Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:38:25 (30730): wrapper (7.7.26015): starting
01:38:25 (30730): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 01:38:25] Arguments: --nthreads 8
[2026-03-13 01:38:25] Threads: 8
[2026-03-13 01:38:25] Checking for CVMFS
[2026-03-13 01:38:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 01:38:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 01:38:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 01:38:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 01:38:30] 2.11.2.0 10131 125426 135996 157221 0 54 22069353 25165825 4834 130560 152 38000090 99.808 27630973 1004 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 01:38:30] CVMFS is ok
[2026-03-13 01:38:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 01:38:30] Checking for apptainer binary...
[2026-03-13 01:38:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 01:38:30] Running /usr/bin/apptainer --version
[2026-03-13 01:38:30] apptainer version 1.3.2-1.el7
[2026-03-13 01:38:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 01:38:37] cg-vwn460.simple-grid.lan
[2026-03-13 01:38:37] apptainer works
[2026-03-13 01:38:37] Set ATHENA_PROC_NUMBER=8
[2026-03-13 01:38:37] Set ATHENA_CORE_NUMBER=8
[2026-03-13 01:38:37] Starting ATLAS job with PandaID=7051437234
[2026-03-13 01:38:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 06:26:08]  *** The last 200 lines of the pilot log: ***
[2026-03-13 06:26:08] 2026-03-13 05:25:11,820 | INFO     | job 7051437234 has finished - writing final server update
[2026-03-13 06:26:08] 2026-03-13 05:25:11,820 | INFO     | total number of processed events: 400 (read)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,822 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7051437234/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,822 | INFO     | extracted standard info from prmon json
[2026-03-13 06:26:08] 2026-03-13 05:25:11,823 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 06:26:08] 2026-03-13 05:25:11,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 06:26:08] 2026-03-13 05:25:11,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 06:26:08] 2026-03-13 05:25:11,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 06:26:08] 2026-03-13 05:25:11,829 | INFO     | fitting pss+swap vs Time
[2026-03-13 06:26:08] 2026-03-13 05:25:11,829 | INFO     | sum of square deviations: 6309000152.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,832 | INFO     | sum of deviations: 96325996212.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,832 | INFO     | mean x: 1773371170.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,832 | INFO     | mean y: 2441750.816849817
[2026-03-13 06:26:08] 2026-03-13 05:25:11,832 | INFO     | intersect: -27073440399.818104
[2026-03-13 06:26:08] 2026-03-13 05:25:11,833 | INFO     | chi2: 6.601548817692602
[2026-03-13 06:26:08] 2026-03-13 05:25:11,833 | INFO     | sum of square deviations: 5968658887.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,836 | INFO     | sum of deviations: 112333690022.00002
[2026-03-13 06:26:08] 2026-03-13 05:25:11,836 | INFO     | mean x: 1773371017.5
[2026-03-13 06:26:08] 2026-03-13 05:25:11,836 | INFO     | mean y: 2448803.731343284
[2026-03-13 06:26:08] 2026-03-13 05:25:11,841 | INFO     | intersect: -33373442488.65435
[2026-03-13 06:26:08] 2026-03-13 05:25:11,841 | INFO     | chi2: 5.88402874202369
[2026-03-13 06:26:08] 2026-03-13 05:25:11,841 | INFO     | current chi2=5.88402874202369 (change=10.868965684930007 %)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,841 | INFO     | right removable region: 267
