | **************************************
[2026-03-13 05:02:29] 2026-03-13 04:01:42,996 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 05:02:29] 2026-03-13 04:01:42,996 | INFO     | **************************************
[2026-03-13 05:02:29] 2026-03-13 04:01:42,996 | INFO     | 
[2026-03-13 05:02:29] 2026-03-13 04:01:42,997 | INFO     | pilot is running in a VM
[2026-03-13 05:02:29] 2026-03-13 04:01:42,997 | INFO     | architecture information:
[2026-03-13 05:02:29] 2026-03-13 04:01:43,004 | INFO     | executing command: cat /etc/os-release
[2026-03-13 05:02:29] 2026-03-13 04:01:43,242 | INFO     | cat /etc/os-release:
[2026-03-13 05:02:29] NAME="CentOS Linux"
[2026-03-13 05:02:29] VERSION="7 (Core)"
[2026-03-13 05:02:29] ID="centos"
[2026-03-13 05:02:29] ID_LIKE="rhel fedora"
[2026-03-13 05:02:29] VERSION_ID="7"
[2026-03-13 05:02:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 05:02:29] ANSI_COLOR="0;31"
[2026-03-13 05:02:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 05:02:29] HOME_URL="https://www.centos.org/"
[2026-03-13 05:02:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 05:02:29] 
[2026-03-13 05:02:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 05:02:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 05:02:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 05:02:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 05:02:29] 
[2026-03-13 05:02:29] 2026-03-13 04:01:43,242 | INFO     | **************************************
[2026-03-13 05:02:29] 2026-03-13 04:01:43,744 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-03-13 05:02:29] 2026-03-13 04:01:44,017 | INFO     | sufficient remaining disk space (495871590400 B)
[2026-03-13 05:02:29] 2026-03-13 04:01:44,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 05:02:29] 2026-03-13 04:01:44,017 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 05:02:29] 2026-03-13 04:01:44,017 | INFO     | update_server=False
[2026-03-13 05:02:29] 2026-03-13 04:01:44,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 05:02:29] 2026-03-13 04:01:44,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 05:02:29] 2026-03-13 04:01:44,341 | INFO     | all job control threads have been joined
[2026-03-13 05:02:29] 2026-03-13 04:01:44,410 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 05:02:29] 2026-03-13 04:01:44,410 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 05:02:29] 2026-03-13 04:01:44,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 05:02:29] 2026-03-13 04:01:44,410 | INFO     | will abort loop
[2026-03-13 05:02:29] 2026-03-13 04:01:44,848 | INFO     | all payload control threads have been joined
[2026-03-13 05:02:29] 2026-03-13 04:01:44,992 | INFO     | all data control threads have been joined
[2026-03-13 05:02:29] 2026-03-13 04:01:45,023 | INFO     | [job] retrieve thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,347 | INFO     | [job] control thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,390 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,416 | INFO     | [job] job monitor thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,425 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,445 | INFO     | [job] validate thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,566 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,575 | INFO     | [payload] failed_post thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 05:02:29] 2026-03-13 04:01:45,768 | INFO     | [payload] validate_post thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,854 | INFO     | [payload] control thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:45,998 | INFO     | [data] control thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:46,028 | INFO     | [data] copytool_out thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:46,366 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:46,410 | INFO     | [data] copytool_in thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:46,686 | INFO     | [job] queue monitor thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:01:47,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 05:02:29] 2026-03-13 04:01:51,477 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 05:02:29] 2026-03-13 04:02:13,652 | INFO     | PID=9230 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 05:02:29] 2026-03-13 04:02:13,652 | INFO     | .. there are 9 such processes running
[2026-03-13 05:02:29] 2026-03-13 04:02:13,652 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 05:02:29] 2026-03-13 04:02:13,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 05:02:29] 2026-03-13 04:02:13,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 05:02:29] 2026-03-13 04:02:19,515 | INFO     | [monitor] cgroup control has ended
[2026-03-13 05:02:29] 2026-03-13 04:02:19,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646240089920)>', '<ExcThread(monitor, started 140645205272320)>']
[2026-03-13 05:02:29] 2026-03-13 04:02:20,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 05:02:29] 2026-03-13 04:02:20,694 | INFO     | [monitor] control thread has ended
[2026-03-13 05:02:29] 2026-03-13 04:02:24,992 | INFO     | all workflow threads have been joined
[2026-03-13 05:02:29] 2026-03-13 04:02:24,992 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 05:02:29] 2026-03-13 04:02:24,993 | INFO     | traces error code: 0
