Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:16:31 (4072136): wrapper (7.7.26015): starting
12:16:31 (4072136): wrapper: running run_atlas (--nthreads 3)
[2026-03-13 12:16:31] Arguments: --nthreads 3
[2026-03-13 12:16:31] Threads: 3
[2026-03-13 12:16:31] Checking for CVMFS
[2026-03-13 12:16:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 12:16:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 12:16:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 12:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 12:16:53] 2.9.2.0 49769 22740 45412 157238 3 9 22359206 36864000 0 130560 0 8927493 99.982 856940 12533 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 12:16:53] CVMFS is ok
[2026-03-13 12:16:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 12:16:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 12:16:53] Further information can be found at the LHC@home message board.
[2026-03-13 12:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 12:16:53] Checking for apptainer binary...
[2026-03-13 12:16:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 12:16:53] Running /usr/bin/apptainer --version
[2026-03-13 12:16:53] apptainer version 1.4.1-1.1
[2026-03-13 12:16:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 12:16:53] cosA121a
[2026-03-13 12:16:53] apptainer works
[2026-03-13 12:16:53] Set ATHENA_PROC_NUMBER=3
[2026-03-13 12:16:53] Set ATHENA_CORE_NUMBER=3
[2026-03-13 12:16:53] Starting ATLAS job with PandaID=7037107959
[2026-03-13 12:16:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 13:51:38]  *** The last 200 lines of the pilot log: ***
[2026-03-13 13:51:38] VERSION="7 (Core)"
[2026-03-13 13:51:38] ID="centos"
[2026-03-13 13:51:38] ID_LIKE="rhel fedora"
[2026-03-13 13:51:38] VERSION_ID="7"
[2026-03-13 13:51:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 13:51:38] ANSI_COLOR="0;31"
[2026-03-13 13:51:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 13:51:38] HOME_URL="https://www.centos.org/"
[2026-03-13 13:51:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 13:51:38] 
[2026-03-13 13:51:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 13:51:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 13:51:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 13:51:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 13:51:38] 
[2026-03-13 13:51:38] 2026-03-13 12:51:06,964 | INFO     | **************************************
[2026-03-13 13:51:38] 2026-03-13 12:51:07,465 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 13:51:38] 2026-03-13 12:51:07,478 | INFO     | sufficient remaining disk space (334292320256 B)
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | INFO     | update_server=False
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | INFO     | aborting loop
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 13:51:38] 2026-03-13 12:51:07,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 13:51:38] 2026-03-13 12:51:08,110 | INFO     | all job control threads have been joined
[2026-03-13 13:51:38] 2026-03-13 12:51:08,332 | INFO     | all data control threads have been joined
[2026-03-13 13:51:38] 2026-03-13 12:51:08,480 | INFO     | [job] retrieve thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:08,484 | INFO     | [job] job monitor thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:08,485 | INFO     | [job] queue monitor thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:08,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:08,605 | INFO     | all payload control threads have been joined
[2026-03-13 13:51:38] 2026-03-13 12:51:09,116 | INFO     | [job] control thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,126 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,158 | INFO     | [job] validate thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,163 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,334 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,338 | INFO     | [data] control thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,365 | INFO     | [payload] failed_post thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,439 | INFO     | [data] copytool_in thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,485 | INFO     | [data] copytool_out thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,611 | INFO     | [payload] control thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:09,897 | INFO     | [payload] validate_post thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:10,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 13:51:38] 2026-03-13 12:51:10,683 | INFO     | [monitor] cgroup control has ended
[2026-03-13 13:51:38] 2026-03-13 12:51:14,096 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 13:51:38] 2026-03-13 12:51:14,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531733485376)>', '<ExcThread(monitor, started 140531086632704)>']
[2026-03-13 13:51:38] 2026-03-13 12:51:19,935 | INFO     | all workflow threads have been joined
[2026-03-13 13:51:38] 2026-03-13 12:51:19,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 13:51:38] 2026-03-13 12:51:19,936 | INFO     | traces error code: 0
[2026-03-13 13:51:38] 2026-03-13 12:51:19,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 13:51:38] 2026-03-13 12:51:38,393 | INFO     | PID=4076212 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 13:51:38] 2026-03-13 12:51:38,393 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 13:51:38] 2026-03-13 12:51:38,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 13:51:38] 2026-03-13 12:51:38,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 13:51:38] 2026-03-13 12:51:38,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 13:51:38] 2026-03-13 12:51:38,393 | INFO     | [monitor] control thread has ended
