Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:18:22 (9887): wrapper (7.7.26015): starting
18:18:22 (9887): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 18:18:22] Arguments: --nthreads 8
[2026-03-12 18:18:22] Threads: 8
[2026-03-12 18:18:22] Checking for CVMFS
[2026-03-12 18:18:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 18:18:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 18:18:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 18:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 18:18:23] 2.11.2.0 10929 124967 132024 157210 1 118 15606284 25165824 668 130560 158 39192289 99.848 21717089 776 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 18:18:23] CVMFS is ok
[2026-03-12 18:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 18:18:23] Checking for apptainer binary...
[2026-03-12 18:18:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 18:18:23] Running /usr/bin/apptainer --version
[2026-03-12 18:18:23] apptainer version 1.3.2-1.el7
[2026-03-12 18:18:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 18:18:25] cg-vwn424.simple-grid.lan
[2026-03-12 18:18:25] apptainer works
[2026-03-12 18:18:25] Set ATHENA_PROC_NUMBER=8
[2026-03-12 18:18:25] Set ATHENA_CORE_NUMBER=8
[2026-03-12 18:18:25] Starting ATLAS job with PandaID=7037099503
[2026-03-12 18:18:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 23:15:36]  *** The last 200 lines of the pilot log: ***
[2026-03-12 23:15:36] 2026-03-12 22:14:45,681 | INFO     | log transfer has been attempted: DONE
[2026-03-12 23:15:36] 2026-03-12 22:14:45,681 | INFO     | job 7037099503 has finished - writing final server update
[2026-03-12 23:15:36] 2026-03-12 22:14:45,681 | INFO     | total number of processed events: 400 (read)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,684 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7037099503/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,684 | INFO     | extracted standard info from prmon json
[2026-03-12 23:15:36] 2026-03-12 22:14:45,685 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 23:15:36] 2026-03-12 22:14:45,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 23:15:36] 2026-03-12 22:14:45,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 23:15:36] 2026-03-12 22:14:45,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 23:15:36] 2026-03-12 22:14:45,691 | INFO     | fitting pss+swap vs Time
[2026-03-12 23:15:36] 2026-03-12 22:14:45,692 | INFO     | sum of square deviations: 7641036290.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,695 | INFO     | sum of deviations: -57157847351.000015
[2026-03-12 23:15:36] 2026-03-12 22:14:45,695 | INFO     | mean x: 1773344800.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,696 | INFO     | mean y: 2581330.0240549827
[2026-03-12 23:15:36] 2026-03-12 22:14:45,696 | INFO     | intersect: 13267872519.877789
[2026-03-12 23:15:36] 2026-03-12 22:14:45,700 | INFO     | chi2: 2.6408364867520886
[2026-03-12 23:15:36] 2026-03-12 22:14:45,701 | INFO     | sum of square deviations: 7253894147.5
[2026-03-12 23:15:36] 2026-03-12 22:14:45,704 | INFO     | sum of deviations: -36336111224.500015
[2026-03-12 23:15:36] 2026-03-12 22:14:45,704 | INFO     | mean x: 1773344647.5
[2026-03-12 23:15:36] 2026-03-12 22:14:45,704 | INFO     | mean y: 2589423.8776223776
[2026-03-12 23:15:36] 2026-03-12 22:14:45,704 | INFO     | intersect: 8885604124.766151
[2026-03-12 23:15:36] 2026-03-12 22:14:45,705 | INFO     | chi2: 1.8773285578783445
