Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:56 (1198626): wrapper (7.7.26015): starting
21:38:56 (1198626): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 21:38:56] Arguments: --nthreads 4
[2026-03-12 21:38:56] Threads: 4
[2026-03-12 21:38:56] Checking for CVMFS
[2026-03-12 21:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 21:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 21:38:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 21:38:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 21:38:57] 2.9.2.0 3142 6686 100272 157214 3 50 30581587 36864001 0 130560 0 3353069 99.986 257694 4116 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 21:38:57] CVMFS is ok
[2026-03-12 21:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 21:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 21:38:57] Further information can be found at the LHC@home message board.
[2026-03-12 21:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 21:38:57] Checking for apptainer binary...
[2026-03-12 21:38:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 21:38:57] Running /usr/bin/apptainer --version
[2026-03-12 21:38:57] apptainer version 1.4.1-1.1
[2026-03-12 21:38:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 21:38:57] belleA253c
[2026-03-12 21:38:57] apptainer works
[2026-03-12 21:38:57] Set ATHENA_PROC_NUMBER=4
[2026-03-12 21:38:57] Set ATHENA_CORE_NUMBER=4
[2026-03-12 21:38:57] Starting ATLAS job with PandaID=7037107211
[2026-03-12 21:38:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 23:00:35]  *** The last 200 lines of the pilot log: ***
[2026-03-12 23:00:35] 2026-03-12 22:00:02,997 | INFO     | overall cleanup function is called
[2026-03-12 23:00:35] 2026-03-12 22:00:04,004 | INFO     | --- collectZombieJob: --- 10, [1207269]
[2026-03-12 23:00:35] 2026-03-12 22:00:04,004 | INFO     | zombie collector waiting for pid 1207269
[2026-03-12 23:00:35] 2026-03-12 22:00:04,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 23:00:35] 2026-03-12 22:00:04,004 | INFO     | collected zombie processes
[2026-03-12 23:00:35] 2026-03-12 22:00:04,004 | INFO     | will attempt to kill all subprocesses of pid=1207269
[2026-03-12 23:00:35] 2026-03-12 22:00:04,046 | INFO     | process IDs to be killed: [1207269] (in reverse order)
[2026-03-12 23:00:35] 2026-03-12 22:00:04,079 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 23:00:35] 2026-03-12 22:00:04,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 23:00:35] 2026-03-12 22:00:04,081 | INFO     | did not find any defunct processes belonging to 1207269
[2026-03-12 23:00:35] 2026-03-12 22:00:04,082 | INFO     | did not find any defunct processes belonging to 1207269
[2026-03-12 23:00:35] 2026-03-12 22:00:04,082 | INFO     | ready for new job
[2026-03-12 23:00:35] 2026-03-12 22:00:04,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 23:00:35] 2026-03-12 22:00:04,083 | INFO     | **************************************
[2026-03-12 23:00:35] 2026-03-12 22:00:04,083 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 23:00:35] 2026-03-12 22:00:04,083 | INFO     | **************************************
[2026-03-12 23:00:35] 2026-03-12 22:00:04,083 | INFO     | 
[2026-03-12 23:00:35] 2026-03-12 22:00:04,084 | INFO     | architecture information:
[2026-03-12 23:00:35] 2026-03-12 22:00:04,084 | INFO     | executing command: cat /etc/os-release
[2026-03-12 23:00:35] 2026-03-12 22:00:04,099 | INFO     | cat /etc/os-release:
[2026-03-12 23:00:35] NAME="CentOS Linux"
[2026-03-12 23:00:35] VERSION="7 (Core)"
[2026-03-12 23:00:35] ID="centos"
[2026-03-12 23:00:35] ID_LIKE="rhel fedora"
[2026-03-12 23:00:35] VERSION_ID="7"
[2026-03-12 23:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 23:00:35] ANSI_COLOR="0;31"
[2026-03-12 23:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 23:00:35] HOME_URL="https://www.centos.org/"
[2026-03-12 23:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 23:00:35] 
[2026-03-12 23:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 23:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 23:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 23:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 23:00:35] 
[2026-03-12 23:00:35] 2026-03-12 22:00:04,100 | INFO     | **************************************