[2026-03-13 13:51:38] 2026-03-13 12:51:38,441 [wrapper] ==== pilot stdout END ====
[2026-03-13 13:51:38] 2026-03-13 12:51:38,443 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 13:51:38] 2026-03-13 12:51:38,446 [wrapper] pilotpid: 4076212
[2026-03-13 13:51:38] 2026-03-13 12:51:38,448 [wrapper] Pilot exit status: 0
[2026-03-13 13:51:38] 2026-03-13 12:51:38,455 [wrapper] pandaids: 7037107959
[2026-03-13 13:51:38] 2026-03-13 12:51:38,475 [wrapper] cleanup supervisor_pilot 4091955 4076213
[2026-03-13 13:51:38] 2026-03-13 12:51:38,478 [wrapper] Test setup, not cleaning
[2026-03-13 13:51:38] 2026-03-13 12:51:38,480 [wrapper] apfmon messages muted
[2026-03-13 13:51:38] 2026-03-13 12:51:38,482 [wrapper] ==== wrapper stdout END ====
[2026-03-13 13:51:38] 2026-03-13 12:51:38,484 [wrapper] ==== wrapper stderr END ====
[2026-03-13 13:51:38]  *** Error codes and diagnostics ***
[2026-03-13 13:51:38]     "exeErrorCode": 0,
[2026-03-13 13:51:38]     "exeErrorDiag": "",
[2026-03-13 13:51:38]     "pilotErrorCode": 0,
[2026-03-13 13:51:38]     "pilotErrorDiag": "",
[2026-03-13 13:51:38]  *** Listing of results directory ***
[2026-03-13 13:51:38] total 479532
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc      5111 Mar  4 03:44 queuedata.json
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc    584627 Mar  4 03:44 pilot3.tar.gz
[2026-03-13 13:51:38] -rwx------ 1 boinc boinc     36322 Mar  4 03:45 runpilot2-wrapper.sh
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc       100 Mar 13 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 13:51:38] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 12:16 run_atlas
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc       105 Mar 13 12:16 job.xml
[2026-03-13 13:51:38] -rw-r--r-- 2 boinc boinc 278880184 Mar 13 12:16 EVNT.48220221._000192.pool.root.1
[2026-03-13 13:51:38] drwxrwx--x 2 boinc boinc      4096 Mar 13 12:16 shared
[2026-03-13 13:51:38] -rw-r--r-- 2 boinc boinc    597959 Mar 13 12:16 input.tar.gz
[2026-03-13 13:51:38] -rw-r--r-- 2 boinc boinc     15845 Mar 13 12:16 start_atlas.sh
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc         0 Mar 13 12:16 boinc_setup_complete
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc      6440 Mar 13 12:16 init_data.xml
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc         0 Mar 13 12:16 boinc_lockfile
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc      2562 Mar 13 12:16 pandaJob.out
[2026-03-13 13:51:38] -rw------- 1 boinc boinc   1006495 Mar 13 12:17 agis_schedconf.cvmfs.json
[2026-03-13 13:51:38] -rw------- 1 boinc boinc   1511578 Mar 13 12:17 agis_ddmendpoints.agis.ALL.json
[2026-03-13 13:51:38] -rw------- 1 boinc boinc       429 Mar 13 12:17 workernode_map.json
[2026-03-13 13:51:38] drwx------ 5 boinc boinc      4096 Mar 13 12:17 pilot3
[2026-03-13 13:51:38] -rw------- 1 boinc boinc 206062108 Mar 13 13:50 HITS.48838586._004762.pool.root.1
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc       529 Mar 13 13:50 boinc_task_state.xml
[2026-03-13 13:51:38] -rw------- 1 boinc boinc      1022 Mar 13 13:50 memory_monitor_summary.json
[2026-03-13 13:51:38] -rw------- 1 boinc boinc    267391 Mar 13 13:51 log.48838586._004762.job.log.tgz.1
[2026-03-13 13:51:38] -rw------- 1 boinc boinc      6321 Mar 13 13:51 heartbeat.json
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc        27 Mar 13 13:51 wrapper_checkpoint.txt
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc      8192 Mar 13 13:51 boinc_mmap_file
[2026-03-13 13:51:38] -rw------- 1 boinc boinc       747 Mar 13 13:51 pilotlog.txt
[2026-03-13 13:51:38] -rw------- 1 boinc boinc        95 Mar 13 13:51 pilot_heartbeat.json
[2026-03-13 13:51:38] -rw------- 1 boinc boinc    820889 Mar 13 13:51 log.48838586._004762.job.log.1
[2026-03-13 13:51:38] -rw------- 1 boinc boinc       357 Mar 13 13:51 output.list
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc       620 Mar 13 13:51 runtime_log
[2026-03-13 13:51:38] -rw------- 1 boinc boinc   1105920 Mar 13 13:51 result.tar.gz
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc      8906 Mar 13 13:51 runtime_log.err
[2026-03-13 13:51:38] -rw------- 1 boinc boinc       660 Mar 13 13:51 rYcNDmXPrH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHAHLDmjNYg1n.diag
[2026-03-13 13:51:38] -rw-r--r-- 1 boinc boinc      8665 Mar 13 13:51 stderr.txt
[2026-03-13 13:51:38] HITS file was successfully produced:
[2026-03-13 13:51:38] -rw------- 1 boinc boinc 206062108 Mar 13 13:50 shared/HITS.pool.root.1
[2026-03-13 13:51:38]  *** Contents of shared directory: ***
[2026-03-13 13:51:38] total 475268
[2026-03-13 13:51:38] -rw-r--r-- 2 boinc boinc 278880184 Mar 13 12:16 ATLAS.root_0
[2026-03-13 13:51:38] -rw-r--r-- 2 boinc boinc    597959 Mar 13 12:16 input.tar.gz
[2026-03-13 13:51:38] -rw-r--r-- 2 boinc boinc     15845 Mar 13 12:16 start_atlas.sh
[2026-03-13 13:51:38] -rw------- 1 boinc boinc 206062108 Mar 13 13:50 HITS.pool.root.1
[2026-03-13 13:51:38] -rw------- 1 boinc boinc   1105920 Mar 13 13:51 result.tar.gz
13:51:39 (4072136): run_atlas exited; CPU time 16259.643034
13:51:39 (4072136): called boinc_finish(0)

</stderr_txt>
]]>

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