[2026-03-13 06:26:08] 2026-03-13 05:25:11,842 | INFO     | sum of square deviations: 5968658887.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,844 | INFO     | sum of deviations: 3120095161.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,845 | INFO     | mean x: 1773371322.5
[2026-03-13 06:26:08] 2026-03-13 05:25:11,845 | INFO     | mean y: 2483479.8358208956
[2026-03-13 06:26:08] 2026-03-13 05:25:11,845 | INFO     | intersect: -924540058.7416184
[2026-03-13 06:26:08] 2026-03-13 05:25:11,845 | INFO     | chi2: 1.992786059105173
[2026-03-13 06:26:08] 2026-03-13 05:25:11,850 | INFO     | current chi2=1.992786059105173 (change=69.813355711854 %)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,850 | INFO     | sum of square deviations: 5640782972.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,853 | INFO     | sum of deviations: -34897323409.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,853 | INFO     | mean x: 1773371475.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,853 | INFO     | mean y: 2501035.6121673
[2026-03-13 06:26:08] 2026-03-13 05:25:11,853 | INFO     | intersect: 10973658443.114418
[2026-03-13 06:26:08] 2026-03-13 05:25:11,854 | INFO     | chi2: 0.9120893029576111
[2026-03-13 06:26:08] 2026-03-13 05:25:11,854 | INFO     | current chi2=0.9120893029576111 (change=54.230445421363015 %)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,854 | INFO     | sum of square deviations: 5325139844.5
[2026-03-13 06:26:08] 2026-03-13 05:25:11,857 | INFO     | sum of deviations: -31762342936.5
[2026-03-13 06:26:08] 2026-03-13 05:25:11,857 | INFO     | mean x: 1773371627.5
[2026-03-13 06:26:08] 2026-03-13 05:25:11,857 | INFO     | mean y: 2499495.46124031
[2026-03-13 06:26:08] 2026-03-13 05:25:11,857 | INFO     | intersect: 10579956507.165854
[2026-03-13 06:26:08] 2026-03-13 05:25:11,857 | INFO     | chi2: 0.8971879664496163
[2026-03-13 06:26:08] 2026-03-13 05:25:11,858 | INFO     | current chi2=0.8971879664496163 (change=1.633758499269165 %)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,858 | INFO     | left removable region: 30
[2026-03-13 06:26:08] 2026-03-13 05:25:11,858 | INFO     | sum of square deviations: 4127772278.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,860 | INFO     | sum of deviations: 7497756439.999999
[2026-03-13 06:26:08] 2026-03-13 05:25:11,860 | INFO     | mean x: 1773371902.0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,860 | INFO     | mean y: 2496297.0210970463
[2026-03-13 06:26:08] 2026-03-13 05:25:11,861 | INFO     | intersect: -3218686874.7351494
[2026-03-13 06:26:08] 2026-03-13 05:25:11,861 | INFO     | chi2: 0.0007274971024617469
[2026-03-13 06:26:08] 2026-03-13 05:25:11,861 | INFO     | current memory leak: 1.82 B/s (using 237 data points, chi2=0.00)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | ..............................
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | . Timing measurements:
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | . get job = 0 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | . initial setup = 93 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | . payload setup = 127 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,862 | INFO     | . stage-in = 0 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,863 | INFO     | . payload execution = 16749 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,863 | INFO     | . stage-out = 3 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,863 | INFO     | . log creation = 1 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,863 | INFO     | ..............................