[2026-03-12 23:15:36] 2026-03-12 22:14:45,705 | INFO     | current chi2=1.8773285578783445 (change=28.911594212815768 %)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,706 | INFO     | sum of square deviations: 6880054580.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,709 | INFO     | sum of deviations: -35549930994.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,709 | INFO     | mean x: 1773344495.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,709 | INFO     | mean y: 2589744.615658363
[2026-03-12 23:15:36] 2026-03-12 22:14:45,709 | INFO     | intersect: 9165638335.698168
[2026-03-12 23:15:36] 2026-03-12 22:14:45,710 | INFO     | chi2: 1.8756400961147728
[2026-03-12 23:15:36] 2026-03-12 22:14:45,710 | INFO     | current chi2=1.8756400961147728 (change=0.08993959829173132 %)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,710 | INFO     | right removable region: 280
[2026-03-12 23:15:36] 2026-03-12 22:14:45,710 | INFO     | sum of square deviations: 7253894147.5
[2026-03-12 23:15:36] 2026-03-12 22:14:45,714 | INFO     | sum of deviations: -106179564417.00002
[2026-03-12 23:15:36] 2026-03-12 22:14:45,714 | INFO     | mean x: 1773344952.5
[2026-03-12 23:15:36] 2026-03-12 22:14:45,714 | INFO     | mean y: 2600500.006993007
[2026-03-12 23:15:36] 2026-03-12 22:14:45,714 | INFO     | intersect: 25960105639.839966
[2026-03-12 23:15:36] 2026-03-12 22:14:45,715 | INFO     | chi2: 1.0626372630466026
[2026-03-12 23:15:36] 2026-03-12 22:14:45,715 | INFO     | current chi2=1.0626372630466026 (change=59.761338182905874 %)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,715 | INFO     | sum of square deviations: 6880054580.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,718 | INFO     | sum of deviations: -103446987372.00006
[2026-03-12 23:15:36] 2026-03-12 22:14:45,719 | INFO     | mean x: 1773345105.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,719 | INFO     | mean y: 2599364.868327402
[2026-03-12 23:15:36] 2026-03-12 22:14:45,719 | INFO     | intersect: 26666226309.980896
[2026-03-12 23:15:36] 2026-03-12 22:14:45,720 | INFO     | chi2: 1.049611046676925
[2026-03-12 23:15:36] 2026-03-12 22:14:45,720 | INFO     | current chi2=1.049611046676925 (change=1.2258384702538159 %)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,720 | INFO     | left removable region: 20
[2026-03-12 23:15:36] 2026-03-12 22:14:45,720 | INFO     | sum of square deviations: 5449944045.0
[2026-03-12 23:15:36] 2026-03-12 22:14:45,723 | INFO     | sum of deviations: -64264491860.00003
[2026-03-12 23:15:36] 2026-03-12 22:14:45,723 | INFO     | mean x: 1773345074.5
[2026-03-12 23:15:36] 2026-03-12 22:14:45,723 | INFO     | mean y: 2601201.2461538464
[2026-03-12 23:15:36] 2026-03-12 22:14:45,724 | INFO     | intersect: 20913480132.14652
[2026-03-12 23:15:36] 2026-03-12 22:14:45,724 | INFO     | chi2: 0.2476729682322065
[2026-03-12 23:15:36] 2026-03-12 22:14:45,724 | INFO     | current memory leak: -11.79 B/s (using 260 data points, chi2=0.25)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,725 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-12 23:15:36] 2026-03-12 22:14:45,725 | INFO     | ..............................
[2026-03-12 23:15:36] 2026-03-12 22:14:45,725 | INFO     | . Timing measurements:
[2026-03-12 23:15:36] 2026-03-12 22:14:45,725 | INFO     | . get job = 0 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | . initial setup = 9 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | . payload setup = 10 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | . stage-in = 0 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | . payload execution = 17729 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | . stage-out = 4 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | . log creation = 0 s
[2026-03-12 23:15:36] 2026-03-12 22:14:45,726 | INFO     | ..............................
