Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:39:06 (24125): wrapper (7.7.26015): starting
02:39:06 (24125): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 02:39:06] Arguments: --nthreads 12
[2026-03-12 02:39:06] Threads: 12
[2026-03-12 02:39:06] Checking for CVMFS
[2026-03-12 02:39:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 02:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 02:39:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 02:39:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 02:39:06] 2.11.2.0 2925 439973 102008 157186 2 51 13646991 20275201 1 130560 1 190580006 99.953 25356756 17286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 02:39:06] CVMFS is ok
[2026-03-12 02:39:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 02:39:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 02:39:06] Further information can be found at the LHC@home message board.
[2026-03-12 02:39:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 02:39:06] Checking for apptainer binary...
[2026-03-12 02:39:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 02:39:06] Running /usr/bin/apptainer --version
[2026-03-12 02:39:06] apptainer version 1.3.2-1.el7
[2026-03-12 02:39:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 02:39:08] c-205-9.aglt2.org
[2026-03-12 02:39:08] apptainer works
[2026-03-12 02:39:08] Set ATHENA_PROC_NUMBER=12
[2026-03-12 02:39:08] Set ATHENA_CORE_NUMBER=12
[2026-03-12 02:39:08] Starting ATLAS job with PandaID=7037107460
[2026-03-12 02:39:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 04:03:41]  *** The last 200 lines of the pilot log: ***
[2026-03-12 04:03:41]  filesize=393360
[2026-03-12 04:03:41]  filetype=log
[2026-03-12 04:03:41]  guid=452dadf0-2e9b-47b8-ad28-989f7046dfeb
[2026-03-12 04:03:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 04:03:41]  is_altstaged=None
[2026-03-12 04:03:41]  is_tar=False
[2026-03-12 04:03:41]  lfn=log.48838577._010148.job.log.tgz.1
[2026-03-12 04:03:41]  mtime=0
[2026-03-12 04:03:41]  protocol_id=None
[2026-03-12 04:03:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 04:03:41]  replicas=None
[2026-03-12 04:03:41]  scope=mc23_13p6TeV
[2026-03-12 04:03:41]  status=None
[2026-03-12 04:03:41]  status_code=0
[2026-03-12 04:03:41]  storage_token=
[2026-03-12 04:03:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7037107460/log.48838577._010148.job.log.tgz.1
[2026-03-12 04:03:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/bd/log.48838577._010148.job.log.tgz.1
[2026-03-12 04:03:41]  workdir=None
[2026-03-12 04:03:41] ]
[2026-03-12 04:03:41] 2026-03-12 08:02:46,406 | INFO     | transferring file log.48838577._010148.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7037107460/log.48838577._010148.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-12 04:03:41] 2026-03-12 08:02:46,406 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7037107460/log.48838577._010148.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838577._010148.job
[2026-03-12 04:03:41] 2026-03-12 08:02:46,429 | INFO     | adding to output.list: log.48838577._010148.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/bd/log.48838577._010148.job.log.tg
[2026-03-12 04:03:41] 2026-03-12 08:02:46,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 04:03:41] 2026-03-12 08:02:46,430 | INFO     | summary of transferred files:
[2026-03-12 04:03:41] 2026-03-12 08:02:46,430 | INFO     |  -- lfn=log.48838577._010148.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 04:03:41] 2026-03-12 08:02:46,430 | INFO     | stage-out finished correctly
[2026-03-12 04:03:41] 2026-03-12 08:02:47,957 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 04:03:41] 2026-03-12 08:02:48,062 | INFO     | time since job start (5000s) is within the limit (349056.0s)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,382 | INFO     | monitor loop #380: job 0:7037107460 is in state 'finished'
[2026-03-12 04:03:41] 2026-03-12 08:02:48,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,578 | INFO     | job 7037107460 has state=finished
[2026-03-12 04:03:41] 2026-03-12 08:02:48,579 | INFO     | preparing for final server update for job 7037107460 in state='finished'
