Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:15:33 (2460719): wrapper (7.7.26015): starting
04:15:33 (2460719): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 04:15:33] Arguments: --nthreads 8
[2026-03-12 04:15:33] Threads: 8
[2026-03-12 04:15:33] Checking for CVMFS
[2026-03-12 04:15:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 04:15:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 04:15:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 04:15:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 04:15:35] 2.13.3.0 11285 182392 270028 157189 3 353 28304610 32935936 47528 16776704 0 996630708 99.540 1235700683 35915 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 04:15:35] CVMFS is ok
[2026-03-12 04:15:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 04:15:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 04:15:35] Further information can be found at the LHC@home message board.
[2026-03-12 04:15:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 04:15:35] Checking for apptainer binary...
[2026-03-12 04:15:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 04:15:35] Running /usr/bin/apptainer --version
[2026-03-12 04:15:35] apptainer version 1.4.5-2.el9
[2026-03-12 04:15:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 04:15:35] c7-3-29.aglt2.org
[2026-03-12 04:15:35] apptainer works
[2026-03-12 04:15:35] Set ATHENA_PROC_NUMBER=8
[2026-03-12 04:15:35] Set ATHENA_CORE_NUMBER=8
[2026-03-12 04:15:35] Starting ATLAS job with PandaID=7037108458
[2026-03-12 04:15:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 12:07:00]  *** The last 200 lines of the pilot log: ***
[2026-03-12 12:07:00] 2026-03-12 16:05:54,615 | INFO     | job 7037108458 has finished - writing final server update
[2026-03-12 12:07:00] 2026-03-12 16:05:54,615 | INFO     | total number of processed events: 400 (read)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,631 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7037108458/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,632 | INFO     | extracted standard info from prmon json
[2026-03-12 12:07:00] 2026-03-12 16:05:54,632 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 12:07:00] 2026-03-12 16:05:54,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 12:07:00] 2026-03-12 16:05:54,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 12:07:00] 2026-03-12 16:05:54,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 12:07:00] 2026-03-12 16:05:54,639 | INFO     | fitting pss+swap vs Time
[2026-03-12 12:07:00] 2026-03-12 16:05:54,640 | INFO     | sum of square deviations: 30577875409.551994
[2026-03-12 12:07:00] 2026-03-12 16:05:54,644 | INFO     | sum of deviations: 67725831450.62983
[2026-03-12 12:07:00] 2026-03-12 16:05:54,644 | INFO     | mean x: 1773317456.564935
[2026-03-12 12:07:00] 2026-03-12 16:05:54,644 | INFO     | mean y: 2510681.162337662
[2026-03-12 12:07:00] 2026-03-12 16:05:54,644 | INFO     | intersect: -3925146082.5335274
[2026-03-12 12:07:00] 2026-03-12 16:05:54,645 | INFO     | chi2: 2.153805948926288
[2026-03-12 12:07:00] 2026-03-12 16:05:54,646 | INFO     | sum of square deviations: 29595782393.159668
[2026-03-12 12:07:00] 2026-03-12 16:05:54,651 | INFO     | sum of deviations: 96090060867.85336
[2026-03-12 12:07:00] 2026-03-12 16:05:54,651 | INFO     | mean x: 1773317304.0634573
[2026-03-12 12:07:00] 2026-03-12 16:05:54,651 | INFO     | mean y: 2515045.763676149
[2026-03-12 12:07:00] 2026-03-12 16:05:54,652 | INFO     | intersect: -5755000177.920985
[2026-03-12 12:07:00] 2026-03-12 16:05:54,652 | INFO     | chi2: 1.4619414299069418
[2026-03-12 12:07:00] 2026-03-12 16:05:54,652 | INFO     | current chi2=1.4619414299069418 (change=32.12288086418618 %)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,652 | INFO     | sum of square deviations: 28634889467.504417