[2026-03-12 23:15:36] 2026-03-12 22:14:46,080 | INFO     | 
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | job summary report
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | --------------------------------------------------
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | PanDA job id: 7037099503
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | task id: 48841995
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | errors: (none)
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | pilot state: finished 
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | transexitcode: 0
[2026-03-12 23:15:36] 2026-03-12 22:14:46,081 | INFO     | exeerrorcode: 0
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | exeerrordiag: 
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | exitcode: 0
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | exitmsg: OK
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | cpuconsumptiontime: 82336 s
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | nevents: 400
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | neventsw: 0
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | pid: 18224
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | pgrp: 18224
[2026-03-12 23:15:36] 2026-03-12 22:14:46,082 | INFO     | corecount: 8
[2026-03-12 23:15:36] 2026-03-12 22:14:46,083 | INFO     | event service: False
[2026-03-12 23:15:36] 2026-03-12 22:14:46,083 | INFO     | sizes: {0: 2278994, 1: 2280112, 2: 2280112, 17743: 2312274, 17744: 2312273, 17748: 2321327, 17750: 2321511, 17751: 2321705}
[2026-03-12 23:15:36] 2026-03-12 22:14:46,083 | INFO     | --------------------------------------------------
[2026-03-12 23:15:36] 2026-03-12 22:14:46,083 | INFO     | 
[2026-03-12 23:15:36] 2026-03-12 22:14:46,083 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-12 23:15:36] 2026-03-12 22:14:46,130 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | job 7037099503 has completed (purged errors)
[2026-03-12 23:15:36] 2026-03-12 22:14:46,133 | INFO     | overall cleanup function is called
[2026-03-12 23:15:36] 2026-03-12 22:14:47,142 | INFO     | --- collectZombieJob: --- 10, [18224]
[2026-03-12 23:15:36] 2026-03-12 22:14:47,142 | INFO     | zombie collector waiting for pid 18224
[2026-03-12 23:15:36] 2026-03-12 22:14:47,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 23:15:36] 2026-03-12 22:14:47,143 | INFO     | collected zombie processes
[2026-03-12 23:15:36] 2026-03-12 22:14:47,143 | INFO     | will attempt to kill all subprocesses of pid=18224
[2026-03-12 23:15:36] 2026-03-12 22:14:47,227 | INFO     | process IDs to be killed: [18224] (in reverse order)
[2026-03-12 23:15:36] 2026-03-12 22:14:48,064 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 23:15:36] 2026-03-12 22:14:48,064 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 23:15:36] 2026-03-12 22:14:48,066 | INFO     | did not find any defunct processes belonging to 18224
[2026-03-12 23:15:36] 2026-03-12 22:14:48,068 | INFO     | did not find any defunct processes belonging to 18224
[2026-03-12 23:15:36] 2026-03-12 22:14:48,068 | INFO     | ready for new job
[2026-03-12 23:15:36] 2026-03-12 22:14:48,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 23:15:36] 2026-03-12 22:14:48,071 | INFO     | **************************************
[2026-03-12 23:15:36] 2026-03-12 22:14:48,071 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 23:15:36] 2026-03-12 22:14:48,071 | INFO     | **************************************
[2026-03-12 23:15:36] 2026-03-12 22:14:48,071 | INFO     | 
[2026-03-12 23:15:36] 2026-03-12 22:14:48,072 | INFO     | pilot is running in a VM
[2026-03-12 23:15:36] 2026-03-12 22:14:48,072 | INFO     | architecture information:
[2026-03-12 23:15:36] 2026-03-12 22:14:48,076 | INFO     | executing command: cat /etc/os-release
[2026-03-12 23:15:36] 2026-03-12 22:14:48,370 | INFO     | cat /etc/os-release:
[2026-03-12 23:15:36] NAME="CentOS Linux"
[2026-03-12 23:15:36] VERSION="7 (Core)"
[2026-03-12 23:15:36] ID="centos"
[2026-03-12 23:15:36] ID_LIKE="rhel fedora"
[2026-03-12 23:15:36] VERSION_ID="7"
[2026-03-12 23:15:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 23:15:36] ANSI_COLOR="0;31"
[2026-03-12 23:15:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 23:15:36] HOME_URL="https://www.centos.org/"
[2026-03-12 23:15:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 23:15:36] 
[2026-03-12 23:15:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 23:15:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 23:15:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 23:15:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 23:15:36] 