[2026-03-12 04:03:41] 2026-03-12 08:02:48,579 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037107460/jobReport.json
[2026-03-12 04:03:41] 2026-03-12 08:02:48,582 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 04:03:41] 2026-03-12 08:02:48,582 | INFO     | this job has now completed (state=finished)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,583 | INFO     | log transfer has been attempted: DONE
[2026-03-12 04:03:41] 2026-03-12 08:02:48,583 | INFO     | job 7037107460 has finished - writing final server update
[2026-03-12 04:03:41] 2026-03-12 08:02:48,583 | INFO     | total number of processed events: 400 (read)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,586 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037107460/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,587 | INFO     | extracted standard info from prmon json
[2026-03-12 04:03:41] 2026-03-12 08:02:48,587 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 04:03:41] 2026-03-12 08:02:48,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 04:03:41] 2026-03-12 08:02:48,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 04:03:41] 2026-03-12 08:02:48,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 04:03:41] 2026-03-12 08:02:48,589 | INFO     | fitting pss+swap vs Time
[2026-03-12 04:03:41] 2026-03-12 08:02:48,589 | INFO     | sum of square deviations: 130793150.0
[2026-03-12 04:03:41] 2026-03-12 08:02:48,590 | INFO     | sum of deviations: -6841823562.0
[2026-03-12 04:03:41] 2026-03-12 08:02:48,590 | INFO     | mean x: 1773300155.0
[2026-03-12 04:03:41] 2026-03-12 08:02:48,590 | INFO     | mean y: 2788520.7733333334
[2026-03-12 04:03:41] 2026-03-12 08:02:48,590 | INFO     | intersect: 92764579050.14932
[2026-03-12 04:03:41] 2026-03-12 08:02:48,590 | INFO     | chi2: 0.09379669020803301
[2026-03-12 04:03:41] 2026-03-12 08:02:48,590 | INFO     | current memory leak: -52.31 B/s (using 75 data points, chi2=0.09)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | ..............................
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | . Timing measurements:
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | . get job = 0 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | . initial setup = 7 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | . payload setup = 7 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | . stage-in = 0 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,591 | INFO     | . payload execution = 4973 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,592 | INFO     | . stage-out = 0 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,592 | INFO     | . log creation = 0 s
[2026-03-12 04:03:41] 2026-03-12 08:02:48,592 | INFO     | ..............................
[2026-03-12 04:03:41] 2026-03-12 08:02:49,137 | INFO     | 
[2026-03-12 04:03:41] 2026-03-12 08:02:49,137 | INFO     | job summary report
[2026-03-12 04:03:41] 2026-03-12 08:02:49,137 | INFO     | --------------------------------------------------
[2026-03-12 04:03:41] 2026-03-12 08:02:49,137 | INFO     | PanDA job id: 7037107460
[2026-03-12 04:03:41] 2026-03-12 08:02:49,138 | INFO     | task id: 48838577
[2026-03-12 04:03:41] 2026-03-12 08:02:49,138 | INFO     | errors: (none)
[2026-03-12 04:03:41] 2026-03-12 08:02:49,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 04:03:41] 2026-03-12 08:02:49,138 | INFO     | pilot state: finished 
[2026-03-12 04:03:41] 2026-03-12 08:02:49,138 | INFO     | transexitcode: 0
[2026-03-12 04:03:41] 2026-03-12 08:02:49,138 | INFO     | exeerrorcode: 0
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | exeerrordiag: 
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | exitcode: 0
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | exitmsg: OK
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | cpuconsumptiontime: 54422 s
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | nevents: 400
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | neventsw: 0
[2026-03-12 04:03:41] 2026-03-12 08:02:49,139 | INFO     | pid: 32199
[2026-03-12 04:03:41] 2026-03-12 08:02:49,140 | INFO     | pgrp: 32199
[2026-03-12 04:03:41] 2026-03-12 08:02:49,140 | INFO     | corecount: 12
[2026-03-12 04:03:41] 2026-03-12 08:02:49,140 | INFO     | event service: False