[2026-03-13 06:26:08] 2026-03-13 05:25:11,968 | INFO     | 
[2026-03-13 06:26:08] 2026-03-13 05:25:11,968 | INFO     | job summary report
[2026-03-13 06:26:08] 2026-03-13 05:25:11,968 | INFO     | --------------------------------------------------
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | PanDA job id: 7051437234
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | task id: 48967085
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | errors: (none)
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | pilot state: finished 
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | transexitcode: 0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | exeerrorcode: 0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | exeerrordiag: 
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | exitcode: 0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,969 | INFO     | exitmsg: OK
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | cpuconsumptiontime: 64686 s
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | nevents: 400
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | neventsw: 0
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | pid: 6878
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | pgrp: 6878
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | corecount: 8
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | event service: False
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | sizes: {0: 2279152, 1: 2279837, 2: 2280298, 13: 2280298, 16881: 2312146, 16885: 2321172, 16887: 2321356, 16890: 2321550}
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | --------------------------------------------------
[2026-03-13 06:26:08] 2026-03-13 05:25:11,970 | INFO     | 
[2026-03-13 06:26:08] 2026-03-13 05:25:11,971 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-13 06:26:08] 2026-03-13 05:25:12,040 | INFO     | time since job start (16904s) is within the limit (345600.0s)
[2026-03-13 06:26:08] 2026-03-13 05:25:12,484 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,484 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,484 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,484 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | job 7051437234 has completed (purged errors)
[2026-03-13 06:26:08] 2026-03-13 05:25:12,486 | INFO     | overall cleanup function is called
[2026-03-13 06:26:08] 2026-03-13 05:25:13,495 | INFO     | --- collectZombieJob: --- 10, [6878]
[2026-03-13 06:26:08] 2026-03-13 05:25:13,495 | INFO     | zombie collector waiting for pid 6878
[2026-03-13 06:26:08] 2026-03-13 05:25:13,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 06:26:08] 2026-03-13 05:25:13,495 | INFO     | collected zombie processes
[2026-03-13 06:26:08] 2026-03-13 05:25:13,495 | INFO     | will attempt to kill all subprocesses of pid=6878
[2026-03-13 06:26:08] 2026-03-13 05:25:13,626 | INFO     | process IDs to be killed: [6878] (in reverse order)
[2026-03-13 06:26:08] 2026-03-13 05:25:14,328 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 06:26:08] 2026-03-13 05:25:14,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 06:26:08] 2026-03-13 05:25:14,334 | INFO     | did not find any defunct processes belonging to 6878
[2026-03-13 06:26:08] 2026-03-13 05:25:14,338 | INFO     | did not find any defunct processes belonging to 6878
[2026-03-13 06:26:08] 2026-03-13 05:25:14,338 | INFO     | ready for new job
[2026-03-13 06:26:08] 2026-03-13 05:25:14,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 06:26:08] 2026-03-13 05:25:14,340 | INFO     | **************************************
[2026-03-13 06:26:08] 2026-03-13 05:25:14,341 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 06:26:08] 2026-03-13 05:25:14,341 | INFO     | **************************************
[2026-03-13 06:26:08] 2026-03-13 05:25:14,341 | INFO     | 
[2026-03-13 06:26:08] 2026-03-13 05:25:14,341 | INFO     | pilot is running in a VM
[2026-03-13 06:26:08] 2026-03-13 05:25:14,342 | INFO     | architecture information:
[2026-03-13 06:26:08] 2026-03-13 05:25:14,342 | INFO     | executing command: cat /etc/os-release
[2026-03-13 06:26:08] 2026-03-13 05:25:14,448 | INFO     | cat /etc/os-release:
[2026-03-13 06:26:08] NAME="CentOS Linux"
[2026-03-13 06:26:08] VERSION="7 (Core)"
[2026-03-13 06:26:08] ID="centos"
[2026-03-13 06:26:08] ID_LIKE="rhel fedora"
[2026-03-13 06:26:08] VERSION_ID="7"
[2026-03-13 06:26:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 06:26:08] ANSI_COLOR="0;31"
[2026-03-13 06:26:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 06:26:08] HOME_URL="https://www.centos.org/"
[2026-03-13 06:26:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 06:26:08] 