[2026-03-12 23:00:35] 2026-03-12 22:00:04,603 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | INFO     | sufficient remaining disk space (328103624704 B)
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | INFO     | update_server=False
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 23:00:35] 2026-03-12 22:00:04,622 | INFO     | aborting loop
[2026-03-12 23:00:35] 2026-03-12 22:00:05,139 | INFO     | all data control threads have been joined
[2026-03-12 23:00:35] 2026-03-12 22:00:05,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 23:00:35] 2026-03-12 22:00:05,627 | INFO     | [job] queue monitor thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:05,627 | INFO     | [job] retrieve thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:05,628 | INFO     | [job] job monitor thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:05,771 | INFO     | all job control threads have been joined
[2026-03-12 23:00:35] 2026-03-12 22:00:05,841 | INFO     | all payload control threads have been joined
[2026-03-12 23:00:35] 2026-03-12 22:00:05,868 | INFO     | job.realtimelogging is not enabled
[2026-03-12 23:00:35] 2026-03-12 22:00:06,145 | INFO     | [data] control thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,285 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,603 | INFO     | [job] validate thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,619 | INFO     | [payload] validate_post thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,730 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,777 | INFO     | [job] control thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,800 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,847 | INFO     | [payload] control thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:06,874 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:07,034 | INFO     | [data] copytool_in thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:07,099 | INFO     | [payload] failed_post thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:07,214 | INFO     | [data] copytool_out thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:08,629 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 23:00:35] 2026-03-12 22:00:16,030 | INFO     | [monitor] cgroup control has ended
[2026-03-12 23:00:35] 2026-03-12 22:00:16,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140382394844992)>', '<ExcThread(monitor, started 140381601654528)>']
[2026-03-12 23:00:35] 2026-03-12 22:00:21,224 | INFO     | all workflow threads have been joined
[2026-03-12 23:00:35] 2026-03-12 22:00:21,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 23:00:35] 2026-03-12 22:00:21,224 | INFO     | traces error code: 0
[2026-03-12 23:00:35] 2026-03-12 22:00:21,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 23:00:35] 2026-03-12 22:00:35,195 | INFO     | PID=1202739 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 23:00:35] 2026-03-12 22:00:35,195 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 23:00:35] 2026-03-12 22:00:35,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 23:00:35] 2026-03-12 22:00:35,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 23:00:35] 2026-03-12 22:00:35,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 23:00:35] 2026-03-12 22:00:35,195 | INFO     | [monitor] control thread has ended
[2026-03-12 23:00:35] 2026-03-12 22:00:35,271 [wrapper] ==== pilot stdout END ====
[2026-03-12 23:00:35] 2026-03-12 22:00:35,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 23:00:35] 2026-03-12 22:00:35,280 [wrapper] pilotpid: 1202739
[2026-03-12 23:00:35] 2026-03-12 22:00:35,284 [wrapper] Pilot exit status: 0
[2026-03-12 23:00:35] 2026-03-12 22:00:35,296 [wrapper] pandaids: 7037107211
[2026-03-12 23:00:35] 2026-03-12 22:00:35,318 [wrapper] cleanup supervisor_pilot 1212432 1202740
[2026-03-12 23:00:35] 2026-03-12 22:00:35,322 [wrapper] Test setup, not cleaning
[2026-03-12 23:00:35] 2026-03-12 22:00:35,326 [wrapper] apfmon messages muted
[2026-03-12 23:00:35] 2026-03-12 22:00:35,330 [wrapper] ==== wrapper stdout END ====
[2026-03-12 23:00:35] 2026-03-12 22:00:35,334 [wrapper] ==== wrapper stderr END ====
[2026-03-12 23:00:35]  *** Error codes and diagnostics ***
[2026-03-12 23:00:35]     "exeErrorCode": 0,