[2026-03-12 04:03:41] 2026-03-12 08:02:49,140 | INFO     | sizes: {0: 2279807, 1: 2280268, 11: 2280268, 4984: 2306519, 4987: 2315517, 4988: 2315573, 4989: 2315895}
[2026-03-12 04:03:41] 2026-03-12 08:02:49,140 | INFO     | --------------------------------------------------
[2026-03-12 04:03:41] 2026-03-12 08:02:49,140 | INFO     | 
[2026-03-12 04:03:41] 2026-03-12 08:02:49,141 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 04:03:41] 2026-03-12 08:02:49,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,166 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,166 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,168 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 04:03:41] 2026-03-12 08:02:49,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,169 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 04:03:41] 2026-03-12 08:02:49,169 | INFO     | job 7037107460 has completed (purged errors)
[2026-03-12 04:03:41] 2026-03-12 08:02:49,169 | INFO     | overall cleanup function is called
[2026-03-12 04:03:41] 2026-03-12 08:02:50,176 | INFO     | --- collectZombieJob: --- 10, [32199]
[2026-03-12 04:03:41] 2026-03-12 08:02:50,176 | INFO     | zombie collector waiting for pid 32199
[2026-03-12 04:03:41] 2026-03-12 08:02:50,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 04:03:41] 2026-03-12 08:02:50,188 | INFO     | collected zombie processes
[2026-03-12 04:03:41] 2026-03-12 08:02:50,188 | INFO     | will attempt to kill all subprocesses of pid=32199
[2026-03-12 04:03:41] 2026-03-12 08:02:50,276 | INFO     | process IDs to be killed: [32199] (in reverse order)
[2026-03-12 04:03:41] 2026-03-12 08:02:50,330 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 04:03:41] 2026-03-12 08:02:50,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 04:03:41] 2026-03-12 08:02:50,334 | INFO     | did not find any defunct processes belonging to 32199
[2026-03-12 04:03:41] 2026-03-12 08:02:50,337 | INFO     | did not find any defunct processes belonging to 32199
[2026-03-12 04:03:41] 2026-03-12 08:02:50,338 | INFO     | ready for new job
[2026-03-12 04:03:41] 2026-03-12 08:02:50,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 04:03:41] 2026-03-12 08:02:50,339 | INFO     | **************************************
[2026-03-12 04:03:41] 2026-03-12 08:02:50,339 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 04:03:41] 2026-03-12 08:02:50,339 | INFO     | **************************************
[2026-03-12 04:03:41] 2026-03-12 08:02:50,340 | INFO     | 
[2026-03-12 04:03:41] 2026-03-12 08:02:50,340 | INFO     | architecture information:
[2026-03-12 04:03:41] 2026-03-12 08:02:50,341 | INFO     | executing command: cat /etc/os-release
[2026-03-12 04:03:41] 2026-03-12 08:02:50,356 | INFO     | cat /etc/os-release:
[2026-03-12 04:03:41] NAME="CentOS Linux"
[2026-03-12 04:03:41] VERSION="7 (Core)"
[2026-03-12 04:03:41] ID="centos"
[2026-03-12 04:03:41] ID_LIKE="rhel fedora"
[2026-03-12 04:03:41] VERSION_ID="7"
[2026-03-12 04:03:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 04:03:41] ANSI_COLOR="0;31"
[2026-03-12 04:03:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 04:03:41] HOME_URL="https://www.centos.org/"
[2026-03-12 04:03:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 04:03:41] 
[2026-03-12 04:03:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 04:03:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 04:03:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 04:03:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 04:03:41] 
[2026-03-12 04:03:41] 2026-03-12 08:02:50,357 | INFO     | **************************************
[2026-03-12 04:03:41] 2026-03-12 08:02:50,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 04:03:41] 2026-03-12 08:02:50,874 | INFO     | sufficient remaining disk space (29164044288 B)
[2026-03-12 04:03:41] 2026-03-12 08:02:50,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 04:03:41] 2026-03-12 08:02:50,875 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 04:03:41] 2026-03-12 08:02:50,875 | INFO     | update_server=False