[2026-03-13 06:26:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 06:26:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 06:26:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 06:26:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 06:26:08] 
[2026-03-13 06:26:08] 2026-03-13 05:25:14,448 | INFO     | **************************************
[2026-03-13 06:26:08] 2026-03-13 05:25:14,954 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-13 06:26:08] 2026-03-13 05:25:15,102 | INFO     | sufficient remaining disk space (496305700864 B)
[2026-03-13 06:26:08] 2026-03-13 05:25:15,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 06:26:08] 2026-03-13 05:25:15,103 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 06:26:08] 2026-03-13 05:25:15,103 | INFO     | update_server=False
[2026-03-13 06:26:08] 2026-03-13 05:25:15,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 06:26:08] 2026-03-13 05:25:15,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 06:26:08] 2026-03-13 05:25:15,111 | INFO     | all data control threads have been joined
[2026-03-13 06:26:08] 2026-03-13 05:25:15,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 06:26:08] 2026-03-13 05:25:15,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 06:26:08] 2026-03-13 05:25:15,195 | INFO     | aborting loop
[2026-03-13 06:26:08] 2026-03-13 05:25:15,241 | INFO     | all job control threads have been joined
[2026-03-13 06:26:08] 2026-03-13 05:25:16,109 | INFO     | [job] retrieve thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,117 | INFO     | [data] control thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,200 | INFO     | [payload] failed_post thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,201 | INFO     | [job] job monitor thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,248 | INFO     | [job] control thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,338 | INFO     | [payload] validate_post thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,364 | INFO     | all payload control threads have been joined
[2026-03-13 06:26:08] 2026-03-13 05:25:16,625 | INFO     | [job] validate thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,783 | INFO     | [data] copytool_in thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,967 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,983 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:16,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 06:26:08] 2026-03-13 05:25:17,008 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:17,175 | INFO     | [data] copytool_out thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:17,243 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:17,371 | INFO     | [payload] control thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:17,989 | INFO     | [job] queue monitor thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:19,113 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 06:26:08] 2026-03-13 05:25:45,189 | INFO     | PID=2389 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 06:26:08] 2026-03-13 05:25:45,190 | INFO     | .. there are 9 such processes running
[2026-03-13 06:26:08] 2026-03-13 05:25:45,191 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 06:26:08] 2026-03-13 05:25:45,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 06:26:08] 2026-03-13 05:25:45,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 06:26:08] 2026-03-13 05:25:57,312 | INFO     | [monitor] cgroup control has ended
[2026-03-13 06:26:08] 2026-03-13 05:25:58,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047292106560)>', '<ExcThread(monitor, started 140046871033600)>']
[2026-03-13 06:26:08] 2026-03-13 05:25:58,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 06:26:08] 2026-03-13 05:25:58,269 | INFO     | [monitor] control thread has ended
[2026-03-13 06:26:08] 2026-03-13 05:26:03,186 | INFO     | all workflow threads have been joined
[2026-03-13 06:26:08] 2026-03-13 05:26:03,186 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 06:26:08] 2026-03-13 05:26:03,186 | INFO     | traces error code: 0
[2026-03-13 06:26:08] 2026-03-13 05:26:03,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 06:26:08] 2026-03-13 05:26:03,540 [wrapper] ==== pilot stdout END ====
[2026-03-13 06:26:08] 2026-03-13 05:26:03,615 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 06:26:08] 2026-03-13 05:26:03,663 [wrapper] pilotpid: 2389
[2026-03-13 06:26:08] 2026-03-13 05:26:03,738 [wrapper] Pilot exit status: 0
[2026-03-13 06:26:08] 2026-03-13 05:26:04,115 [wrapper] pandaids: 7051437234
[2026-03-13 06:26:08] 2026-03-13 05:26:05,191 [wrapper] cleanup supervisor_pilot 15237 2390