[2026-03-12 12:07:00] 2026-03-12 16:05:54,656 | INFO     | sum of deviations: 94621245979.99118
[2026-03-12 12:07:00] 2026-03-12 16:05:54,656 | INFO     | mean x: 1773317151.557522
[2026-03-12 12:07:00] 2026-03-12 16:05:54,656 | INFO     | mean y: 2514812.634955752
[2026-03-12 12:07:00] 2026-03-12 16:05:54,656 | INFO     | intersect: -5857241642.457277
[2026-03-12 12:07:00] 2026-03-12 16:05:54,657 | INFO     | chi2: 1.4620779009088491
[2026-03-12 12:07:00] 2026-03-12 16:05:54,657 | INFO     | current chi2=1.4620779009088491 (change=-0.009334915826010686 %)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,657 | INFO     | right removable region: 451
[2026-03-12 12:07:00] 2026-03-12 16:05:54,657 | INFO     | sum of square deviations: 29595792032.030674
[2026-03-12 12:07:00] 2026-03-12 16:05:54,661 | INFO     | sum of deviations: -1927427987.3697777
[2026-03-12 12:07:00] 2026-03-12 16:05:54,661 | INFO     | mean x: 1773317609.0656455
[2026-03-12 12:07:00] 2026-03-12 16:05:54,661 | INFO     | mean y: 2521442.7789934357
[2026-03-12 12:07:00] 2026-03-12 16:05:54,661 | INFO     | intersect: 118008873.77964525
[2026-03-12 12:07:00] 2026-03-12 16:05:54,662 | INFO     | chi2: 0.7524920035811087
[2026-03-12 12:07:00] 2026-03-12 16:05:54,662 | INFO     | current chi2=0.7524920035811087 (change=65.06221909377491 %)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,662 | INFO     | sum of square deviations: 28634992743.139225
[2026-03-12 12:07:00] 2026-03-12 16:05:54,668 | INFO     | sum of deviations: 6443117253.110611
[2026-03-12 12:07:00] 2026-03-12 16:05:54,668 | INFO     | mean x: 1773317761.5641594
[2026-03-12 12:07:00] 2026-03-12 16:05:54,668 | INFO     | mean y: 2520105.6858407077
[2026-03-12 12:07:00] 2026-03-12 16:05:54,669 | INFO     | intersect: -396491494.1169584
[2026-03-12 12:07:00] 2026-03-12 16:05:54,669 | INFO     | chi2: 0.7236921412493224
[2026-03-12 12:07:00] 2026-03-12 16:05:54,669 | INFO     | current chi2=0.7236921412493224 (change=3.8272649004544657 %)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,669 | INFO     | left removable region: 20
[2026-03-12 12:07:00] 2026-03-12 16:05:54,670 | INFO     | sum of square deviations: 24826320855.5498
[2026-03-12 12:07:00] 2026-03-12 16:05:54,674 | INFO     | sum of deviations: 30052167995.69146
[2026-03-12 12:07:00] 2026-03-12 16:05:54,674 | INFO     | mean x: 1773317731.0580046
[2026-03-12 12:07:00] 2026-03-12 16:05:54,674 | INFO     | mean y: 2525198.2923433874
[2026-03-12 12:07:00] 2026-03-12 16:05:54,674 | INFO     | intersect: -2144069243.694029
[2026-03-12 12:07:00] 2026-03-12 16:05:54,675 | INFO     | chi2: 0.0025847749848236243
[2026-03-12 12:07:00] 2026-03-12 16:05:54,675 | INFO     | current memory leak: 1.21 B/s (using 431 data points, chi2=0.00)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | could have reported an average CPU frequency of 3148 MHz (19 samples)
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | ..............................
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . Timing measurements:
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . get job = 0 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . initial setup = 10 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . payload setup = 10 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . stage-in = 0 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . payload execution = 28157 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . stage-out = 3 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | . log creation = 0 s
[2026-03-12 12:07:00] 2026-03-12 16:05:54,676 | INFO     | ..............................