[2026-03-12 23:00:35]     "exeErrorDiag": "",
[2026-03-12 23:00:35]     "pilotErrorCode": 0,
[2026-03-12 23:00:35]     "pilotErrorDiag": "",
[2026-03-12 23:00:35]  *** Listing of results directory ***
[2026-03-12 23:00:35] total 482996
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc    584627 Mar  4 03:44 pilot3.tar.gz
[2026-03-12 23:00:35] -rwx------ 1 boinc boinc     36322 Mar  4 03:46 runpilot2-wrapper.sh
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc      5111 Mar  4 03:47 queuedata.json
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc       100 Mar 12 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 23:00:35] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 21:38 run_atlas
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc       105 Mar 12 21:38 job.xml
[2026-03-12 23:00:35] -rw-r--r-- 2 boinc boinc 276643871 Mar 12 21:38 EVNT.48220221._000183.pool.root.1
[2026-03-12 23:00:35] -rw-r--r-- 2 boinc boinc    597955 Mar 12 21:38 input.tar.gz
[2026-03-12 23:00:35] -rw-r--r-- 2 boinc boinc     15845 Mar 12 21:38 start_atlas.sh
[2026-03-12 23:00:35] drwxrwx--x 2 boinc boinc      4096 Mar 12 21:38 shared
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc         0 Mar 12 21:38 boinc_setup_complete
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc      6379 Mar 12 21:38 init_data.xml
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc         0 Mar 12 21:38 boinc_lockfile
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc      2562 Mar 12 21:38 pandaJob.out
[2026-03-12 23:00:35] -rw------- 1 boinc boinc   1006522 Mar 12 21:39 agis_schedconf.cvmfs.json
[2026-03-12 23:00:35] -rw------- 1 boinc boinc   1511578 Mar 12 21:39 agis_ddmendpoints.agis.ALL.json
[2026-03-12 23:00:35] -rw------- 1 boinc boinc       431 Mar 12 21:39 workernode_map.json
[2026-03-12 23:00:35] drwx------ 5 boinc boinc      4096 Mar 12 21:39 pilot3
[2026-03-12 23:00:35] -rw------- 1 boinc boinc 212068851 Mar 12 22:59 HITS.48838586._004532.pool.root.1
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc       529 Mar 12 22:59 boinc_task_state.xml
[2026-03-12 23:00:35] -rw------- 1 boinc boinc      1022 Mar 12 22:59 memory_monitor_summary.json
[2026-03-12 23:00:35] -rw------- 1 boinc boinc    262995 Mar 12 23:00 log.48838586._004532.job.log.tgz.1
[2026-03-12 23:00:35] -rw------- 1 boinc boinc      6328 Mar 12 23:00 heartbeat.json
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc        27 Mar 12 23:00 wrapper_checkpoint.txt
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc      8192 Mar 12 23:00 boinc_mmap_file
[2026-03-12 23:00:35] -rw------- 1 boinc boinc       747 Mar 12 23:00 pilotlog.txt
[2026-03-12 23:00:35] -rw------- 1 boinc boinc        95 Mar 12 23:00 pilot_heartbeat.json
[2026-03-12 23:00:35] -rw------- 1 boinc boinc    712619 Mar 12 23:00 log.48838586._004532.job.log.1
[2026-03-12 23:00:35] -rw------- 1 boinc boinc       357 Mar 12 23:00 output.list
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc       620 Mar 12 23:00 runtime_log
[2026-03-12 23:00:35] -rw------- 1 boinc boinc    993280 Mar 12 23:00 result.tar.gz
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc      8916 Mar 12 23:00 runtime_log.err
[2026-03-12 23:00:35] -rw------- 1 boinc boinc       661 Mar 12 23:00 VYhNDmLRrH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmICHLDmB2bbpm.diag
[2026-03-12 23:00:35] -rw-r--r-- 1 boinc boinc     10800 Mar 12 23:00 stderr.txt
[2026-03-12 23:00:35] HITS file was successfully produced:
[2026-03-12 23:00:35] -rw------- 1 boinc boinc 212068851 Mar 12 22:59 shared/HITS.pool.root.1
[2026-03-12 23:00:35]  *** Contents of shared directory: ***
[2026-03-12 23:00:35] total 478844
[2026-03-12 23:00:35] -rw-r--r-- 2 boinc boinc 276643871 Mar 12 21:38 ATLAS.root_0
[2026-03-12 23:00:35] -rw-r--r-- 2 boinc boinc    597955 Mar 12 21:38 input.tar.gz
[2026-03-12 23:00:35] -rw-r--r-- 2 boinc boinc     15845 Mar 12 21:38 start_atlas.sh
[2026-03-12 23:00:35] -rw------- 1 boinc boinc 212068851 Mar 12 22:59 HITS.pool.root.1
[2026-03-12 23:00:35] -rw------- 1 boinc boinc    993280 Mar 12 23:00 result.tar.gz
23:00:37 (1198626): run_atlas exited; CPU time 18314.704791
23:00:37 (1198626): called boinc_finish(0)

</stderr_txt>
]]>

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