[2026-03-13 06:26:08] 2026-03-13 05:26:05,290 [wrapper] Test setup, not cleaning
[2026-03-13 06:26:08] 2026-03-13 05:26:05,385 [wrapper] apfmon messages muted
[2026-03-13 06:26:08] 2026-03-13 05:26:05,482 [wrapper] ==== wrapper stdout END ====
[2026-03-13 06:26:08] 2026-03-13 05:26:05,612 [wrapper] ==== wrapper stderr END ====
[2026-03-13 06:26:08]  *** Error codes and diagnostics ***
[2026-03-13 06:26:08]     "exeErrorCode": 0,
[2026-03-13 06:26:08]     "exeErrorDiag": "",
[2026-03-13 06:26:08]     "pilotErrorCode": 0,
[2026-03-13 06:26:08]     "pilotErrorDiag": "",
[2026-03-13 06:26:08]  *** Listing of results directory ***
[2026-03-13 06:26:08] total 408864
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc    585013 Mar 12 08:36 pilot3.tar.gz
[2026-03-13 06:26:08] -rwx------. 1 boinc boinc     36322 Mar 12 08:38 runpilot2-wrapper.sh
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc      5111 Mar 12 08:38 queuedata.json
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc       100 Mar 13 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 06:26:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 01:38 run_atlas
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc       105 Mar 13 01:38 job.xml
[2026-03-13 06:26:08] -rw-r--r--. 2 boinc boinc 211521022 Mar 13 01:38 EVNT.48967083._000610.pool.root.1
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc      6391 Mar 13 01:38 init_data.xml
[2026-03-13 06:26:08] -rw-r--r--. 2 boinc boinc     15845 Mar 13 01:38 start_atlas.sh
[2026-03-13 06:26:08] drwxrwx--x. 2 boinc boinc        68 Mar 13 01:38 shared
[2026-03-13 06:26:08] -rw-r--r--. 2 boinc boinc    597510 Mar 13 01:38 input.tar.gz
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc         0 Mar 13 01:38 boinc_lockfile
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc      2563 Mar 13 01:38 pandaJob.out
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc       413 Mar 13 01:43 workernode_map.json
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc   1006522 Mar 13 01:43 agis_schedconf.cvmfs.json
[2026-03-13 06:26:08] drwx------. 5 boinc boinc      4096 Mar 13 01:43 pilot3
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc 197538810 Mar 13 06:23 HITS.48967085._014994.pool.root.1
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc       531 Mar 13 06:24 boinc_task_state.xml
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc      1012 Mar 13 06:24 memory_monitor_summary.json
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc   1511578 Mar 13 06:25 agis_ddmendpoints.agis.ALL.json
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc    492765 Mar 13 06:25 log.48967085._014994.job.log.tgz.1
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc      6312 Mar 13 06:25 heartbeat.json
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc        95 Mar 13 06:25 pilot_heartbeat.json
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc      4879 Mar 13 06:26 pilotlog.txt
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc   2352679 Mar 13 06:26 log.48967085._014994.job.log.1
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc       357 Mar 13 06:26 output.list
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc       620 Mar 13 06:26 runtime_log
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc   2867200 Mar 13 06:26 result.tar.gz
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc      8192 Mar 13 06:26 boinc_mmap_file
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc      8816 Mar 13 06:26 runtime_log.err
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc       655 Mar 13 06:26 NpOLDmYnpK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXLmLDmnaR2Dn.diag
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc        28 Mar 13 06:26 wrapper_checkpoint.txt
[2026-03-13 06:26:08] -rw-r--r--. 1 boinc boinc     20708 Mar 13 06:26 stderr.txt
[2026-03-13 06:26:08] HITS file was successfully produced:
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc 197538810 Mar 13 06:23 shared/HITS.pool.root.1
[2026-03-13 06:26:08]  *** Contents of shared directory: ***
[2026-03-13 06:26:08] total 402876
[2026-03-13 06:26:08] -rw-r--r--. 2 boinc boinc 211521022 Mar 13 01:38 ATLAS.root_0
[2026-03-13 06:26:08] -rw-r--r--. 2 boinc boinc     15845 Mar 13 01:38 start_atlas.sh
[2026-03-13 06:26:08] -rw-r--r--. 2 boinc boinc    597510 Mar 13 01:38 input.tar.gz
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc 197538810 Mar 13 06:23 HITS.pool.root.1
[2026-03-13 06:26:08] -rw-------. 1 boinc boinc   2867200 Mar 13 06:26 result.tar.gz
06:26:10 (30730): run_atlas exited; CPU time 64935.743457
06:26:10 (30730): called boinc_finish(0)

</stderr_txt>
]]>

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