[2026-03-12 12:07:00] 2026-03-12 16:05:55,211 | INFO     | 
[2026-03-12 12:07:00] 2026-03-12 16:05:55,211 | INFO     | job summary report
[2026-03-12 12:07:00] 2026-03-12 16:05:55,211 | INFO     | --------------------------------------------------
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | PanDA job id: 7037108458
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | task id: 48838586
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | errors: (none)
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | pilot state: finished 
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | transexitcode: 0
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | exeerrorcode: 0
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | exeerrordiag: 
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | exitcode: 0
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | exitmsg: OK
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | cpuconsumptiontime: 37760 s
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | nevents: 400
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | neventsw: 0
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | pid: 2472446
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | pgrp: 2472446
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | corecount: 8
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | event service: False
[2026-03-12 12:07:00] 2026-03-12 16:05:55,212 | INFO     | sizes: {0: 2279095, 1: 2280213, 12: 2280213, 28172: 2317825, 28176: 2326823, 28177: 2326879, 28180: 2327201}
[2026-03-12 12:07:00] 2026-03-12 16:05:55,213 | INFO     | --------------------------------------------------
[2026-03-12 12:07:00] 2026-03-12 16:05:55,213 | INFO     | 
[2026-03-12 12:07:00] 2026-03-12 16:05:55,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 12:07:00] 2026-03-12 16:05:55,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 12:07:00] 2026-03-12 16:05:55,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 12:07:00] 2026-03-12 16:05:55,368 | INFO     | job 7037108458 has completed (purged errors)
[2026-03-12 12:07:00] 2026-03-12 16:05:55,368 | INFO     | overall cleanup function is called
[2026-03-12 12:07:00] 2026-03-12 16:05:56,387 | INFO     | --- collectZombieJob: --- 10, [2472446]
[2026-03-12 12:07:00] 2026-03-12 16:05:56,387 | INFO     | zombie collector waiting for pid 2472446
[2026-03-12 12:07:00] 2026-03-12 16:05:56,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 12:07:00] 2026-03-12 16:05:56,388 | INFO     | collected zombie processes
[2026-03-12 12:07:00] 2026-03-12 16:05:56,388 | INFO     | will attempt to kill all subprocesses of pid=2472446
[2026-03-12 12:07:00] 2026-03-12 16:05:56,488 | INFO     | PID=2465264 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 12:07:00] 2026-03-12 16:05:56,488 | INFO     | .. there are 66 such processes running
[2026-03-12 12:07:00] 2026-03-12 16:05:57,528 | INFO     | process IDs to be killed: [2472446] (in reverse order)
[2026-03-12 12:07:00] 2026-03-12 16:05:58,142 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 12:07:00] 2026-03-12 16:05:58,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 12:07:00] 2026-03-12 16:05:58,187 | INFO     | did not find any defunct processes belonging to 2472446
[2026-03-12 12:07:00] 2026-03-12 16:05:58,211 | INFO     | did not find any defunct processes belonging to 2472446
[2026-03-12 12:07:00] 2026-03-12 16:05:58,211 | INFO     | ready for new job
[2026-03-12 12:07:00] 2026-03-12 16:05:58,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 12:07:00] 2026-03-12 16:05:58,213 | INFO     | **************************************
[2026-03-12 12:07:00] 2026-03-12 16:05:58,213 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 12:07:00] 2026-03-12 16:05:58,214 | INFO     | **************************************
[2026-03-12 12:07:00] 2026-03-12 16:05:58,214 | INFO     | 
[2026-03-12 12:07:00] 2026-03-12 16:05:58,218 | INFO     | architecture information:
[2026-03-12 12:07:00] 2026-03-12 16:05:58,218 | INFO     | executing command: cat /etc/os-release
[2026-03-12 12:07:00] 2026-03-12 16:05:58,240 | INFO     | cat /etc/os-release:
[2026-03-12 12:07:00] NAME="CentOS Linux"
[2026-03-12 12:07:00] VERSION="7 (Core)"
[2026-03-12 12:07:00] ID="centos"
[2026-03-12 12:07:00] ID_LIKE="rhel fedora"
[2026-03-12 12:07:00] VERSION_ID="7"
[2026-03-12 12:07:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 12:07:00] ANSI_COLOR="0;31"
[2026-03-12 12:07:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 12:07:00] HOME_URL="https://www.centos.org/"
[2026-03-12 12:07:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 12:07:00] 