[2026-03-13 05:02:29] 2026-03-13 04:02:24,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 05:02:29] 2026-03-13 04:02:25,288 [wrapper] ==== pilot stdout END ====
[2026-03-13 05:02:29] 2026-03-13 04:02:25,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 05:02:29] 2026-03-13 04:02:25,325 [wrapper] pilotpid: 9230
[2026-03-13 05:02:29] 2026-03-13 04:02:25,425 [wrapper] Pilot exit status: 0
[2026-03-13 05:02:29] 2026-03-13 04:02:25,694 [wrapper] pandaids: 7051439214
[2026-03-13 05:02:29] 2026-03-13 04:02:26,491 [wrapper] cleanup supervisor_pilot 22951 9231
[2026-03-13 05:02:29] 2026-03-13 04:02:26,582 [wrapper] Test setup, not cleaning
[2026-03-13 05:02:29] 2026-03-13 04:02:26,671 [wrapper] apfmon messages muted
[2026-03-13 05:02:29] 2026-03-13 04:02:26,750 [wrapper] ==== wrapper stdout END ====
[2026-03-13 05:02:29] 2026-03-13 04:02:26,866 [wrapper] ==== wrapper stderr END ====
[2026-03-13 05:02:29]  *** Error codes and diagnostics ***
[2026-03-13 05:02:29]     "exeErrorCode": 0,
[2026-03-13 05:02:29]     "exeErrorDiag": "",
[2026-03-13 05:02:29]     "pilotErrorCode": 0,
[2026-03-13 05:02:29]     "pilotErrorDiag": "",
[2026-03-13 05:02:29]  *** Listing of results directory ***
[2026-03-13 05:02:29] total 429528
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc    585013 Mar 12 08:36 pilot3.tar.gz
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc      5111 Mar 12 08:38 queuedata.json
[2026-03-13 05:02:29] -rwx------. 1 boinc boinc     36322 Mar 12 08:38 runpilot2-wrapper.sh
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc       100 Mar 12 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 05:02:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 23:54 run_atlas
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc       105 Mar 12 23:54 job.xml
[2026-03-13 05:02:29] -rw-r--r--. 2 boinc boinc 222296418 Mar 12 23:54 EVNT.48967092._000193.pool.root.1
[2026-03-13 05:02:29] -rw-r--r--. 2 boinc boinc     15845 Mar 12 23:54 start_atlas.sh
[2026-03-13 05:02:29] drwxrwx--x. 2 boinc boinc        68 Mar 12 23:54 shared
[2026-03-13 05:02:29] -rw-r--r--. 2 boinc boinc    597534 Mar 12 23:54 input.tar.gz
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc      6392 Mar 12 23:54 init_data.xml
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc         0 Mar 12 23:54 boinc_lockfile
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc      2597 Mar 12 23:54 pandaJob.out
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc       415 Mar 12 23:59 workernode_map.json
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc   1006498 Mar 12 23:59 agis_schedconf.cvmfs.json
[2026-03-13 05:02:29] drwx------. 5 boinc boinc      4096 Mar 12 23:59 pilot3
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc 207532186 Mar 13 05:00 HITS.48967094._007160.pool.root.1
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc       530 Mar 13 05:00 boinc_task_state.xml
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc        95 Mar 13 05:01 pilot_heartbeat.json
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc      1013 Mar 13 05:01 memory_monitor_summary.json
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc   1511578 Mar 13 05:01 agis_ddmendpoints.agis.ALL.json
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc    515130 Mar 13 05:01 log.48967094._007160.job.log.tgz.1
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc      6314 Mar 13 05:01 heartbeat.json
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc        28 Mar 13 05:02 wrapper_checkpoint.txt
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc      8192 Mar 13 05:02 boinc_mmap_file
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc      5066 Mar 13 05:02 pilotlog.txt
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc   2523845 Mar 13 05:02 log.48967094._007160.job.log.1
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc       357 Mar 13 05:02 output.list
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc       620 Mar 13 05:02 runtime_log
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc   3061760 Mar 13 05:02 result.tar.gz
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc      8832 Mar 13 05:02 runtime_log.err
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc       656 Mar 13 05:02 nfgKDminpK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpcjLDm5Z1kOm.diag
[2026-03-13 05:02:29] -rw-r--r--. 1 boinc boinc     20713 Mar 13 05:02 stderr.txt
[2026-03-13 05:02:29] HITS file was successfully produced:
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc 207532186 Mar 13 05:00 shared/HITS.pool.root.1
[2026-03-13 05:02:29]  *** Contents of shared directory: ***
[2026-03-13 05:02:29] total 423352
[2026-03-13 05:02:29] -rw-r--r--. 2 boinc boinc 222296418 Mar 12 23:54 ATLAS.root_0
[2026-03-13 05:02:29] -rw-r--r--. 2 boinc boinc     15845 Mar 12 23:54 start_atlas.sh
[2026-03-13 05:02:29] -rw-r--r--. 2 boinc boinc    597534 Mar 12 23:54 input.tar.gz
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc 207532186 Mar 13 05:00 HITS.pool.root.1
[2026-03-13 05:02:29] -rw-------. 1 boinc boinc   3061760 Mar 13 05:02 result.tar.gz
05:02:30 (5129): run_atlas exited; CPU time 69423.584982
05:02:30 (5129): called boinc_finish(0)

</stderr_txt>
]]>

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