[2026-03-12 23:15:36] 2026-03-12 22:14:48,370 | INFO     | **************************************
[2026-03-12 23:15:36] 2026-03-12 22:14:48,873 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-12 23:15:36] 2026-03-12 22:14:49,165 | INFO     | sufficient remaining disk space (495380856832 B)
[2026-03-12 23:15:36] 2026-03-12 22:14:49,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 23:15:36] 2026-03-12 22:14:49,165 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 23:15:36] 2026-03-12 22:14:49,166 | INFO     | update_server=False
[2026-03-12 23:15:36] 2026-03-12 22:14:49,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 23:15:36] 2026-03-12 22:14:49,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:15:36] 2026-03-12 22:14:49,167 | INFO     | aborting loop
[2026-03-12 23:15:36] 2026-03-12 22:14:49,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 23:15:36] 2026-03-12 22:14:49,189 | INFO     | all data control threads have been joined
[2026-03-12 23:15:36] 2026-03-12 22:14:49,586 | INFO     | all payload control threads have been joined
[2026-03-12 23:15:36] 2026-03-12 22:14:50,171 | INFO     | [job] retrieve thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,172 | INFO     | [job] job monitor thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,195 | INFO     | [data] control thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,288 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,428 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,577 | INFO     | all job control threads have been joined
[2026-03-12 23:15:36] 2026-03-12 22:14:50,592 | INFO     | [payload] control thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:50,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:15:36] 2026-03-12 22:14:50,967 | INFO     | [data] copytool_in thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 23:15:36] 2026-03-12 22:14:51,056 | INFO     | [payload] validate_post thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,175 | INFO     | [data] copytool_out thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,298 | INFO     | [payload] failed_post thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,554 | INFO     | [job] validate thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,583 | INFO     | [job] control thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,628 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:51,864 | INFO     | [job] queue monitor thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:14:55,050 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 23:15:36] 2026-03-12 22:15:18,612 | INFO     | PID=13782 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 23:15:36] 2026-03-12 22:15:18,612 | INFO     | .. there are 2 such processes running
[2026-03-12 23:15:36] 2026-03-12 22:15:18,612 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 23:15:36] 2026-03-12 22:15:18,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 23:15:36] 2026-03-12 22:15:18,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 23:15:36] 2026-03-12 22:15:23,568 | INFO     | [monitor] cgroup control has ended
[2026-03-12 23:15:36] 2026-03-12 22:15:25,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957489538880)>', '<ExcThread(monitor, started 139956542502656)>']
[2026-03-12 23:15:36] 2026-03-12 22:15:25,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 23:15:36] 2026-03-12 22:15:25,654 | INFO     | [monitor] control thread has ended
[2026-03-12 23:15:36] 2026-03-12 22:15:30,509 | INFO     | all workflow threads have been joined
[2026-03-12 23:15:36] 2026-03-12 22:15:30,509 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 23:15:36] 2026-03-12 22:15:30,510 | INFO     | traces error code: 0
[2026-03-12 23:15:36] 2026-03-12 22:15:30,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 23:15:36] 2026-03-12 22:15:30,998 [wrapper] ==== pilot stdout END ====
[2026-03-12 23:15:36] 2026-03-12 22:15:31,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 23:15:36] 2026-03-12 22:15:31,254 [wrapper] pilotpid: 13782
[2026-03-12 23:15:36] 2026-03-12 22:15:31,360 [wrapper] Pilot exit status: 0
[2026-03-12 23:15:36] 2026-03-12 22:15:31,929 [wrapper] pandaids: 7037099503
[2026-03-12 23:15:36] 2026-03-12 22:15:33,097 [wrapper] cleanup supervisor_pilot 12657 13783
[2026-03-12 23:15:36] 2026-03-12 22:15:33,233 [wrapper] Test setup, not cleaning
[2026-03-12 23:15:36] 2026-03-12 22:15:33,353 [wrapper] apfmon messages muted