[2026-03-12 12:07:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 12:07:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 12:07:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 12:07:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 12:07:00] 
[2026-03-12 12:07:00] 2026-03-12 16:05:58,241 | INFO     | **************************************
[2026-03-12 12:07:00] 2026-03-12 16:05:58,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 12:07:00] 2026-03-12 16:05:58,910 | INFO     | sufficient remaining disk space (73223110656 B)
[2026-03-12 12:07:00] 2026-03-12 16:05:58,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 12:07:00] 2026-03-12 16:05:58,910 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 12:07:00] 2026-03-12 16:05:58,911 | INFO     | update_server=False
[2026-03-12 12:07:00] 2026-03-12 16:05:58,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 12:07:00] 2026-03-12 16:05:58,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 12:07:00] 2026-03-12 16:05:58,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 12:07:00] 2026-03-12 16:05:58,931 | INFO     | aborting loop
[2026-03-12 12:07:00] 2026-03-12 16:05:59,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 12:07:00] 2026-03-12 16:05:59,586 | INFO     | all payload control threads have been joined
[2026-03-12 12:07:00] 2026-03-12 16:05:59,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 12:07:00] 2026-03-12 16:05:59,899 | INFO     | all data control threads have been joined
[2026-03-12 12:07:00] 2026-03-12 16:05:59,935 | INFO     | [job] retrieve thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:05:59,949 | INFO     | [job] job monitor thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,049 | INFO     | all job control threads have been joined
[2026-03-12 12:07:00] 2026-03-12 16:06:00,067 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,068 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,068 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,348 | INFO     | [payload] failed_post thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,496 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,592 | INFO     | [payload] control thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,844 | INFO     | [job] queue monitor thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,905 | INFO     | [data] control thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:00,949 | INFO     | [payload] validate_post thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:01,055 | INFO     | [job] control thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:01,069 | INFO     | [data] copytool_out thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:01,125 | INFO     | [data] copytool_in thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:01,376 | INFO     | [job] validate thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:02,968 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 12:07:00] 2026-03-12 16:06:30,020 | INFO     | PID=2465264 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 12:07:00] 2026-03-12 16:06:30,020 | INFO     | .. there are 66 such processes running
[2026-03-12 12:07:00] 2026-03-12 16:06:30,020 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 12:07:00] 2026-03-12 16:06:30,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 12:07:00] 2026-03-12 16:06:30,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 12:07:00] 2026-03-12 16:06:51,844 | INFO     | [monitor] cgroup control has ended
[2026-03-12 12:07:00] 2026-03-12 16:06:53,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138444851008)>', '<ExcThread(monitor, started 140138088732416)>']
[2026-03-12 12:07:00] 2026-03-12 16:06:54,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 12:07:00] 2026-03-12 16:06:54,199 | INFO     | [monitor] control thread has ended
[2026-03-12 12:07:00] 2026-03-12 16:06:58,614 | INFO     | all workflow threads have been joined
[2026-03-12 12:07:00] 2026-03-12 16:06:58,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 12:07:00] 2026-03-12 16:06:58,615 | INFO     | traces error code: 0
[2026-03-12 12:07:00] 2026-03-12 16:06:58,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 12:07:00] 2026-03-12 16:06:59,181 [wrapper] ==== pilot stdout END ====
[2026-03-12 12:07:00] 2026-03-12 16:06:59,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 12:07:00] 2026-03-12 16:06:59,261 [wrapper] pilotpid: 2465264
[2026-03-12 12:07:00] 2026-03-12 16:06:59,302 [wrapper] Pilot exit status: 0
[2026-03-12 12:07:00] 2026-03-12 16:06:59,430 [wrapper] pandaids: 7037108458
[2026-03-12 12:07:00] 2026-03-12 16:06:59,623 [wrapper] cleanup supervisor_pilot  734157 2465265
[2026-03-12 12:07:00] 2026-03-12 16:06:59,636 [wrapper] Test setup, not cleaning
[2026-03-12 12:07:00] 2026-03-12 16:06:59,653 [wrapper] apfmon messages muted