[2026-03-12 04:03:41] 2026-03-12 08:02:50,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 04:03:41] 2026-03-12 08:02:50,886 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 04:03:41] 2026-03-12 08:02:50,886 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 04:03:41] 2026-03-12 08:02:50,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:03:41] 2026-03-12 08:02:50,886 | INFO     | will abort loop
[2026-03-12 04:03:41] 2026-03-12 08:02:51,201 | INFO     | all data control threads have been joined
[2026-03-12 04:03:41] 2026-03-12 08:02:51,429 | INFO     | all payload control threads have been joined
[2026-03-12 04:03:41] 2026-03-12 08:02:51,876 | INFO     | [job] retrieve thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:51,892 | INFO     | [job] job monitor thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:51,983 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,002 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 04:03:41] 2026-03-12 08:02:52,130 | INFO     | [data] copytool_in thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,202 | INFO     | [data] control thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,342 | INFO     | all job control threads have been joined
[2026-03-12 04:03:41] 2026-03-12 08:02:52,434 | INFO     | [payload] control thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,449 | INFO     | [payload] failed_post thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,808 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:52,831 | INFO     | [job] validate thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:53,348 | INFO     | [job] control thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:53,401 | INFO     | [payload] validate_post thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:53,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:03:41] 2026-03-12 08:02:54,033 | INFO     | [data] copytool_out thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:54,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 04:03:41] 2026-03-12 08:02:54,685 | INFO     | [job] queue monitor thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:02:58,048 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 04:03:41] 2026-03-12 08:03:21,246 | INFO     | PID=27823 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 04:03:41] 2026-03-12 08:03:21,246 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 04:03:41] 2026-03-12 08:03:21,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 04:03:41] 2026-03-12 08:03:21,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 04:03:41] 2026-03-12 08:03:36,244 | INFO     | [monitor] cgroup control has ended
[2026-03-12 04:03:41] 2026-03-12 08:03:36,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629048989504)>', '<ExcThread(monitor, started 140628017010432)>']
[2026-03-12 04:03:41] 2026-03-12 08:03:37,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 04:03:41] 2026-03-12 08:03:37,315 | INFO     | [monitor] control thread has ended
[2026-03-12 04:03:41] 2026-03-12 08:03:41,482 | INFO     | all workflow threads have been joined
[2026-03-12 04:03:41] 2026-03-12 08:03:41,482 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 04:03:41] 2026-03-12 08:03:41,482 | INFO     | traces error code: 0
[2026-03-12 04:03:41] 2026-03-12 08:03:41,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 04:03:41] 2026-03-12 08:03:41,577 [wrapper] ==== pilot stdout END ====
[2026-03-12 04:03:41] 2026-03-12 08:03:41,581 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 04:03:41] 2026-03-12 08:03:41,585 [wrapper] pilotpid: 27823
[2026-03-12 04:03:41] 2026-03-12 08:03:41,589 [wrapper] Pilot exit status: 0
[2026-03-12 04:03:41] 2026-03-12 08:03:41,605 [wrapper] pandaids: 7037107460
[2026-03-12 04:03:41] 2026-03-12 08:03:41,649 [wrapper] cleanup supervisor_pilot 21936 27824
[2026-03-12 04:03:41] 2026-03-12 08:03:41,652 [wrapper] Test setup, not cleaning
[2026-03-12 04:03:41] 2026-03-12 08:03:41,657 [wrapper] apfmon messages muted
[2026-03-12 04:03:41] 2026-03-12 08:03:41,660 [wrapper] ==== wrapper stdout END ====
[2026-03-12 04:03:41] 2026-03-12 08:03:41,664 [wrapper] ==== wrapper stderr END ====
[2026-03-12 04:03:41]  *** Error codes and diagnostics ***
[2026-03-12 04:03:41]     "exeErrorCode": 0,
[2026-03-12 04:03:41]     "exeErrorDiag": "",
[2026-03-12 04:03:41]     "pilotErrorCode": 0,
[2026-03-12 04:03:41]     "pilotErrorDiag": "",