[2026-03-12 23:15:36] 2026-03-12 22:15:33,444 [wrapper] ==== wrapper stdout END ====
[2026-03-12 23:15:36] 2026-03-12 22:15:33,492 [wrapper] ==== wrapper stderr END ====
[2026-03-12 23:15:36]  *** Error codes and diagnostics ***
[2026-03-12 23:15:36]     "exeErrorCode": 0,
[2026-03-12 23:15:36]     "exeErrorDiag": "",
[2026-03-12 23:15:36]     "pilotErrorCode": 0,
[2026-03-12 23:15:36]     "pilotErrorDiag": "",
[2026-03-12 23:15:36]  *** Listing of results directory ***
[2026-03-12 23:15:36] total 583084
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc      5111 Mar  4 03:44 queuedata.json
[2026-03-12 23:15:36] -rwx------. 1 boinc boinc     36322 Mar  4 03:44 runpilot2-wrapper.sh
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc    584627 Mar  4 03:44 pilot3.tar.gz
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc       100 Mar 12 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 23:15:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 18:18 run_atlas
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc       105 Mar 12 18:18 job.xml
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc      6390 Mar 12 18:18 init_data.xml
[2026-03-12 23:15:36] -rw-r--r--. 2 boinc boinc 311843277 Mar 12 18:18 EVNT.48252743._000052.pool.root.1
[2026-03-12 23:15:36] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:18 start_atlas.sh
[2026-03-12 23:15:36] drwxrwx--x. 2 boinc boinc        68 Mar 12 18:18 shared
[2026-03-12 23:15:36] -rw-r--r--. 2 boinc boinc    597949 Mar 12 18:18 input.tar.gz
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc         0 Mar 12 18:18 boinc_lockfile
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc      2492 Mar 12 18:18 pandaJob.out
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc   1006522 Mar 12 18:18 agis_schedconf.cvmfs.json
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc       415 Mar 12 18:18 workernode_map.json
[2026-03-12 23:15:36] drwx------. 5 boinc boinc      4096 Mar 12 18:18 pilot3
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc 275329189 Mar 12 23:13 HITS.48841995._002551.pool.root.1
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc       530 Mar 12 23:13 boinc_task_state.xml
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc        95 Mar 12 23:14 pilot_heartbeat.json
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc      1035 Mar 12 23:14 memory_monitor_summary.json
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc   1511578 Mar 12 23:14 agis_ddmendpoints.agis.ALL.json
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc    507450 Mar 12 23:14 log.48841995._002551.job.log.tgz.1
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc      6319 Mar 12 23:14 heartbeat.json
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc      8192 Mar 12 23:15 boinc_mmap_file
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc        28 Mar 12 23:15 wrapper_checkpoint.txt
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc      4880 Mar 12 23:15 pilotlog.txt
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc   2482212 Mar 12 23:15 log.48841995._002551.job.log.1
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc       357 Mar 12 23:15 output.list
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc       620 Mar 12 23:15 runtime_log
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc   3010560 Mar 12 23:15 result.tar.gz
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc       655 Mar 12 23:15 UagNDmhOrH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmd4ILDm4KwCUo.diag
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc      8816 Mar 12 23:15 runtime_log.err
[2026-03-12 23:15:36] -rw-r--r--. 1 boinc boinc     20720 Mar 12 23:15 stderr.txt
[2026-03-12 23:15:36] HITS file was successfully produced:
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc 275329189 Mar 12 23:13 shared/HITS.pool.root.1
[2026-03-12 23:15:36]  *** Contents of shared directory: ***
[2026-03-12 23:15:36] total 576956
[2026-03-12 23:15:36] -rw-r--r--. 2 boinc boinc 311843277 Mar 12 18:18 ATLAS.root_0
[2026-03-12 23:15:36] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:18 start_atlas.sh
[2026-03-12 23:15:36] -rw-r--r--. 2 boinc boinc    597949 Mar 12 18:18 input.tar.gz
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc 275329189 Mar 12 23:13 HITS.pool.root.1
[2026-03-12 23:15:36] -rw-------. 1 boinc boinc   3010560 Mar 12 23:15 result.tar.gz
23:15:38 (9887): run_atlas exited; CPU time 82495.941041
23:15:38 (9887): called boinc_finish(0)

</stderr_txt>
]]>

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