[2026-03-12 12:07:00] 2026-03-12 16:06:59,679 [wrapper] ==== wrapper stdout END ====
[2026-03-12 12:07:00] 2026-03-12 16:06:59,753 [wrapper] ==== wrapper stderr END ====
[2026-03-12 12:07:00]  *** Error codes and diagnostics ***
[2026-03-12 12:07:00]     "exeErrorCode": 0,
[2026-03-12 12:07:00]     "exeErrorDiag": "",
[2026-03-12 12:07:00]     "pilotErrorCode": 0,
[2026-03-12 12:07:00]     "pilotErrorDiag": "",
[2026-03-12 12:07:00]  *** Listing of results directory ***
[2026-03-12 12:07:00] total 490112
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 21:44 queuedata.json
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 21:44 pilot3.tar.gz
[2026-03-12 12:07:00] -rwx------. 1 boincer umatlas     36322 Mar  3 21:45 runpilot2-wrapper.sh
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas       100 Mar 12 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 12:07:00] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 04:15 run_atlas
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas       105 Mar 12 04:15 job.xml
[2026-03-12 12:07:00] -rw-r--r--. 2 boincer umatlas 276961079 Mar 12 04:15 EVNT.48220221._000197.pool.root.1
[2026-03-12 12:07:00] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 04:15 start_atlas.sh
[2026-03-12 12:07:00] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 04:15 shared
[2026-03-12 12:07:00] -rw-r--r--. 2 boincer umatlas    597961 Mar 12 04:15 input.tar.gz
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas         0 Mar 12 04:15 boinc_lockfile
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas      2562 Mar 12 04:15 pandaJob.out
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas        57 Mar 12 04:15 setup.sh.local
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas   1006243 Mar 12 04:15 agis_schedconf.cvmfs.json
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas       429 Mar 12 04:16 workernode_map.json
[2026-03-12 12:07:00] drwx------. 5 boincer umatlas      4096 Mar 12 04:16 pilot3
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas      6946 Mar 12 12:01 init_data.xml
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas 212397326 Mar 12 12:04 HITS.48838586._004891.pool.root.1
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas       530 Mar 12 12:04 boinc_task_state.xml
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas      1048 Mar 12 12:05 memory_monitor_summary.json
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas   1511578 Mar 12 12:05 agis_ddmendpoints.agis.ALL.json
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas    649970 Mar 12 12:05 log.48838586._004891.job.log.tgz.1
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas        95 Mar 12 12:05 pilot_heartbeat.json
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas      6341 Mar 12 12:05 heartbeat.json
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas        28 Mar 12 12:06 wrapper_checkpoint.txt
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 12:06 boinc_mmap_file
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas      4820 Mar 12 12:06 pilotlog.txt
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas   3646430 Mar 12 12:06 log.48838586._004891.job.log.1
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas       357 Mar 12 12:06 output.list
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas       620 Mar 12 12:07 runtime_log
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas   4311040 Mar 12 12:07 result.tar.gz
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas      9337 Mar 12 12:07 runtime_log.err
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas       662 Mar 12 12:07 7G1NDmgPrH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmo8ILDmWogdbm.diag
[2026-03-12 12:07:00] -rw-r--r--. 1 boincer umatlas     10302 Mar 12 12:07 stderr.txt
[2026-03-12 12:07:00] HITS file was successfully produced:
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas 212397326 Mar 12 12:04 shared/HITS.pool.root.1
[2026-03-12 12:07:00]  *** Contents of shared directory: ***
[2026-03-12 12:07:00] total 482708
[2026-03-12 12:07:00] -rw-r--r--. 2 boincer umatlas 276961079 Mar 12 04:15 ATLAS.root_0
[2026-03-12 12:07:00] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 04:15 start_atlas.sh
[2026-03-12 12:07:00] -rw-r--r--. 2 boincer umatlas    597961 Mar 12 04:15 input.tar.gz
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas 212397326 Mar 12 12:04 HITS.pool.root.1
[2026-03-12 12:07:00] -rw-------. 1 boincer umatlas   4311040 Mar 12 12:07 result.tar.gz
12:07:01 (2460719): run_atlas exited; CPU time 39270.635510
12:07:01 (2460719): called boinc_finish(0)

</stderr_txt>
]]>

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