[2026-03-12 04:03:41]  *** Listing of results directory ***
[2026-03-12 04:03:41] total 508448
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 21:44 queuedata.json
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 21:44 pilot3.tar.gz
[2026-03-12 04:03:41] -rwx------ 1 boincer umatlas     36322 Mar  3 21:44 runpilot2-wrapper.sh
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas       100 Mar 12 02:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 04:03:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 02:39 run_atlas
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas       105 Mar 12 02:39 job.xml
[2026-03-12 04:03:41] -rw-r--r-- 2 boincer umatlas 290070852 Mar 12 02:39 EVNT.48220197._000403.pool.root.1
[2026-03-12 04:03:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 02:39 start_atlas.sh
[2026-03-12 04:03:41] drwxrwx--x 2 boincer umatlas      4096 Mar 12 02:39 shared
[2026-03-12 04:03:41] -rw-r--r-- 2 boincer umatlas    597973 Mar 12 02:39 input.tar.gz
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas         0 Mar 12 02:39 boinc_lockfile
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas      2567 Mar 12 02:39 pandaJob.out
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas        57 Mar 12 02:39 setup.sh.local
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas   1006243 Mar 12 02:39 agis_schedconf.cvmfs.json
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas   1511578 Mar 12 02:39 agis_ddmendpoints.agis.ALL.json
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas       444 Mar 12 02:39 workernode_map.json
[2026-03-12 04:03:41] drwx------ 5 boincer umatlas      4096 Mar 12 02:39 pilot3
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas      5952 Mar 12 04:00 init_data.xml
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas       529 Mar 12 04:02 boinc_task_state.xml
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas 224402998 Mar 12 04:02 HITS.48838577._010148.pool.root.1
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas        95 Mar 12 04:02 pilot_heartbeat.json
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas      1045 Mar 12 04:02 memory_monitor_summary.json
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas    393360 Mar 12 04:02 log.48838577._010148.job.log.tgz.1
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas      6414 Mar 12 04:02 heartbeat.json
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 04:03 boinc_mmap_file
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas        27 Mar 12 04:03 wrapper_checkpoint.txt
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas      4928 Mar 12 04:03 pilotlog.txt
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas    723069 Mar 12 04:03 log.48838577._010148.job.log.1
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas       357 Mar 12 04:03 output.list
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas       620 Mar 12 04:03 runtime_log
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas   1136640 Mar 12 04:03 result.tar.gz
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas       658 Mar 12 04:03 s2uKDmPPrH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm18GLDmnIMVwm.diag
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas      9338 Mar 12 04:03 runtime_log.err
[2026-03-12 04:03:41] -rw-r--r-- 1 boincer umatlas     21210 Mar 12 04:03 stderr.txt
[2026-03-12 04:03:41] HITS file was successfully produced:
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas 224402998 Mar 12 04:02 shared/HITS.pool.root.1
[2026-03-12 04:03:41]  *** Contents of shared directory: ***
[2026-03-12 04:03:41] total 504136
[2026-03-12 04:03:41] -rw-r--r-- 2 boincer umatlas 290070852 Mar 12 02:39 ATLAS.root_0
[2026-03-12 04:03:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 02:39 start_atlas.sh
[2026-03-12 04:03:41] -rw-r--r-- 2 boincer umatlas    597973 Mar 12 02:39 input.tar.gz
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas 224402998 Mar 12 04:02 HITS.pool.root.1
[2026-03-12 04:03:41] -rw------- 1 boincer umatlas   1136640 Mar 12 04:03 result.tar.gz
04:03:43 (24125): run_atlas exited; CPU time 54404.033461
04:03:43 (24125): called boinc_finish(0)

</stderr_txt>
]]>

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